Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08879
- Subject:
- XM_006505030.2
- Aligned Length:
- 2806
- Identities:
- 1808
- Gaps:
- 800
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCTGTGCAGCCGTCGCCGCCCGCTGCCGCCAGTGACCCGGTGACCCCGGAGGCCCGTCTGGGCCCGGTGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGGAGCCCCGGGCATCCGGACCCCCGTCACAGGCGCAGCCGCTATTAAGGCAGGAGGCTACCAGGGAGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGGGGAGGAGACAGGCGGCCAGGGCGCCTGGGGCACCGGCACGGCTGAGCAACGGCGGCGGGGTTGGGGGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGACGAGGGCACGGGGAAGGCCGGCGGCACGGAGGCCGCAGGCTCGGACCCCTCGGCCCGCGGTTCGGGCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGGCAAGGGAGCTGGCGGCCGCTTCTCGGCTGGCTACGGCGCCCGCCGCCCCAGTGCTGCCCCTGCGCGGCGC 370
Query 1 --------------------------------------------ATGGCGGCTCTGGCCTACAACCTGGGCAAG 30
||||||||||||||||||||||||||||||
Sbjct 371 CCCTTCCCCGCTCCGCCGCGCACTGTTGTCATGGAGGAACCAAGATGGCGGCTCTGGCCTACAACCTGGGCAAG 444
Query 31 CGGGAGATCAACCACTACTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGC 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGGGAGATCAACCACTACTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGC 518
Query 105 GTGCCACCTCGCCTCCCGCCGCTACCGAGGCAATGATTCGTGTGAATACCTTCTCTCAAGTGGCAGATTTCTTG 178
||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct 519 GTGCCACCTCGCGTCCCGCCGCTACCGAGGCAATGATTCGTGTGAATACCTTCTCTCGAGCGGCAGATTTCTTG 592
Query 179 GAGAGAAAGTTTGGCAACCTCACAGTTGTATGATGCATAAATACAAAATCAGTGAAGCAAAGAACTGCCTTGTA 252
||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||..|||||||||
Sbjct 593 GAGAAAAAGTTTGGCAACCTCACAGTTGTATGATGCATAAATACAAAATAAGTGAAGCAAAGACTTGCCTTGTA 666
Query 253 GATAAACATATTGCATTTATTGGAGATTCCAGAATTCGTCAATTGTTTTATTCTTTTGTAAAAATAATTAATCC 326
||||||||.|||||.|||||||||||||||||.||.||||||||.||||||||||||||||||||.|||||.||
Sbjct 667 GATAAACACATTGCGTTTATTGGAGATTCCAGGATCCGTCAATTATTTTATTCTTTTGTAAAAATCATTAACCC 740
Query 327 CCAATTCAAAGAAGAAGGAAATAAGCATGAAAACATTCCTTTTGAAGACAAGACTGCATCAGTTAAAGTGGATT 400
|||.||.|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 741 CCAGTTTAAAGAAGAAGGAAATAAGCATGAAAACATTCCTTTTGAAGACAAGGCTGCATCAGTTAAAGTGGATT 814
Query 401 TTCTGTGGCATCCTGAAGTTAATGGTTCTATGAAACAGTGTATCAAAGTGTGGACTGAGGATTCCATTGCAAAG 474
||||.||||||||.||||||||||||||.||||||||.||||||||.||||||||||||
Sbjct 815 TTCTTTGGCATCCAGAAGTTAATGGTTCCATGAAACAATGTATCAAGGTGTGGACTGAG--------------- 873
Query 475 CCACATGTGATTGTAGCAGGAGCTGCCACATGGTCCATCAAGATTCACAATGGTAGCAGTGAAGCGCTTTCTCA 548
Sbjct 874 -------------------------------------------------------------------------- 873
Query 549 ATATAAAATGAACATCACCTCCATAGCACCACTTTTAGAAAAATTGGCAAAGACTAGTGATGTTTATTGGGTCT 622
Sbjct 874 -------------------------------------------------------------------------- 873
Query 623 TACAAGATCCTGTTTATGAAGATCTATTAAGTGAAAATAGGAAGATGATCACTAATGAGAAGATAGATGCTTAC 696
Sbjct 874 -------------------------------------------------------------------------- 873
Query 697 AATGAAGCTGCAGTCAGTATTTTGAATAGTAGCACCAGAAATTCTAAATCAAATGTTAAGATGTTCAGTGTTTC 770
Sbjct 874 -------------------------------------------------------------------------- 873
Query 771 CAAATTAATTGCTCAAGAAACCATCATGGAATCTTTGGATGGCTTACATCTTCCTGAATCGAGCAGAGAAACTA 844
|
Sbjct 874 -------------------------------------------------------------------------A 874
Query 845 CTGCAATGATTCTTATGAATGTGTATTGCAATAAGATTTTGAAGCCTGTAGATGGGTCCTGTTGTCAACCTCGG 918
.||||||||||||.|||||.|||||.||||||||..||.||||||||||.|||||.|||||||||||.||||||
Sbjct 875 GTGCAATGATTCTCATGAACGTGTACTGCAATAAAGTTGTGAAGCCTGTGGATGGTTCCTGTTGTCAGCCTCGG 948
Query 919 CCTCCTGTTACTCTCATACAGAAGCTAGCTGCTTGTTTTTTCACTTTATCTATTATCGGATATTTAATTTTTTA 992
||.|||.|.||||||||.|||||||||||||||||.||||||||||||||.|||||.||.|||||.|||||.||
Sbjct 949 CCACCTCTCACTCTCATTCAGAAGCTAGCTGCTTGCTTTTTCACTTTATCCATTATTGGGTATTTCATTTTCTA 1022
Query 993 CATAATTCATCGTAATGCTCATCGGAAGAATAAGCCGTGTACTGATTTGGAAAGTGGAGAGGAAAAGAAAAATA 1066
..|||||||||||||||||||.|||||||||||.||.||||||||||||||.|||||.|||||||||||.||||
Sbjct 1023 TGTAATTCATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGGAGAGTGGCGAGGAAAAGAAGAATA 1096
Query 1067 TTATCAATACCCCTGTGTCTTCATTAGAAATACTTTTACAATCTTTCTGCAAACTTGGCCTGATTATGGCATAT 1140
||||||||||.|||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||.|||
Sbjct 1097 TTATCAATACTCCTGTGTCTTCATTAGAAATACTTTTACAGTCTTTTTGCAAACTTGGCCTGATTATGGCTTAT 1170
Query 1141 TTCTATATGTGTGACAGTGCAAATCTGTTCATGAAGGAAAACAAATTTTATACACATTCATCTTTCTTTATTCC 1214
|||||||||||||||.|||||||.|||||.||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1171 TTCTATATGTGTGACCGTGCAAACCTGTTTATGAAGGAAAACAAATTTTATACACATTCATCATTCTTTATTCC 1244
Query 1215 AATTATCTACATTTTGGTTTTGGGAGTATTTTATAATGAAAATACTAAAGAGACTAAAGTATTAAATAGAGAAC 1288
||||||||||||.||||||||||||||||||||.||||||||.||.||||||||||||||.|||||||||||.|
Sbjct 1245 AATTATCTACATCTTGGTTTTGGGAGTATTTTACAATGAAAACACAAAAGAGACTAAAGTGTTAAATAGAGAGC 1318
Query 1289 AAACAGACGAATGGAAAGGCTGGATGCAACTTGTGATTTTGATTTATCACATTTCTGGAGCAAGTACATTTTTG 1362
||||.||.||||||||||||||||||||.||||||||||||||.||||||||.||.||||||||.||||||.||
Sbjct 1319 AAACTGATGAATGGAAAGGCTGGATGCAGCTTGTGATTTTGATCTATCACATCTCGGGAGCAAGCACATTTCTG 1392
Query 1363 CCTGTATACATGCACATTCGAGTTCTGGTTGCTGCATATTTATTTCAGACAGGGTATGGGCATTTCTCATACTT 1436
|||||.|||||||||||||||||||||||.|||||||||.|.||||||||||||||.|||||||||||.|||||
Sbjct 1393 CCTGTGTACATGCACATTCGAGTTCTGGTGGCTGCATATCTGTTTCAGACAGGGTACGGGCATTTCTCTTACTT 1466
Query 1437 TTGGATAAAAGGAGATTTTGGAATCTACAGAGTATGTCAGGTTTTATTTCGTCTCAATTTCCTGGTAGTGGTGT 1510
||||||.||||||||||||||.||..|.|||||.||||||||.|||||||||||||||||||||||.|||||||
Sbjct 1467 TTGGATCAAAGGAGATTTTGGGATTCATAGAGTGTGTCAGGTCTTATTTCGTCTCAATTTCCTGGTTGTGGTGT 1540
Query 1511 TATGTATAGTAATGGATCGACCTTATCAATTCTATTACTTTGTCCCCTTGGTCACTGTATGGTTCATGGTCATA 1584
|||||||.||||||||||||||.|||||.|||||||||||||||||||||||.||.||.|||||||||||||||
Sbjct 1541 TATGTATCGTAATGGATCGACCATATCAGTTCTATTACTTTGTCCCCTTGGTTACCGTGTGGTTCATGGTCATA 1614
Query 1585 TATGTTACTTTAGCACTATGGCCACAAATAATCCAAAAAAAAGCAAACGGAAATTGTTTCTGGCATTTTGGCTT 1658
|||||.|||||||||||.|||||||||||||.||||||.||.|||||.|||||||.|||||||.||.|.|||||
Sbjct 1615 TATGTCACTTTAGCACTGTGGCCACAAATAACCCAAAAGAAGGCAAATGGAAATTTTTTCTGGTATCTCGGCTT 1688
Query 1659 ACTGTTGAAACTAGGCTTTTTGCTGTTATTCATATGTTTTTTGGCATATTCTCAGGGTGCATTTGAGAAGATCT 1732
||||||||||||||||||..|||||.|.|.||||||.||.||||||||||||||||||||||||||||||||||
Sbjct 1689 ACTGTTGAAACTAGGCTTGCTGCTGCTGTGCATATGGTTCTTGGCATATTCTCAGGGTGCATTTGAGAAGATCT 1762
Query 1733 TTTCTCTTTGGCCATTGTCCAAGTGTTTTGAACTGAAAGGGAATGTATATGAATGGTGGTTCAGATGGAGGTTA 1806
|||||||.||||||.|.|||||.|||||||||||..||||||..||.|||||||||||||||||.||||||.||
Sbjct 1763 TTTCTCTATGGCCACTTTCCAAATGTTTTGAACTAGAAGGGAGCGTGTATGAATGGTGGTTCAGGTGGAGGCTA 1836
Query 1807 GACCGTTATGTAGTTTTCCACGGAATGCTGTTTGCTTTTATTTATCTGGCCTTGCAGAAGCGTCAAATACTTTC 1880
|||||.||.||.||.|||||.||..|.|||||||||||.|||||||||||.|||||||..||.|||||||||||
Sbjct 1837 GACCGCTACGTTGTCTTCCATGGGGTTCTGTTTGCTTTCATTTATCTGGCTTTGCAGAGACGGCAAATACTTTC 1910
Query 1881 TGAAGGAAAGGGTGAACCTCTTTTTTCAAACAAAATTTCAAATTTTCTGTTGTTTATTTCAGTAGTTTCTTTCT 1954
||||||||||||||||||.||.|||||||||||||||||.||.|||||.||||||.||||||||||.|||||||
Sbjct 1911 TGAAGGAAAGGGTGAACCACTCTTTTCAAACAAAATTTCCAACTTTCTATTGTTTGTTTCAGTAGTGTCTTTCT 1984
Query 1955 TGACCTATTCCATCTGGGCTAGCAGTTGTAAAAACAAAGCAGAGTGCAATGAACTCCATCCGTCTGTTTCTGTG 2028
|||||||||||||||||||||||||.|||||.||||||||||||||.||.||||||||.||.|||||.||||||
Sbjct 1985 TGACCTATTCCATCTGGGCTAGCAGCTGTAAGAACAAAGCAGAGTGTAACGAACTCCACCCATCTGTGTCTGTG 2058
Query 2029 GTACAGATTTTAGCCTTCATCCTAATAAGAAACATCCCTGGATATGCCCGTTCAGTTTACAGTTCATTTTTTGC 2102
|||||||||.|||||||||||||.|||||.|||||.|||||||||||||||||..|.||||||||.||||||||
Sbjct 2059 GTACAGATTGTAGCCTTCATCCTGATAAGGAACATACCTGGATATGCCCGTTCTATATACAGTTCTTTTTTTGC 2132
Query 2103 TTGGTTTGGAAAAATTTCATTAGAGCTATTTATTTGCCAGTATCACATATGGCTGGCAGCGGACACAAGGGGTA 2176
|||||||||||||||||||.|||||||.||.||.||||||||.|||||.|||||||||||.|||||||||||.|
Sbjct 2133 TTGGTTTGGAAAAATTTCACTAGAGCTGTTCATCTGCCAGTACCACATCTGGCTGGCAGCAGACACAAGGGGCA 2206
Query 2177 TCTTGGTACTGATACCTGGAAACCCTATGCTCAACATCATTGTCAGCACTTTCATATTTGTTTGTGTGGCACAT 2250
||.||||.||.||.|||||||||||.|..|||||||||||.||||||||.|||||.||.|||||||||||||||
Sbjct 2207 TCCTGGTCCTCATCCCTGGAAACCCGACACTCAACATCATCGTCAGCACGTTCATCTTCGTTTGTGTGGCACAT 2280
Query 2251 GAAATTTCTCAGATCACTAATGATCTTGCACAGATTATTATTCCTAAAGATAACTCATCTCTCTTGAAAAGGTT 2324
||.||||||||||||||.|.|||.||.||.|||.|..|||||||||||||||||.|.||||||||...||||.|
Sbjct 2281 GAGATTTCTCAGATCACCACTGACCTCGCGCAGGTCGTTATTCCTAAAGATAACCCGTCTCTCTTCCGAAGGCT 2354
Query 2325 GGCATGTATAGCTGCATTTTTTTGTGGACTCCTCATCTTATCATCCATTCAAGATAAATCAAAACAT- 2391
||||||||....||||||.|||.|||||.|||||||||||||.|||||||||||||||||||.|| |
Sbjct 2355 GGCATGTACGATTGCATTCTTTGGTGGAGTCCTCATCTTATCCTCCATTCAAGATAAATCAAGAC-TG 2421
