Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08862
Subject:
XM_006496982.3
Aligned Length:
1284
Identities:
632
Gaps:
567

Alignment

Query    1  ATGGAGCCGCTGAAGGTGGAAAAGTTCGCAACCGCCAACAGGGGAAACGGGCTGCGCGCCGTGACCCCGCTGCG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCGGAGAGCTACTCTTCCGCTCGGATCCCTTGGCGTACACGGTGTGCAAGGGGAGTCGTGGCGTCGTCTGCG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACCGCTGCCTTCTCGGGAAGGAAAAGCTGATGCGATGCTCTCAGTGCCGCGTCGCCAAATACTGTAGTGCTAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TGTCAGAAAAAAGCTTGGCCAGACCACAAGCGGGAATGCAAATGCCTTAAAAGCTGCAAACCCAGATATCCTCC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGACTCCGTTCGACTTCTTGGCAGAGTTGTCTTCAAACTTATGGATGGAGCACCTTCAGAATCAGAGAAGCTTT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ACTCATTTTATGATCTGGAGTCAAATATTAACAAACTGACTGAAGATAGGAAAGAGGGCCTCAGGCAACTCGTA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  ATGACATTTCAACATTTCATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTTTTTGA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  AGCCTTTGCAAAAGTGATCTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGAAGTTGGTGTTGGCCTAT  592
                                                             ||||||||.||.||.||||||||.|
Sbjct    1  -------------------------------------------------ATGCAGGAGGTCGGCGTTGGCCTGT  25

Query  593  ATCCCAGTATCTCTTTGCTCAATCACAGCTGTGACCCCAACTGTTCGATTGTGTTCAATGGGCCCCACCTCTTA  666
            |.||||||||.||||||||.|||||||||||||||||||||||.||.||.||.|||||.|||||||||||||||
Sbjct   26  ACCCCAGTATGTCTTTGCTGAATCACAGCTGTGACCCCAACTGCTCCATCGTATTCAACGGGCCCCACCTCTTA  99

Query  667  CTGCGAGCAGTCCGAGACATCGAGGTGGGAGAGGAGCTCACCATCTGCTACCTGGATATGCTGATGACCAGTGA  740
            |||||.|||||.||.||.||.||.|..|||||||||||||||||||||||||||||.||||||||||||||.||
Sbjct  100  CTGCGTGCAGTGCGGGAAATTGAAGCAGGAGAGGAGCTCACCATCTGCTACCTGGACATGCTGATGACCAGCGA  173

Query  741  GGAGCGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAATGTGACTGTTTCCGTTGCCAAACCCAGGACAAGG  814
            |||.|||||||||||||||||||||||||||||||||||.||||||||..||||.|||||||||||||||||||
Sbjct  174  GGAACGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAGTGTGACTGCATCCGATGCCAAACCCAGGACAAGG  247

Query  815  ATGCTGATATGCTAACTGGTGATGAGCAAGTATGGAAGGAAGTTCAAGAATCCCTGAAAAAAATTGAAGAACTG  888
            |||||||.||||||||.|||||.||||||.||||||||||.||||||||.||.|||||.|||||.|||||.|||
Sbjct  248  ATGCTGACATGCTAACGGGTGACGAGCAAATATGGAAGGAGGTTCAAGAGTCGCTGAAGAAAATCGAAGAGCTG  321

Query  889  AAGGCACACTGGAAGTGGGAGCAGGTTCTGGCCATGTGCCAGGCGATCATAAGCAGCAATTCTGAACGGCTTCC  962
            |||||.||||||||||||||||||||||||||..||||||||||||||||||.|||||||||..|.||||||||
Sbjct  322  AAGGCGCACTGGAAGTGGGAGCAGGTTCTGGCGCTGTGCCAGGCGATCATAAACAGCAATTCCAACCGGCTTCC  395

Query  963  CGATATCAACATCTACCAGCTGAAGGTGCTCGACTGCGCCATGGATGCCTGCATCAACCTCGGCCTGTTGGAGG  1036
            |||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||..||.||||||
Sbjct  396  CGACATCAACATCTACCAGCTGAAGGTGCTCGACTGTGCCATGGATGCCTGCATCAACCTGGGGATGCTGGAGG  469

Query 1037  AAGCCTTGTTCTATGGTACTCGGACCATGGAGCCATACAGGATTTTTTTCCCAGGAAGCCATCCCGTCAGAGGG  1110
            |.||.||||||||.|..|..||.|||||||||||.|||.|||||||||||||.||||||||||||||||||||.
Sbjct  470  AGGCGTTGTTCTACGCCATGCGCACCATGGAGCCGTACCGGATTTTTTTCCCTGGAAGCCATCCCGTCAGAGGT  543

Query 1111  GTTCAAGTGATGAAAGTTGGCAAACTGCAGCTACATCAAGGCATGTTTCCCCAAGCAATGAAGAATCTGAGACT  1184
            ||.||||||||||||||||||||.||||||||.|||||||||||||||||.|||||.||||||||.|||||.||
Sbjct  544  GTGCAAGTGATGAAAGTTGGCAAGCTGCAGCTCCATCAAGGCATGTTTCCTCAAGCCATGAAGAACCTGAGGCT  617

Query 1185  GGCTTTTGATATTATGAGAGTGACACATGGCAGAGAACACAGCCTGATTGAAGATTTGATTCTACTTTTAGAAG  1258
            |||.|||||.|||||||.||||||.||.|||.||||.||||||||||||||||||||||||||.||..|.||||
Sbjct  618  GGCCTTTGACATTATGAAAGTGACCCACGGCCGAGAGCACAGCCTGATTGAAGATTTGATTCTTCTCCTGGAAG  691

Query 1259  AATGCGACGCCAACATCAGAGCATCC  1284
            ||||.||.||||||||..||||.|||
Sbjct  692  AATGTGATGCCAACATACGAGCCTCC  717