Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08690
Subject:
NR_146757.1
Aligned Length:
2569
Identities:
1711
Gaps:
843

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA  74

Query    1  -ATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAG-------------------------------------  36
             ||||||||||||||||||||||||||||||||||||                                     
Sbjct   75  CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGGTATGGATCCCGGAGCGCGCAGAGGAGTCCCTGAGGA  148

Query   37  ------------------CTTT------------CCA---------------GAGTGT---------TGAATC-  55
                              ||||            |||               |||.||         .||||| 
Sbjct  149  GCTAGGGACCCCAAAGGCCTTTCACCGCTGCGGGCCAGTCCTCAGTCAGCTGGAGGGTGGGTCCCACGGAATCC  222

Query   56  -------TTCCACCAGAAAACTTGATCACATCAATATCTGCAG----------TTC------------------  94
                   |||.|||     ||.|..||.|  |..|.||||.||          |||                  
Sbjct  223  TGTTAGTTTCTACC-----ACCTCCTCCC--CCTTCTCTGGAGCTGGTGGAGCTTCAGAAGTCCTGTGGAGCGT  289

Query   95  ----------CAATTTCCC------AA------------AAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGA  140
                      ||.|||..|      ||            |||| ||||||||||||||||||||||||||||||
Sbjct  290  CGGCTGGGATCAGTTTGTCTCGGTGAAAAGTAAACTTTGAAAG-AGAAGTAGCTGATTTTCAGCTTTCTGTGGA  362

Query  141  TTCTTTATTGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGC  214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  363  TTCTTTATTGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGC  436

Query  215  TAAGATGTGATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTC  288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  437  TAAGATGTGATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTC  510

Query  289  TTAACAAAGACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGG  362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  511  TTAACAAAGACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGG  584

Query  363  ACTTCCCCAGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGC  436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  585  ACTTCCCCAGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGC  658

Query  437  GTTCTACCATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTAC  510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  659  GTTCTACCATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTAC  732

Query  511  CTTGGCGATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCA  584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  733  CTTGGCGATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCA  806

Query  585  GTCCAATCCTCTACAGCATCTCTTTGAA----------------------------------------------  612
            ||||||||||||||||||||||||||||                                              
Sbjct  807  GTCCAATCCTCTACAGCATCTCTTTGAAGTCTAGAGACAAGATCGCTATGTAGACACACCGTGAACCATTTCCC  880

Query  613  --------------------------------------------------------------------------  612
                                                                                      
Sbjct  881  ACTGTGGGCCTGCACCACCCCAGGGGCTTCCTAGCTTCTGCTCTTCTGGAAGTCTTCCCCATCTCCTCCCCATT  954

Query  613  ----GTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCACAGGAGTTCTTCC  682
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  955  CCAGGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCACAGGAGTTCTTCC  1028

Query  683  AACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGCATTGAAGAGTAC  756
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029  AACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGCATTGAAGAGTAC  1102

Query  757  ATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCA  830
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1103  ATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCA  1176

Query  831  AGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAGAACAATAAAAGGAACGGCTGTAGTAGATCTCT  904
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1177  AGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTGTAGTAGATCTCT  1250

Query  905  CTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGAT  978
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251  CTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGAT  1324

Query  979  CTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGACAGATAAAGGACAAAA  1052
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1325  CTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGACAGATAAAGGACAAAA  1398

Query 1053  AAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAAAGGTGCCAGCACGTGC  1126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1399  AAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAAAGGTGCCAGCACGTGC  1472

Query 1127  CCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGATGTTTTAAATGAGATT  1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1473  CCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGATGTTTTAAATGAGATT  1546

Query 1201  CAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACCCACAAGAGACTGCAGA  1274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1547  CAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACCCACAAGAGACTGCAGA  1620

Query 1275  GAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGACTACAAGTTCAGCTGGG  1348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621  GAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGACTACAAGTTCAGCTGGG  1694

Query 1349  ATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCGCCTCCACAGTTTGGAA  1422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1695  ATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCGCCTCCACAGTTTGGAA  1768

Query 1423  GAGACTTTTGGATGTGGGTACCTGAATGACTTCAACACTGCTTGTTTACAAGAGCCACAGTCTGTTTCAATTCT  1496
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1769  GAGACTTTTGGATGTGGGTACCTGAATGACTTCAACACTGCTTGTTTACAAGAGCCACAGTCTGTTTCAATTCT  1842

Query 1497  TCAGCATCTTCTCAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGACTTTCAACCCAGGCATATCGTCAGTT  1570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1843  TCAGCATCTTCTCAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGACTTTCAACCCAGGCATATCGTCAGTT  1916

Query 1571  ACCTTCTAACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACTACAAATAAAAGATAGTCCTCCTGAAGTG  1644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1917  ACCTTCTAACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACTACAAATAAAAGATAGTCCTCCTGAAGTG  1990

Query 1645  GCTGGGGCCAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCCAATGGAATGAAACTTCTTGGAATAAC  1718
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1991  GCTGGGGCCAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCCAATGGAATGAAACTTCTTGGAATAAC  2064

Query 1719  ACCTGTATGTAGGATG----------------------------------------------------------  1734
            ||||||||||||||||                                                          
Sbjct 2065  ACCTGTATGTAGGATGTAATTTCCATTAAAATGGCTTTTAAAATGTCAAGTGAATTCTAGTTATCTATTCTGAG  2138

Query 1735  --------------------------------------------------------------------------  1734
                                                                                      
Sbjct 2139  ATGCCTTGCTGTTCAGAATAAATTTAAATTTTTTTTTTTTTTTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAG  2212

Query 1735  --------------------------------------------------------------------------  1734
                                                                                      
Sbjct 2213  GCTGGAGTGCAATGGTGTGATGTTGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAG  2286

Query 1735  --------------------------------------------------------------------------  1734
                                                                                      
Sbjct 2287  CCTCCTGAGTAGCTGGGATTACAGGCACGTGCCATCACGCCAGGCTAATTTTGTATTTTTAGTAGAGACAGGGT  2360

Query 1735  --------------------------------------------------------------------------  1734
                                                                                      
Sbjct 2361  TTCTCTATGTTGGTCAGGCTGGTCTTGCACTCCCGACCTCAGGTTATCTGTCTGCCTTGGCCTCCCAAAGTGTT  2434

Query 1735  --------------------------------------------------------------------------  1734
                                                                                      
Sbjct 2435  GGGATTAGAGGCATGAACCACCACGCCCAGCCAAAGTTAAACTATTATTCTGTGTCAGAATCTGTATTAAATGT  2508

Query 1735  -----------------------------------------------------  1734
                                                                 
Sbjct 2509  GACTTGTCAAGTTATTCAGTCTTTATCCTTAAATAAATGAGTTATCTGAATTC  2561

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