Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_08729
• Subject: XM_006538010.2
• Aligned Length: 2164
• Identities: 1815
• Gaps: 38

Alignment

Query    1  ATGCTCCAGATCCCTCAGGAGAAGAGCCAGGCCTACCCCCGCCGCCGCCGGCCTGGCTGCTACGCATACC----  70
            |||..|||||.||.||||||||..||||||||||||||   |||.|..||.|||||..||.|||||..||    
Sbjct    1  ATGTCCCAGAACCTTCAGGAGACAAGCCAGGCCTACCC---CCGACATCGACCTGGTAGCCACGCAGGCCCTAA  71

Query   71  --GTCAGAA-------CCCCGAGGCCATCGCAGCCGCAGCTATGTACACCTTCCTGCCCGACAACTTCTCACCT  135
              |||..||       ||.|||             |||.|.||||||||.||||||||.|||||.||.||||||
Sbjct   72  AAGTCTCAAAGTTACCCCACGA-------------GCAACCATGTACACTTTCCTGCCTGACAATTTTTCACCT  132

Query  136  GCCAAGCCCAAGCCTTCCAAAGAGCTGAAGCCGCTGCTGGGCTCCGCGGTTCTGGGGCTGCTGCTTGTGCTGGC  209
            |||||.||||||||..|.||||||||||..||.||||||.||||||||||.|||||.|||||.||.|||.||||
Sbjct  133  GCCAAACCCAAGCCCACTAAAGAGCTGAGACCTCTGCTGTGCTCCGCGGTACTGGGACTGCTACTGGTGTTGGC  206

Query  210  CGCGGTGGTGGCCTGGTGCTACTACAGCGTCTCCCTACGCAAGGCGGAGCGACTTCGCGCGGAGCTGCTGGACC  283
            |||.||.||||||||||||||||||||.|.||||||||||||.||.||.||.||.|||||||||||||||||||
Sbjct  207  CGCAGTTGTGGCCTGGTGCTACTACAGTGCCTCCCTACGCAAAGCTGAACGCCTGCGCGCGGAGCTGCTGGACC  280

Query  284  TGAAAGCTGGCGGCTTCTCCATCCGCAATCAGAAGGGAGAGCAGGTCTTCCGCCTGGCCTTCCGCTCCGGCGCG  357
            ||||...||||||||||||||||||.||.||||||||.|||||.|||||||||.||||||||||.|||||.||.
Sbjct  281  TGAACCGTGGCGGCTTCTCCATCCGTAACCAGAAGGGTGAGCAAGTCTTCCGCTTGGCCTTCCGTTCCGGTGCT  354

Query  358  CTGGACCTTGACTCCTGCAGCCGCGATGGCGCCCTGCTGGGCTGCTCGCTCACGGCCGACGGGCTGCCGCTGCA  431
            ||.||||||||||||||||||||.|||||.||.|||||.||||||||.|...||||||||||.|..|||.||||
Sbjct  355  CTAGACCTTGACTCCTGCAGCCGGGATGGTGCGCTGCTTGGCTGCTCCCGAGCGGCCGACGGACGCCCGTTGCA  428

Query  432  CTTCTTCATCCAGACTGTGCGGCCCAAGGACACGGTCATGTGCTACCGCGTGCGCTGGGAGGAGGCAGCGCCGG  505
            ||||||.||.|||||.||.||.||.||||||||.||.||||||||||||||||||||||||||.||.|.|||.|
Sbjct  429  CTTCTTTATTCAGACAGTACGACCTAAGGACACTGTAATGTGCTACCGCGTGCGCTGGGAGGAAGCTGTGCCAG  502

Query  506  GCCGGGCCGTGGAGCACGCCATGTTCTTGGGCGACGCGGCGGCCCACTGGTATGGTGGCGCCGAGATGAGGACG  579
            |.||.||.|||||||||||.|||||..||||.||.||.|||||.|||||||||||.|||||.||||||||||||
Sbjct  503  GGCGTGCTGTGGAGCACGCGATGTTTCTGGGAGATGCTGCGGCGCACTGGTATGGCGGCGCAGAGATGAGGACG  576

Query  580  CAACACTGGCCCATCCGCCTGGATGGCCAGCAGGAGCCCCAGCCGTTCGTCACCAGCGATGTCTACTCCTCCGA  653
            ||||||||||||||||||||.|||||||||||.||.||.|||||.||.|||||.|||||.|||||.||.||.||
Sbjct  577  CAACACTGGCCCATCCGCCTAGATGGCCAGCAAGAACCGCAGCCATTTGTCACGAGCGACGTCTATTCATCTGA  650

Query  654  CGCCGCGTTTGGGGGCATCCTCGAGCGCTACTGGCTATCTTCGCGCGCGGCCGCCATCAAAGTCAATGACTCAG  727
            ||||||.||.|||||||||||.||||||||||||.|||||||.|||||.||.|||||||||||||||||.||||
Sbjct  651  CGCCGCATTCGGGGGCATCCTTGAGCGCTACTGGTTATCTTCACGCGCCGCTGCCATCAAAGTCAATGATTCAG  724

Query  728  TGCCCTTCCACCTGGGCTGGAACAGCACGGAGCGCTCGCTGCGGCTTCAGGCGCGCTACCACGACACGCCCTAC  801
            ||||||||||||||||||||||.|||||||||||.|||.||.|.||.|||||.||||||||||||||..|.|||
Sbjct  725  TGCCCTTCCACCTGGGCTGGAATAGCACGGAGCGTTCGATGAGACTGCAGGCACGCTACCACGACACATCTTAC  798

Query  802  AAGCCACCCGCCGGCCGCGCCGCAGCGCCAGAGCTGAGCTACCGAGTGTGCGTGGGCTCAGACGTCACCTCCAT  875
            ||||||||.||.|||||..|.||.|||||||||||.||||||||.|||||||||||||||||.|||||.|||||
Sbjct  799  AAGCCACCAGCTGGCCGTACTGCCGCGCCAGAGCTCAGCTACCGCGTGTGCGTGGGCTCAGATGTCACTTCCAT  872

Query  876  CCACAAGTACATGGTGCGTCGCTACTTCAACAAGCCGTCAAGGGTGCCAGCACCCGAGGCCTTCCGAGACCCCA  949
            |||||||||||||||.||.||.||||||||||||||.||.|||||.|||||..|.|||||||||||||||||||
Sbjct  873  CCACAAGTACATGGTTCGACGTTACTTCAACAAGCCATCCAGGGTACCAGCGTCAGAGGCCTTCCGAGACCCCA  946

Query  950  TTTGGTCCACATGGGCGCTGTACGGGCGCGCCGTGGACCAGGACAAGGTGCTGCGTTTTGCCCAACAGATCCGC  1023
            ||||||||||.|||||.|||.|.||||||||.|||||||||.||||||||||||..||.|||||.|||||||||
Sbjct  947  TTTGGTCCACGTGGGCACTGCATGGGCGCGCTGTGGACCAGAACAAGGTGCTGCAATTCGCCCAGCAGATCCGC  1020

Query 1024  CTGCACCACTTCAACAGCAGCCACCTGGAAATCGACGACATGTACACACCTGCTTATGGCGACTTCGACTTCGA  1097
            |.|||||.|||.||.||||||||||||||||||||.|||||||||||.||.||.|||||||||||..|.|||||
Sbjct 1021  CAGCACCGCTTTAATAGCAGCCACCTGGAAATCGATGACATGTACACGCCCGCCTATGGCGACTTTAATTTCGA  1094

Query 1098  TGAGGTCAAATTCCCCAACGCCAGCGACATGTTCCGCCGCCTGCGCGACGCCGGCTTCCGCGTCACGCTCTGGG  1171
            .||||.|||.||.|||||||||||.||||||||||||||||||||.||.|||||||||||||||||.||.||||
Sbjct 1095  CGAGGGCAAGTTTCCCAACGCCAGTGACATGTTCCGCCGCCTGCGAGATGCCGGCTTCCGCGTCACACTTTGGG  1168

Query 1172  TGCACCCTTTTGTCAACTACAACTCGTCGCGCTTCGGCGAGGGCGTGGAGCGCGAGCTGTTCGTGCGCGAACCC  1245
            ||||.||.|||||||||||.|||||||||.||||||||||.||.||||||||||||||||||||||||||.|||
Sbjct 1169  TGCATCCGTTTGTCAACTATAACTCGTCGAGCTTCGGCGAAGGTGTGGAGCGCGAGCTGTTCGTGCGCGAGCCC  1242

Query 1246  ACGGGCCGGTTACCTGCGCTGGTGCGCTGGTGGAACGGCATCGGCGCGGTGCTAGACTTCACGCACCCAAAGGC  1319
            |||||||||.|.||.|||||||||||||||||||||||.||.|||||.|||||.|||||||||||||||.||||
Sbjct 1243  ACGGGCCGGCTGCCCGCGCTGGTGCGCTGGTGGAACGGTATTGGCGCAGTGCTGGACTTCACGCACCCAGAGGC  1316

Query 1320  CCGCGACTGGTTCCAGGGACACCTGCGGCGGCTGCGCTCTCGCTACTCCGTGGCTTCCTTCAAGTTCGACGCGG  1393
            |||.||.|||||||||||||||||.|||||.|||||||..||||||..||||.|.|||||.|||||||||||||
Sbjct 1317  CCGAGAGTGGTTCCAGGGACACCTACGGCGCCTGCGCTTGCGCTACAACGTGACCTCCTTTAAGTTCGACGCGG  1390

Query 1394  GCGAGGTCAGCTACCTGCCGCGGGACTTCAGCACCTACCGGCCGCTGCCGGACCCCAGCGTCTGGAGCCGGCGC  1467
            |.|||||||||||||||||..|||||||||||||||||.||||.|||.|.||||||||.||.||||||.||||.
Sbjct 1391  GTGAGGTCAGCTACCTGCCCAGGGACTTCAGCACCTACAGGCCTCTGTCTGACCCCAGTGTGTGGAGCAGGCGG  1464

Query 1468  TACACTGAGATGGCGCTGCCCTTCTTCTCGCTGGCGGAGGTGCGCGTAGGCTACCAGTCACAGAACATCTCCTG  1541
            |||||.|||||||||..|||||||||||||||.||.|||||.|||||.||.|||||||||||||||||||||||
Sbjct 1465  TACACCGAGATGGCGGAGCCCTTCTTCTCGCTAGCCGAGGTCCGCGTGGGGTACCAGTCACAGAACATCTCCTG  1538

Query 1542  CTTCTTCCGCCTGGTGGATCGCGACTCTGTGTGGGGCTACGACCTGGGGTTGCGCTCACTCATCCCCGCGGTGC  1615
            |||||||||.||.|||||.||||||||.||.||||||||||||||||||.|||||||.||.|||||.|||||||
Sbjct 1539  CTTCTTCCGTCTAGTGGACCGCGACTCGGTATGGGGCTACGACCTGGGGCTGCGCTCTCTTATCCCTGCGGTGC  1612

Query 1616  TCACCGTCAGCATGCTGGGCTACCCATTCATCCTACCCGATATGGTGGGCGGCAACGCCGTGCCCCAGCGGACA  1689
            ||||||||||.|||||||||||.||.||||||.|.|||||||||.|.||.||||||||.|||||..||||.|||
Sbjct 1613  TCACCGTCAGTATGCTGGGCTATCCGTTCATCTTGCCCGATATGATAGGTGGCAACGCGGTGCCGGAGCGCACA  1686

Query 1690  GCCGGCGGC---GAT------GTGCCCGAGCGCGAGCTCTACATTCGCTGGCTGGAAGTGGCCGCCTTTATGCC  1754
            ||||||.||   |||      |.|||.|||||||||||||||.|.|||||||||||.|||||||||||.|||||
Sbjct 1687  GCCGGCCGCCAAGATGGGCCGGGGCCAGAGCGCGAGCTCTACGTGCGCTGGCTGGAGGTGGCCGCCTTCATGCC  1760

Query 1755  GGCCATGCAGTTCTCTATCCCGCCCTGGCGCTACGACGCGGAAGTGGTGGCCATCGCGCAGAAGTTCGCCGCCC  1828
            .|||||||||||.||.|||||.||.||||..||||||||.||||||||.||||||||.||.||.|||||.||.|
Sbjct 1761  TGCCATGCAGTTTTCAATCCCTCCTTGGCAGTACGACGCAGAAGTGGTAGCCATCGCACACAAATTCGCTGCTC  1834

Query 1829  TGCGGGCCTCGCTTGTGGCACCGCTGTTGCTTGAGCTGGCGGGCGAGGTCACCGACACGGGTGACCCTATCGTG  1902
            ||||.|||||.||.|||||.||.|||.||||.|||||.||.||.|||.||||||||||.||.|||||.||||||
Sbjct 1835  TGCGCGCCTCCCTCGTGGCGCCACTGCTGCTAGAGCTTGCTGGTGAGATCACCGACACTGGCGACCCCATCGTG  1908

Query 1903  CGCCCCCTTTGGTGGATTGCGCCCGGCGACGAGACAGCTCACCGTATCGACTCGCAGTTCCTTATTGGGGACAC  1976
            ||||||||.||||||||.||.||.||.||.||.||.||.||.||.||.|||||.|||||.||.||.||||||||
Sbjct 1909  CGCCCCCTGTGGTGGATCGCACCGGGGGATGAAACGGCCCATCGCATTGACTCACAGTTTCTCATCGGGGACAC  1982

Query 1977  GCTGCTTGTGGCCCCGGTGCTGGAGCCAGGCAAGCAGGAGCGCGACGTCTATTTGCCCGCCGGCAAGTGGCGCA  2050
            ||||.|.|||||.||||||||.|||||.||.|||||.|||||.||.|||||..||||.||||||||.|||||.|
Sbjct 1983  GCTGTTGGTGGCGCCGGTGCTAGAGCCTGGTAAGCAAGAGCGTGATGTCTACCTGCCTGCCGGCAAATGGCGAA  2056

Query 2051  GCTACAAGGGTGAGCTTTTCGACAAGACGCCGGTGCTGCTCACCGATTACCCGGTCGACCTGGATGAGATCGCC  2124
            |||||||||||||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||.|||||
Sbjct 2057  GCTACAAGGGTGAACTTTTTGACAAGACGCCGGTGCTGCTCACGGATTACCCTGTCGACCTGGATGAGGTCGCC  2130

Query 2125  TACTTTACCTGGGCGTCC  2142
            ||.||.||||||||.|||
Sbjct 2131  TATTTCACCTGGGCTTCC  2148