Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08862
Subject:
XM_011238864.2
Aligned Length:
1286
Identities:
994
Gaps:
142

Alignment

Query    1  ATGGAGCCGCTGAAGGTGGAAAAGTTCGCAACCGCCAACAGGGGAAACGGGCTGCGCGCCGTGACCCCGCTGCG  74
            ||||||.|.||||||||||||||||||.|.||.||||||.||||||||||||||||.||.|||.|.||.|||||
Sbjct    1  ATGGAGGCACTGAAGGTGGAAAAGTTCACGACTGCCAACCGGGGAAACGGGCTGCGTGCTGTGGCTCCACTGCG  74

Query   75  CCCCGGAGAGCTACTCTTCCGCTCGGATCCCTTGGCGTACACGGTGTGCAAGGGGAGTCGTGGCGTCGTCTGCG  148
            ||||||.|||||.|||||||||||.||.||||||||.|||||.|||||||||||||||||||||||.|||||.|
Sbjct   75  CCCCGGGGAGCTGCTCTTCCGCTCCGACCCCTTGGCTTACACTGTGTGCAAGGGGAGTCGTGGCGTAGTCTGTG  148

Query  149  ACCGCTGCCTTCTCGGGAAGGAAAAGCTGATGCGATGCTCTCAGTGCCGCGTCGCCAAATACTGTAGTGCTAAG  222
            |.||||||||.||.||||||||.|||||||||||.||.|||||.|||||..|.|||||||||||.|||||.|||
Sbjct  149  ATCGCTGCCTACTGGGGAAGGAGAAGCTGATGCGTTGTTCTCAATGCCGAATTGCCAAATACTGCAGTGCCAAG  222

Query  223  TGTCAGAAAAAAGCTTGGCCAGACCACAAGCGGGAATGCAAATGCCTTAAAAGCTGCAAACCCAGATATCCTCC  296
            ||||||||||||||.|||||.|||||||..||||||||||..||.||||||||||||||.|||||||||||.||
Sbjct  223  TGTCAGAAAAAAGCCTGGCCGGACCACAGACGGGAATGCAGTTGTCTTAAAAGCTGCAAGCCCAGATATCCGCC  296

Query  297  AGACTCCGTTCGACTTCTTGGCAGAGTTGTCTTCAAACTTATGGATGGAGCACCTTCAGAATCAGAGAAGCTTT  370
            .||||||||..|||||||.|||||.|||.||.||||.||.|||||||.|...||.|||||.||||||||.||||
Sbjct  297  CGACTCCGTGAGACTTCTGGGCAGGGTTATCGTCAAGCTGATGGATGAAAAGCCCTCAGAGTCAGAGAAACTTT  370

Query  371  ACTCATTTTATGATCTGGAGTCAAATATTAACAAACTGACTGAAGATAGGAAAGAGGGCCTCAGGCAACTCGTA  444
            |.||||||||||||||||||||.|||||||.||||||.||||||||||.||||||||||||.||||||||.|.|
Sbjct  371  ATTCATTTTATGATCTGGAGTCCAATATTAGCAAACTCACTGAAGATAAGAAAGAGGGCCTGAGGCAACTTGCA  444

Query  445  ATGACATTTCAACATTTCATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTTTTTGA  518
            |||||.||||||||||||||||||||.||.||.||||||||.|||||||||||.|||.|.||||||||||||||
Sbjct  445  ATGACTTTTCAACATTTCATGAGAGAGGAGATCCAGGATGCGTCTCAGCTGCCGCCTTCTTTTGACCTTTTTGA  518

Query  519  AGCCTTTGCAAAAGTGATCTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGAAGTTGGTGTTGGCCTAT  592
            ||||||||||||||||||||||||.||.|||||.|||||.||.||||||||||||||.||.||.||||||||.|
Sbjct  519  AGCCTTTGCAAAAGTGATCTGCAATTCGTTCACTATCTGCAACGCGGAGATGCAGGAGGTCGGCGTTGGCCTGT  592

Query  593  ATCCCAGTATCTCTTTGCTCAATCACAGCTGTGACCCCAACTGTTCGATTGTGTTCAATGGGCCCCACCTCTTA  666
            |.||||||||.||||||||.|||||||||||||||||||||||.||.||.||.|||||.|||||||||||||||
Sbjct  593  ACCCCAGTATGTCTTTGCTGAATCACAGCTGTGACCCCAACTGCTCCATCGTATTCAACGGGCCCCACCTCTTA  666

Query  667  CTGCGAGCAGTCCGAGACATCGAGGTGGGAGAGGAGCTCACCATCTGCTACCTGGATATGCTGATGACCAGTGA  740
            |||||.|||||.||.||.||.||.|..|||||||||||||||||||||||||||||.||||||||||||||.||
Sbjct  667  CTGCGTGCAGTGCGGGAAATTGAAGCAGGAGAGGAGCTCACCATCTGCTACCTGGACATGCTGATGACCAGCGA  740

Query  741  GGAGCGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAATGTGACTGTTTCCGTTGCCAAACCCAGGACAAGG  814
            |||.|||||||||||||||||||||||||||||||||||.||||||||..||||.|||||||||||||||||||
Sbjct  741  GGAACGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAGTGTGACTGCATCCGATGCCAAACCCAGGACAAGG  814

Query  815  ATGCTGATATGCTAACTGGTGATGAGCAAGTATGGAAGGAAGTTCAAGAATCCCTGAAAAAAATTGAAGAACTG  888
            |||||||.||||||||.|||||.||||||.||||||||||.||||||||.||.|||||.|||||.|||||.|||
Sbjct  815  ATGCTGACATGCTAACGGGTGACGAGCAAATATGGAAGGAGGTTCAAGAGTCGCTGAAGAAAATCGAAGAGCTG  888

Query  889  AAGGCACACTGGAAGTGGGAGCAGGTTCTGGCCATGTGCCAGGCGATCATAAGCAGCAATTCTGAACGGCTTCC  962
            |||||.||||||||||||||||||||||||||..||||||||||||||||||.|||||||||..|.||||||||
Sbjct  889  AAGGCGCACTGGAAGTGGGAGCAGGTTCTGGCGCTGTGCCAGGCGATCATAAACAGCAATTCCAACCGGCTTCC  962

Query  963  CGATATCAACATCTACCAGCTGAAGGTGCTCGACTGCGCCATGGATGCCTGCATCAACCTCGGCCTGTTGGAGG  1036
            |||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||..||.||||||
Sbjct  963  CGACATCAACATCTACCAGCTGAAGGTGCTCGACTGTGCCATGGATGCCTGCATCAACCTGGGGATGCTGGAGG  1036

Query 1037  AAGCCTTGTTCTATGGTACTCGGACCATGGAGCCATACAGGATTTTTTTCCCAGGAAGCCATCCCGTCAGAGGG  1110
            |.||.||||||||.|..|..||.|||||||||||.|||.|||||||||||||.|||           ||.||  
Sbjct 1037  AGGCGTTGTTCTACGCCATGCGCACCATGGAGCCGTACCGGATTTTTTTCCCTGGA-----------CAAAG--  1097

Query 1111  GTTCAAGTG--ATGAAAGTTGGCAAACTGCAGCTACATCAAGGCATGTTTCCCCAAGCAATGAAGAATCTGAGA  1182
                |||.|  ||..|.||||             |.|.||||           |.|||..|||.||   ||   
Sbjct 1098  ----AAGAGAAATCGAGGTTG-------------AGAACAAG-----------CCAGCGGTGAGGA---TG---  1137

Query 1183  CTGGCTTTTGATATTATGAGAGTGACACATGGCAGAGAACACAGCCTGATTGAAGATTTGATTCTACTTTTAGA  1256
                                       ||.||||||                                      
Sbjct 1138  ---------------------------CAGGGCAGA--------------------------------------  1146

Query 1257  AGAATGCGACGCCAACATCAGAGCATCC  1284
                                        
Sbjct 1147  ----------------------------  1146

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