Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_08876
• Subject: NM_001286768.2
• Aligned Length: 1100
• Identities: 669
• Gaps: 427

Alignment

Query    1  ATGACTGTCCGAAACATCGCCTCCATCTGTAATATGGGCACCAATGCCTCTGCTCTGGAAAAAGACATTGGTCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGAGCAGTTTCCAATCAATGAACACTATTTCGGATTGGTCAATTTTGGAAACACATGCTACTGTAACTCCGTGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTCAGGCATTGTACTTCTGCCGTCCATTCCGGGAGAATGTGTTGGCATACAAGGCCCAGCAAAAGAAGAAGGAA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AACTTGCTGACGTGCCTGGCGGACCTTTTCCACAGCATTGCCACACAGAAGAAGAAGGTTGGCGTCATCCCACC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AAAGAAGTTCATTTCAAGGCTGAGAAAAGAGAATGATCTCTTTGATAACTACATGCAGCAGGATGCTCATGAAT  370
                                                                ||||||||||||||||||||||
Sbjct    1  ----------------------------------------------------ATGCAGCAGGATGCTCATGAAT  22

Query  371  TTTTAAATTATTTGCTAAACACTATTGCGGACATCCTTCAGGAGGAGAAGAAACAGGAAAAACAAAATGGAAAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   23  TTTTAAATTATTTGCTAAACACTATTGCGGACATCCTTCAGGAGGAGAAGAAACAGGAAAAACAAAATGGAAAA  96

Query  445  TTAAAAAATGGCAACATGAACGAACCTGCGGAAAATAATAAACCAGAACTCACCTGGGTCCATGAGATTTTTCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   97  TTAAAAAATGGCAACATGAACGAACCTGCGGAAAATAATAAACCAGAACTCACCTGGGTCCATGAGATTTTTCA  170

Query  519  GGGAACGCTTACCAATGAAACTCGATGCTTGAACTGTGAAACTGTTAGTAGCAAAGATGAAGATTTTCTTGACC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  171  GGGAACGCTTACCAATGAAACTCGATGCTTGAACTGTGAAACTGTTAGTAGCAAAGATGAAGATTTTCTTGACC  244

Query  593  TTTCTGTTGATGTGGAGCAGAATACATCCATTACCCACTGTCTAAGAGACTTCAGCAACACAGAAACACTGTGT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  245  TTTCTGTTGATGTGGAGCAGAATACATCCATTACCCACTGTCTAAGAGACTTCAGCAACACAGAAACACTGTGT  318

Query  667  AGTGAACAAAAATATTATTGTGAAACATGCTGCAGCAAACAAGAAGCCCAGAAAAGGATGAGGGTAAAAAAGCT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  319  AGTGAACAAAAATATTATTGTGAAACATGCTGCAGCAAACAAGAAGCCCAGAAAAGGATGAGGGTAAAAAAGCT  392

Query  741  GCCCATGATCTTGGCCCTGCACCTAAAGCGGTTCAAGTACATGGAGCAGCTGCACAGATACACCAAGCTGTCTT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  393  GCCCATGATCTTGGCCCTGCACCTAAAGCGGTTCAAGTACATGGAGCAGCTGCACAGATACACCAAGCTGTCTT  466

Query  815  ACCGTGTGGTCTTCCCTCTGGAACTCCGGCTCTTCAACACCTCCAGTGATGCAGTGAACCTGGACCGCATGTAT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  467  ACCGTGTGGTCTTCCCTCTGGAACTCCGGCTCTTCAACACCTCCAGTGATGCAGTGAACCTGGACCGCATGTAT  540

Query  889  GACTTGGTTGCGGTGGTCGTTCACTGTGGCAGTGGTCCTAATCGTGGGCATTATATCACTATTGTGAAAAGTCA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  541  GACTTGGTTGCGGTGGTCGTTCACTGTGGCAGTGGTCCTAATCGTGGGCATTATATCACTATTGTGAAAAGTCA  614

Query  963  CGGCTTCTGGCTTTTGTTTGATGATGACATTGTAGAGAAAATAGATGCTCAAGCTATTGAAGA--ATTCTATGG  1034
            |||||||||||||||||||||||||||||||||||||      |.||.|       |||.|||  |||||    
Sbjct  615  CGGCTTCTGGCTTTTGTTTGATGATGACATTGTAGAG------GTTGGT-------TTGCAGATTATTCT----  671

Query 1035  CCTGACGTCAGATATATCAAAAAATTCAGAATCTGGATATATTTTATTCTATCAGTCAAGAGAA  1098
            ||.|                                                            
Sbjct  672  CCAG------------------------------------------------------------  675