Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08696
- Subject:
- XR_001745565.1
- Aligned Length:
- 2119
- Identities:
- 1011
- Gaps:
- 1107
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGGCTCCCTAAATGATTCCAAATGTACAGCCAAGGTGGCAAAGCACTCGAAGGCCTCCTATTCCCCACGAGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTCTGAAACAGCAGCAGGTCTGGGTGCTGCTGATGCAGAATGAGTACCAAGATCTCCCTGAAGCCCAATAAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCACTGACCACTCCTGTAAGTCAGGAGCAGTGAACTGAAGCCAGCTGTTCGGATCTGGGTGCTATAGGTACCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGTGCACGTTCTCATCATGATTGTTCATTGTGCATTTCATTAGGTGGAATCCGTTTAGGAATCTGTCATGGGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCAAAAAAACATTAAGCTTGGAATAATCCATGTCTGCTTGTTTAGCCCATCAGACAAATCATTTGCAATTAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAGGATCCTCATGCTGAAGAAGATAGAGAAAGAAAGCTTGCACAGAAAAGTTAGAGGCCTCAAGTTGGGAAAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACAAACCAAAAGCAGAGAGGAGTCACCCAAAGGAAGCAGCACCCAGTGAACCCCTGCCGTGAGTCAGCACGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGAGGCCCAGCCCTTTCTAGGGGAGCCTGATTAAAGATCAGGCTCAGCTGCTGCTGCTGCTGCTGCTGCTTGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCAAGACCAAGTCGTAATAGCAACTTCCCTTCCTCAGCTGCCTGAACTTTTTTTTTCCCTTGTAGCTGGAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTGTCACATTTTGCTCACTCTCAACCTTCCTCGCCCACCCCCTTCCCGGAGAACCTGTGCGGTGTGTAGAGG 740
Query 1 --------------------------------------------------------------------ATGAAG 6
||||||
Sbjct 741 GTGCTGTGAGCCACCTCCAGCCTCGGGTGGCTGCTTAAGTAACTTTCAACTCCTCTCTTCTTAACACTATGAAG 814
Query 7 TGTCTCGGGAAGCGCAGGGGCCAGGCAGCTGCTTTCCTGCCTCTTTGCTGGCTCTTTTTGAAGATTCTGCAACC 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGTCTCGGGAAGCGCAGGGGCCAGGCAGCTGCTTTCCTGCCTCTTTGCTGGCTCTTTTTGAAGATTCTGCAACC 888
Query 81 GGGGCACAGCCACCTTTATAACAACCGCTATGCTGGTGATAAAGTGATAAGATTTATTCCCAAAACAGAAGAGG 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGGGCACAGCCACCTTTATAACAACCGCTATGCTGGTGATAAAGTGATAAGATTTATTCCCAAAACAGAAGAGG 962
Query 155 AAGCATATGCACTGAAGAAAATATCCTATCAACTTAAGGTGGACCTGTGGCAGCCCAGCAGTATCTCCTATGTA 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAGCATATGCACTGAAGAAAATATCCTATCAACTTAAGGTGGACCTGTGGCAGCCCAGCAGTATCTCCTATGTA 1036
Query 229 TCAGAGGGAACAGTTACTGATGTCCATATCCCCCAAAATGGTTCCCGAGCCCTGTTAGCCTTCTTACAGGAAGC 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCAGAGGGAACAGTTACTGATGTCCATATCCCCCAAAATGGTTCCCGAGCCCTGTTAGCCTTCTTACAGGAAGC 1110
Query 303 CAACATCCAGTACAAGGTCCTCATAGAAGATCTTCAGAAAACACTGGAGAAGGGAAGCAGCTTGCACACCCAGA 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAACATCCAGTACAAGGTCCTCATAGAAGATCTTCAGAAAACACTGGAGAAGGGAAGCAGCTTGCACACCCAGA 1184
Query 377 GAAACCGAAGATCCCTCTCTGGATATAATTATGAAGTTTATCACTCCTTAGAAGAAATTCAAAATTGGATGCAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAAACCGAAGATCCCTCTCTGGATATAATTATGAAGTTTATCACTCCTTAGAAGAAATTCAAAATTGGATGCAT 1258
Query 451 CATCTGAATAAAACTCACTCAGGCCTCATTCACATGTTCTCTATTGGAAGATCATATGAGGGAAGATGTCTTTT 524
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1259 CATCTGAATAAAACTCACTCAGGCCTCATTCACATGTTCTCTATTGGAAGATCATATGAGGGAAGATCTCTTTT 1332
Query 525 TATTTTAAAGCTGGGCAGACGATCACGACTCAAAAGAGCTGTTTGGATAGACTGTGGTATTCATGCAAGAGAAT 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TATTTTAAAGCTGGGCAGACGATCACGACTCAAAAGAGCTGTTTGGATAGACTGTGGTATTCATGCAAGAGAAT 1406
Query 599 GGATTGGTCCTGCCTTTTGTCAGTGGTTTGTAAAAGAAGCTCTTCTAACATATAAGAGTGACCCAGCCATGAGA 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGATTGGTCCTGCCTTTTGTCAGTGGTTTGTAAAAGAAGCTCTTCTAACATATAAGAGTGACCCAGCCATGAGA 1480
Query 673 AAAATGTTGAATCATCTATATTTCTATATCATGCCTGTGTTTAACGTCGATGGATACCATTTTAGTTGGACCAA 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAAATGTTGAATCATCTATATTTCTATATCATGCCTGTGTTTAACGTCGATGGATACCATTTTAGTTGGACCAA 1554
Query 747 TGATCGATTTTGGAGAAAAACAAGGTCAAGGAACTCAAGGTTTCGCTGCCGTGGAGTGGATGCCAATAGAAACT 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGATCGATTTTGGAGAAAAACAAGGTCAAGGAACTCAAGGTTTCGCTGCCGTGGAGTGGATGCCAATAGAAACT 1628
Query 821 GGAAAGTGAAGTGGTGTGATGAAGGAGCTTCTATGCACCCTTGTGATGACACATACTGTGGCCCTTTTCCAGAA 894
|||||||||||||
Sbjct 1629 GGAAAGTGAAGTG------------------------------------------------------------- 1641
Query 895 TCTGAGCCGGAAGTGAAGGCTGTAGCTAACTTCCTTCGAAAACACAGAAAGCACATTAGGGCTTATCTCTCCTT 968
Sbjct 1642 -------------------------------------------------------------------------- 1641
Query 969 TCATGCATATGCTCAGATGTTACTGTATCCCTATTCTTACAAATATGCAACAATTCCCAATTTTAGATGTGTGG 1042
||||||
Sbjct 1642 --------------------------------------------------------------------GTGTGG 1647
Query 1043 AATCTGCAGCTTATAAAGCTGTGAATGCACTTCAGTCAGTATACGGGGTACGATACAGATATGGACCAGCCTCC 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1648 AATCTGCAGCTTATAAAGCTGTGAATGCACTTCAGTCAGTATACGGGGTACGATACAGATATGGACCAGCCTCC 1721
Query 1117 ACAACGTTGTATGTGAGCTCTGGTAGCTCAATGGATTGGGCCTACAAAAATGGAATACCTTATGCATTTGCTTT 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1722 ACAACGTTGTATGTGAGCTCTGGTAGCTCAATGGATTGGGCCTACAAAAATGGAATACCTTATGCATTTGCTTT 1795
Query 1191 CGAACTACGTGACACTGGATATTTTGGATTTTTACTCCCAGAGATGCTCATCAAACCCACCTGTACAGAAACTA 1264
|||||||||||||||||||||||||
Sbjct 1796 CGAACTACGTGACACTGGATATTTT------------------------------------------------- 1820
Query 1265 TGCTGGCTGTGAAAAATATCACAATGCACCTGCTAAAGAAATGTCCC 1311
Sbjct 1821 ----------------------------------------------- 1820
