Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08827
- Subject:
- XM_011518910.2
- Aligned Length:
- 2258
- Identities:
- 940
- Gaps:
- 1315
Alignment
Query 1 ATGGAGCTGAGGAGTACAGCAGCCCCCAGAGCTGAGGGCTACAGCAACGTGGGCTTCCAGAATGAAGAAAACTT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGCTGAGGAGTACAGCAGCCCCCAGAGCTGAGGGCTACAGCAACGTGGGCTTCCAGAATGAAGAAAACTT 74
Query 75 TCTTGAGAACGAGAACACATCAGGAAACAACTCAATAAGAAGCAGAGCTGTGCAAAGCAGGGAGCACACAAACA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCTTGAGAACGAGAACACATCAGGAAACAACTCAATAAGAAGCAGAGCTGTGCAAAGCAGGGAGCACACAAACA 148
Query 149 CCAA---------------------------------------------------------------------- 152
||||
Sbjct 149 CCAAACAGAGAATCAAAGGCCACATTGGATATGACAGAAGACAAGTGCTGAGATTTGACATTATACTTCTTAGA 222
Query 153 -------------------------------------------------------------------------- 152
Sbjct 223 GCACACTCAAACTGCTCCACCTCCATCTATTTCCTCCCCCACCAGCTTCTGTACCATTGGTTACAAGAGCCAGG 296
Query 153 --------------------------------ACAGGATGAAGAACAGGTCACAGTTGAGCAGGATTCTCCAAG 194
||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTTATTATTTGAGACATTATTGGAGACTGGAGACAGGATGAAGAACAGGTCACAGTTGAGCAGGATTCTCCAAG 370
Query 195 AAACAGAGAACACATGGAGGATGATGATGAGGAGATGCAACAAAAAGGGTGTTTGGAAAGGAGGTATGACACGG 268
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAACAGAGAACACATGGAGGATGATGATGAGGAGATGCAACAAAAAG--------------------------- 417
Query 269 TATGTGGTTTCTGTAGGAAACACAAAACAACTCTTCGGCACATCATCTGGGGCATTTTATTAGCAGGTTATCTG 342
|||||||||
Sbjct 418 -----------------------------------------------------------------GGTTATCTG 426
Query 343 GTTATGGTGATTTCGGCCTGTGTGCTGAACTTTCACAGAGCCCTTCCTCTTTTTGTGATCACCGTGGCTGCCAT 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 427 GTTATGGTGATTTCGGCCTGTGTGCTGAACTTTCACAGAGCCCTTCCTCTTTTTGTGATCACCGTGGCTGCCAT 500
Query 417 CTTCTTTGTTGTCTGGGATCACCTGATGGCCAAATACGAACATCGAATTGATGAGATGCTGTCTCCTGGCAGAA 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 501 CTTCTTTGTTGTCTGGGATCACCTGATGGCCAAATACGAACATCGAATTGATGAGATGCTGTCTCCTGGCAGAA 574
Query 491 GGCTTCTAAACAGCCATTGGTTCTGGCTGAAGTGGGTGATCTGGAGCTCCCTGGTCCTAGCAGTTATTTTCTGG 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 575 GGCTTCTAAACAGCCATTGGTTCTGGCTGAAGTGGGTGATCTGGAGCTCCCTGGTCCTAGCAGTTATTTTCTGG 648
Query 565 TTGGCCTTTGACACTGCCAAATTGGGTCAACAGCAGCTGGTGTCCTTCGGTGGGCTCATAATGTACATTGTCCT 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 649 TTGGCCTTTGACACTGCCAAATTGGGTCAACAGCAGCTGGTGTCCTTCGGTGGGCTCATAATGTACATTGTCCT 722
Query 639 GTTATTTCTATTCTCCAAGTACCCAACCAGAGTTTACTGGAGACCTGTCTTATGGGGAATCGGGCTACAGTTTC 712
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 GTTATTTCTATTTTCCAAGTACCCAACCAGAGTTTACTGGAGACCTGTCTTATGGGGAATCGGGCTACAGTTTC 796
Query 713 TTCTTGGGCTCTTGATTCTAAGGACTGACCCTGGATTTATAGCTTTTGATTGGTTGGGCAGACAAGTTCAGACT 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 797 TTCTTGGGCTCTTGATTCTAAGGACTGACCCTGGATTTATAGCTTTTGATTGGTTGGGCAGACAAGTTCAGACT 870
Query 787 TTTCTGGAGTACACAGATGCTGGTGCTTCATTTGTCTTTGGTGAGAAATACAAAGACCACTTCTTTGCATTTAA 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 871 TTTCTGGAGTACACAGATGCTGGTGCTTCATTTGTCTTTGGTGAGAAATACAAAGACCACTTCTTTGCATTTAA 944
Query 861 GGTCCTACCGATCGTGGTTTTCTTCAGCACTGTGATGTCCATGCTGTACTACCTGGGACTGATGCAGTGGATTA 934
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 GGTCCTGCCGATCGTGGTTTTCTTCAGCACTGTGATGTCCATGCTGTACTACCTGGGACTGATGCAGTGGATTA 1018
Query 935 TTAGAAAGGTTGGATGGATCATGCTAGTTACTACGGGATCATCTCCTATTGAATCTGTAGTTGCTTCTGGCAAT 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 TTAGAAAGGTTGGATGGATCATGCTAGTTACTACGGGATCATCTCCTATTGAATCTGTAGTTGCTTCTGGCAAT 1092
Query 1009 ATATTTGTTGGACAA---------ACGGAGTCTCCACTGCTGGTCCGACCATATTTACCTTACATCACCAAGTC 1073
||||||||||||||| |.||| |||||||
Sbjct 1093 ATATTTGTTGGACAAGTGACGCTGATGGA---------GCTGGTC----------------------------- 1128
Query 1074 TGAACTCCACGCCATCATGACCGCCGGGTTCTCTACCATTGCTGGAAGCGTGCTAGGTGCATACATTTCTTTTG 1147
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1148 GGGTTCCATCCTCCCACTTGTTAACAGCGTCAGTTATGTCAGCACCTGCGTCATTGGCTGCTGCTAAACTCTTT 1221
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1222 TGGCCTGAGACAGAAAAACCTAAAATAACCCTCAAGAATGCCATGAAAATGGAAAGTGGTGATTCAGGGAATCT 1295
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1296 TCTAGAAGCTGCAACACAGGGAGCATCCTCCTCCATCTCCCTGGTGGCCAACATCGCTGTGAATCTGATTGCCT 1369
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1370 TCCTGGCCCTGCTGTCTTTTATGAATTCAGCCCTGTCCTGGTTTGGAAACATGTTTGACTACCCACAGCTGAGT 1443
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1444 TTTGAGCTAATCTGCTCCTACATCTTCATGCCCTTTTCCTTCATGATGGGAGTGGAATGGCAGGACAGCTTTAT 1517
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1518 GGTTGCCAGACTCATAGGTTATAAGACCTTCTTCAATGAATTTGTGGCTTATGAGCACCTCTCAAAATGGATCC 1591
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1592 ACTTGAGGAAAGAAGGTGGACCCAAATTTGTAAACGGTGTGCAGCAATATATATCAATTCGTTCTGAGATAATC 1665
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1666 GCCACTTACGCTCTCTGTGGTTTTGCCAATATCGGGTCCCTAGGAATCGTGATCGGCGGACTCACATCCATGAC 1739
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1740 TCCTTCCAGAAAGCGTGATATCGCCTCGGGGGCAGTGAGAGCTCTGATTGCGGGGACCGTGGCCTGCTTCATGA 1813
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1814 CAGCCTGCATCGCAGGCATACTCTCCAGCACTCCTGTGGACATCAACTGCCATCACGTTTTAGAGAATGCCTTC 1887
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1888 AACTCCACTTTCCCTGGAAACACAACCAAGGTGATAGCTTGTTGCCAAAGTCTGTTGAGCAGCACTGTTGCCAA 1961
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 1962 GGGTCCTGGTGAAGTCATCCCAGGAGGAAACCACAGTCTGTATTCTTTGAAGGGCTGCTGCACATTGTTGAATC 2035
Sbjct 1129 -------------------------------------------------------------------------- 1128
Query 2036 CATCGACCTTTAACTGCAATGGGATCTCTAATACATTT 2073
Sbjct 1129 -------------------------------------- 1128
