Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08834
Subject:
XM_011243444.2
Aligned Length:
1300
Identities:
813
Gaps:
365

Alignment

Query    1  ATGGAGGGGGAGCCCTCCCAGCCTCCCAACAGCAGTTGGCCCCTAAGTCAGAATGGGACTAACACTGAGGCCAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCGGCTACAAACCTCACCTTCTCCTCCTACTATCAGCACACCTCCCCTGTGGCGGCCATGTTCATTGTGGCCT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATGCGCTCATCTTCCTGCTCTGCATGGTGGGCAACACCCTGGTCTGTTTCATCGTGCTCAAGAACCGGCACATG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CATACTGTCACCAACATGTTCATCCTCAACCTGGCTGTCAGTGACCTGCTGGTGGGCATCTTCTGCATGCCCAC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CACCCTTGTGGACAACCTCATCACTGGGTGGCCCTTCGACAATGCCACATGCAAGATGAGCGGCTTGGTGCAGG  370
                                                                   ||||||||||||||.||||
Sbjct    1  -------------------------------------------------------ATGAGCGGCTTGGTACAGG  19

Query  371  GCATGTCTGTGTCGGCTTCCGTTTTCACACTGGTGGCCATTGCTGTGGAAAGGTTCCGCTGCATCGTGCACCCT  444
            |||||||.|||||.||.||.|||||||||||||||||||||||.|||||.|||||||||||||||||.||||||
Sbjct   20  GCATGTCCGTGTCTGCGTCGGTTTTCACACTGGTGGCCATTGCCGTGGAGAGGTTCCGCTGCATCGTACACCCT  93

Query  445  TTCCGCGAGAAGCTGACCCTGCGGAAGGCGCTCGTCACCATCGCCGTCATCTGGGCCCTGGCGCTGCTCATCAT  518
            |||||.||||||||||||||.|||||||||||..|||||||.||.||.||||||||.|||||||||||||||||
Sbjct   94  TTCCGTGAGAAGCTGACCCTCCGGAAGGCGCTGCTCACCATAGCGGTGATCTGGGCGCTGGCGCTGCTCATCAT  167

Query  519  GTGTCCCTCGGCCGTCACGCTGACCGTCACCCGTGAGGAGCACCACTTCATGGTGGACGCCCGCAACCGCTCCT  592
            ||||||||||||.|||||.|||||||||||.||.||||||||.|||||||||.||||.||.|||||||||||||
Sbjct  168  GTGTCCCTCGGCGGTCACTCTGACCGTCACGCGAGAGGAGCATCACTTCATGCTGGATGCTCGCAACCGCTCCT  241

Query  593  ACCCTCTCTACTCCTGCTGGGAGGCCTGGCCCGAGAAGGGCATGCGCAGGGTCTACACCACTGTGCTCTTCTCG  666
            |||||||||||||.||||||||||||||||||||||||||||||||||.||||||||||.|.|||||||||.||
Sbjct  242  ACCCTCTCTACTCGTGCTGGGAGGCCTGGCCCGAGAAGGGCATGCGCAAGGTCTACACCGCCGTGCTCTTCGCG  315

Query  667  CACATCTACCTGGCGCCGCTGGCGCTCATCGTGGTCATGTACGCCCGCATCGCGCGCAAGCTCTGCCAGGCCCC  740
            ||||||||.||||||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||||||||
Sbjct  316  CACATCTATCTGGCGCCGCTGGCGCTCATCGTGGTGATGTACGCGCGCATCGCGCGCAAGCTGTGCCAGGCCCC  389

Query  741  GGGCCCGGCCCCCGGGGGCGAGGAGGCTGCGGACCCG--------CGAGCATCGCGGCGCAGAGCGCGCGTGGT  806
            .||.||.||.|.||..|..||||||||.|.||  |||        ||.||.|||||.|||||.||.||||||||
Sbjct  390  CGGTCCAGCGCGCGACGCGGAGGAGGCGGTGG--CCGAGGGTGGCCGCGCGTCGCGCCGCAGGGCCCGCGTGGT  461

Query  807  GCACATGCTGGTCATGGTGGCGCTGTTCTTCACGCTGTCCTGGCTGCCGCTCTGGGCGCTGCTGCTGCTCATCG  880
            |||.||||||||||||||||||||.||||||||..|||||||||||||.|||||||.|||||||||||||||||
Sbjct  462  GCATATGCTGGTCATGGTGGCGCTCTTCTTCACCTTGTCCTGGCTGCCACTCTGGGTGCTGCTGCTGCTCATCG  535

Query  881  ACTACGGGCAGCTCAGCGCGCCGCAGCTGCACCTGGTCACCGTCTACGCCTTCCCCTTCGCGCACTGGCTGGCC  954
            ||||||||.||||.||||.||.||||||||||.||.|..||||||||||||||||.||.||.||||||||||||
Sbjct  536  ACTACGGGGAGCTGAGCGAGCTGCAGCTGCACTTGCTGTCCGTCTACGCCTTCCCGTTGGCACACTGGCTGGCC  609

Query  955  TTCTTCAACAGCAGCGCCAACCCCATCATCTACGGCTACTTCAACGAGAACTTCCGCCGCGGCTTCCAGGCCGC  1028
            ||||||.|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  610  TTCTTCCACAGCAGCGCCAACCCCATTATCTACGGCTACTTCAACGAGAACTTCCGCCGCGGCTTCCAGGCTGC  683

Query 1029  CTTCCGCGCCCGCCTCTGCCCGCGCCCGTCGGGGAG-CCACAAGGAGGCCTACTCCGAGCGGCCCGGCGGGCTT  1101
            ||||||.||.|..||||||..||..||.| |||..| |||||||.|.|||||||||||||||||.|||.|.||.
Sbjct  684  CTTCCGGGCACAGCTCTGCTGGCTTCCCT-GGGCCGCCCACAAGCAAGCCTACTCCGAGCGGCCTGGCCGCCTC  756

Query 1102  CTGCACAGGCGGGTCTTCGTGGTGGTGCGGCCCAGCGACTCCGGGCTGCCCTCTGAGTCGGGCCCTAGCAGTGG  1175
            ||||.|||||||||..|.||||..||||..|||||||||||.||||||||.||.|||||.|||||.||||||||
Sbjct  757  CTGCGCAGGCGGGTGGTGGTGGACGTGCAACCCAGCGACTCAGGGCTGCCATCGGAGTCTGGCCCCAGCAGTGG  830

Query 1176  GGCCCCCAGGCCCGGCCGCCTCCCGCTGCGGAATGGGCGGGTGGCTCACCACGGCTTGCCC-AGGGAAGGGCCT  1248
            ||.|||..||||...|||.||.||..||||.||||||||.|||||.||||| ||.|.|||| ||||||||||||
Sbjct  831  GGTCCCAGGGCCTAACCGGCTGCCATTGCGCAATGGGCGTGTGGCCCACCA-GGATGGCCCGAGGGAAGGGCCT  903

Query 1249  GGCTGCTCCCACCTGCCCCTCACCATTCCAGCCTGGGATATC  1290
            ||||||..||||.||||||||||.||.|||||||||.|.||.
Sbjct  904  GGCTGCAACCACATGCCCCTCACTATCCCAGCCTGGAACATT  945