Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08690
- Subject:
- NR_146746.1
- Aligned Length:
- 2759
- Identities:
- 1686
- Gaps:
- 1044
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGGTATGGATCCCGGAGCGCGCAGAGGAGTCCCTGAGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTAGGGACCCCAAAGGCCTTTCACCGCTGCGGGCCAGTCCTCAGTCAGCTGGAGGGTGGGTCCCACGGAATCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTTAGTTTCTACCACCTCCTCCCCCTTCTCTGGAGCTGGTGGAGCTTCAGAAGTCCTGTGGAGCGTCGGCTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATCAGTTTGTCTCGGTGAAAAGTAAACTTTGAAAGCACCAGCAAAGTGCCCGAAACATAAGTGTTTAATGTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTTGAAGAATGAATACCTGAGTATCTCTGTTGTGATCTCATATAAAATATGCAGCTTCACTGAATGAGTTCAT 444
Query 1 ------------------ATGGCGT------GCGGCT--------------TTCGCCGC--------------- 21
|||.||| |.|||| ||.|..||
Sbjct 445 AATTTTAAATCTATGGAGATGACGTGGTGTGGTGGCTAAAGGAACTCCATCTTGGATGCTAATCTGCCATGTTG 518
Query 22 GCTATTGCTT---GCCAG--------------CTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGATCACA 78
.||.|||.|| .|||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACTTTTGATTATCCCCAGTTCCAGGAATACCTCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGATCACA 592
Query 79 TCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTATTGGA 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTATTGGA 666
Query 153 AAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGTGATA 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGTGATA 740
Query 227 CAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAAGACA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAAGACA 814
Query 301 GTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCCAGAA 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCCAGAA 888
Query 375 GAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACCATCA 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACCATCA 962
Query 449 TAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGATTGG 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGATTGG 1036
Query 523 GGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATCCTCT 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATCCTCT 1110
Query 597 ACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCAC 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCAC 1184
Query 671 AGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGC 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGC 1258
Query 745 ATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCG 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCG 1332
Query 819 TGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAGAACAATAAAAGGAACGGCTG 892
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1333 TGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTG 1406
Query 893 TAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTAT 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTAT 1480
Query 967 GCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGACAGA 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGACAGA 1554
Query 1041 TAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAAAGGT 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAAAGGT 1628
Query 1115 GCCAGCACGTGCCCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGATGTT 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCCAGCACGTGCCCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGATGTT 1702
Query 1189 TTAAATGAGATTCAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACCCACA 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTAAATGAGATTCAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACCCACA 1776
Query 1263 AGAGACTGCAGAGAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGACTACA 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AGAGACTGCAGAGAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGACTACA 1850
Query 1337 AGTTCAGCTGGGATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCGCCTC 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGTTCAGCTGGGATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCGCCTC 1924
Query 1411 CACAGTTTGG------AAGAGACTTTTGGATGTGGGTACCTGAATGACT-TCAACA------CTGCTTGTTTAC 1471
||||| || ||| |.||..|.||..||.|..||||.|| |.|.|| |||| .|
Sbjct 1925 CACAG---GGATCATCAAG-----TGTGCTTCTGCTTATCAAAATGGCTATTAGCATTTTTGCTGC------CC 1984
Query 1472 A--AGAG-CCACAGTCTGTTTCAAT-----TCTTCAGCAT-----CTTCTC----AGGTTCGACGAGGTGCTTT 1528
| |||| |.|||||| ||.| .||||.||.| |||.|| |||||||||||||||||||
Sbjct 1985 AGTAGAGTCAACAGTC-----CAGTAGCTGCCTTCTGCCTCTAGACTTTTCCCAAAGGTTCGACGAGGTGCTTT 2053
Query 1529 ATAAATCATCTCAGGACTTTCAACCCAGGCATATCGTCAGTTACCTTCTAACTTTAAGTCATCTTGCAGCTGTG 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2054 ATAAATCATCTCAGGACTTTCAACCCAGGCATATCGTCAGTTACCTTCTAACTTTAAGTCATCTTGCAGCTGTG 2127
Query 1603 GCACACAAAACACTACAAATAAAAGATAGTCCTCCTGAAGTGGCTGGGGCCAGACTTCATCTTTTCAAAGCTGT 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2128 GCACACAAAACACTACAAATAAAAGATAGTCCTCCTGAAGTGGCTGGGGCCAGACTTCATCTTTTCAAAGCTGT 2201
Query 1677 CCGTTCTGTCCTAGCCAATGGAATGAAACTTCTTGGAATAACACCTGTATGTAGGATG---------------- 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2202 CCGTTCTGTCCTAGCCAATGGAATGAAACTTCTTGGAATAACACCTGTATGTAGGATGTAATTTCCATTAAAAT 2275
Query 1735 -------------------------------------------------------------------------- 1734
Sbjct 2276 GGCTTTTAAAATGTCAAGTGAATTCTAGTTATCTATTCTGAGATGCCTTGCTGTTCAGAATAAATTTAAATTTT 2349
Query 1735 -------------------------------------------------------------------------- 1734
Sbjct 2350 TTTTTTTTTTTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGTGATGTTGGCTCACT 2423
Query 1735 -------------------------------------------------------------------------- 1734
Sbjct 2424 GCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGTGC 2497
Query 1735 -------------------------------------------------------------------------- 1734
Sbjct 2498 CATCACGCCAGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCTCTATGTTGGTCAGGCTGGTCTTGCACTC 2571
Query 1735 -------------------------------------------------------------------------- 1734
Sbjct 2572 CCGACCTCAGGTTATCTGTCTGCCTTGGCCTCCCAAAGTGTTGGGATTAGAGGCATGAACCACCACGCCCAGCC 2645
Query 1735 -------------------------------------------------------------------------- 1734
Sbjct 2646 AAAGTTAAACTATTATTCTGTGTCAGAATCTGTATTAAATGTGACTTGTCAAGTTATTCAGTCTTTATCCTTAA 2719
Query 1735 --------------------- 1734
Sbjct 2720 ATAAATGAGTTATCTGAATTC 2740
