Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08974
- Subject:
- NM_001324292.2
- Aligned Length:
- 3186
- Identities:
- 465
- Gaps:
- 2703
Alignment
Query 1 ATGAAGTGCGTGTTTGTTACCGTAGGGACCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGGCGCCCGACAG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGTGCGTGTTTGTTACCGTAGGGACCACCAGCTTTGACGACCTCATTGCGTGTGTGTCGGCGCCCGACAG 74
Query 75 TCTGCAAAAAATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAAC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCTGCAAAAAATCGAGAGCCTTGGTTACAACCGACTTATCCTGCAAATTGGTAGAGGAACGGTGGTACCTGAAC 148
Query 149 CCTTCAGTACTGAGTCGTTTACTCTGGATGTTTACAGGTACAAGGATTCCTTGAAAGAAGACATTCAGAAAGCA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCTTCAGTACTGAGTCGTTTACTCTGGATGTTTACAGGTACAAGGATTCCTTGAAAGAAGACATTCAGAAAGCA 222
Query 223 GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGTTTGGAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GATCTTGTTATTAGTCACGCAGGTGCAGGAAGCTGTTTGGAGACTCTGGAAAAAGGAAAGCCACTCGTAGTGGT 296
Query 297 TATAAACGAAAAGTTGATGAACAATCATCAGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TATAAACGAAAAGTTGATGAACAATCATCAGCTGGAACTGGCAAAGCAGCTACACAAAGAGGGTCATCTCTTCT 370
Query 371 ATTGTACCTGCA-------------------GCACGC-----------------TTCCTGGGCTGT-------- 400
|||||||||||| |||.|| .|||||||..||
Sbjct 371 ATTGTACCTGCAGGGTCCTGACTTGTCCTGGGCAAGCCAAGTCCATTGCTTCTGCTCCTGGGAAGTGCCAAGAT 444
Query 401 --TACAG--------TCAATGGACTTATCA-----ACACT---------------GAAA--------------- 429
|.||| ||||..|.|||.||| |.||| ||.|
Sbjct 445 TCTGCAGCGCTGACTTCAACTGCCTTTTCAGGCCTAGACTTTGGGCTGCTTTCCGGATACCTGCATAAGCAAGC 518
Query 430 ---TGTT----------ATCCT-CCTGGCCAGCCAGAAAAATTTT---CT--------GCATTTT--------- 469
|||| ||||| |||| ||.||.| .|||| || ||.||||
Sbjct 519 CCTTGTTACTGCTACCCATCCTACCTG--CACCCTG----CTTTTTCCCTCTTGCCACGCTTTTTTTCCTCTCC 586
Query 470 ------------------------TGGATAAAGTTGTTGGATTACAAAAT------------------------ 495
||.|||||| |.|||| ||||.
Sbjct 587 CTCTTACCCCCACCCTGTACAAAATGCATAAAG--GATGGA----AAAACTACTGCAGCCAGAAGTCTTTGAAT 654
Query 496 -------------------------------------------------------------------------- 495
Sbjct 655 GAGGCATCAATGGATGAATATTTAGGCAGCTTAGGGCTGTTTCGAAAGCTGACTGCCAAGGATGCCTCTTGCCT 728
Query 496 -------------------------------------------------------------------------- 495
Sbjct 729 CTTTCGGGCCATTTCGGAGCAGTTGTTTTGCAGCCAGGTCCATCATTTGGAAATCAGGAAGGCTTGTGTCTCAT 802
Query 496 -------------------------------------------------------------------------- 495
Sbjct 803 ATATGAGGGAAAATCAACAAACTTTTGAGTCTTATGTGGAGGGATCTTTTGAGAAATACCTGGAACGGTTGGGA 876
Query 496 -------------------------------------------------------------------------- 495
Sbjct 877 GATCCCAAGGAAAGTGCTGGCCAGCTGGAAATAAGAGCTCTTTCTCTAATTTATAATCGGGATTTCATTCTTTA 950
Query 496 -------------------------------------------------------------------------- 495
Sbjct 951 TCGCTTTCCTGGAAAACCTCCAACTTATGTCACAGATAATGGCTATGAAGACAAGATTCTACTCTGCTACTCAA 1024
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1025 GTAGTGGTCACTATGATTCTGTGTACTCAAAACAATTTCAGTCAAGTGCAGCTGTTTGTCAGGCTGTATTGTAC 1098
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1099 GAAATTCTCTATAAAGATGTGTTTGTTGTGGATGAAGAAGAGTTGAAGACTGCGATTAAATTGTTTCGAAGTGG 1172
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1173 TTCTAAGAAGAACAGAAATAATGCTGTAACTGGAAGCGAGGATGCCCATACTGATTACAAGAGTTCAAATCAGA 1246
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1247 ATAGGATGGAAGAGTGGGGTGCCTGCTACAATGCTGAAAATATACCAGAGGGCTACAATAAAGGAACAGAAGAA 1320
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1321 ACAAAGTCTCCAGAAAATCCATCAAAGATGCCCTTCCCCTATAAGGTGCTCAAAGCCCTGGATCCAGAAATCTA 1394
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1395 TCGTAATGTAGAATTTGATGTTTGGTTGGACAGCAGAAAAGAACTTCAAAAATCTGATTACATGGAGTATGCTG 1468
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1469 GGAGACAGTACTATTTGGGAGACAAGTGTCAGGTTTGCTTGGAATCAGAAGGAAGATATTATAATGCTCATATC 1542
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1543 CAGGAAGTTGGAAATGAGAACAATTCAGTAACAGTCTTCATTGAAGAATTGGCGGAAAAGCATGTTGTTCCACT 1616
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1617 GGCTAACTTAAAACCAGTTACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCAGTCGGAAAGGAAGAG 1690
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1691 GTTACCAGAAAATGCCTGGGGGTTATGTCCCGGAAATAGTTATATCAGAGATGGACATAAAGCAACAGAAGAAG 1764
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1765 ATGTTCAAGAAAATTCGAGGGAAAGAAGTTTACATGACTATGGCTTACGGCAAGGGAGACCCCCTCCTCCCACC 1838
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1839 CAGGCTGCAGCACAGTATGCATTATGGGCACGATCCTCCAATGCACTACTCACAGACAGCTGGCAATGTTATGT 1912
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1913 CTAATGAACATTTTCATCCTCAGCATCCATCTCCGAGACAAGGTCGGGGATATGGGATGCCCAGGAATTCATCT 1986
Query 496 -------------------------------------------------------------------------- 495
Sbjct 1987 CGGTTTATAAACAGGCACAACATGCCGGGCCCTAAAGTTGATTTTTACCCAGGCCCAGGTAAAAGGTGCTGCCA 2060
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2061 GAGCTATGATAACTTCTCTTATAGATCTCGTTCATTTAGACGTAGTCACCGCCAGATGAGTTGTGTGAATAAGG 2134
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2135 AGTCCCAGTATGGATTTACCCCAGGGAATGGACAGATGCCCAGGGGCTTGGAAGAAACTATTACTTTTTATGAA 2208
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2209 GTTGAAGAAGGGGATGAGACTGCTTATCCAACTTTACCTAATCATGGAGGTCCCTCTACAATGGTTCCTGCTAC 2282
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2283 TTCAGGATACTGTGTTGGAAGGCGGGGACATAGCTCAGGCAAACAGACTTTGAATTTAGAGGAGGGCAATGGCC 2356
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2357 AGAGTGAAAATGGGCGATATCATGAAGAATATCTTTATCGTGCAGAGCCAGACTATGAAACTTCAGGTGTTTAT 2430
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2431 AGCACAACTGCATCTACAGCAAACTTGTCTCTTCAGGACAGAAAGTCATGTTCTATGTCTCCTCAGGACACAGT 2504
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2505 TACCTCATACAACTACCCCCAGAAGATGATGGGAAATATTGCAGCAGTTGCAGCTTCCTGTGCCAATAATGTTC 2578
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2579 CAGCTCCAGTCTTATCTAACGGTGCAGCGGCTAATCAAGCTATTAGTACCACTTCAGTTTCCTCACAGAATGCT 2652
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2653 ATACAGCCTCTCTTTGTATCTCCACCTACACACGGCAGGCCAGATACAAAAGTTTTGCAGTACTATTTCAATCT 2726
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2727 AGGATTGCAGTGCTATTACCACAGCTACTGGCACTCCATGGTCTATGTGCCACAGATGCAGCAGCAGCTTCATG 2800
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2801 TAGAGAATTATCCAGTCTATACTGAGCCACCTCTGGTAGATCAAACCGTTCCTCAATGCTACAGTGAGGTGAGG 2874
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2875 AGAGAAGATGGCATACAGGCGGAAGCATCAGCAAATGATACTTTTCCGAATGCTGATTCTTCATCTGTCCCTCA 2948
Query 496 -------------------------------------------------------------------------- 495
Sbjct 2949 TGGAGCAGTCTATTATCCAGTAATGTCAGATCCCTATGGGCAGCCACCTTTGCCAGGTTTTGACTCCTGCCTTC 3022
Query 496 -------------------------------------------------------------------------- 495
Sbjct 3023 CGGTTGTGCCAGATTATTCCTGTGTTCCCCCCTGGCATCCAGTTGGTACAGCATATGGTGGTTCTTCTCAAATT 3096
Query 496 -------------------------------------------------------------------------- 495
Sbjct 3097 CATGGTGCTATAAATCCTGGGCCAATTGGCTGTATTGCTCCATCTCCCCCAGCTTCTCATTATGTACCTCAGGG 3170
Query 496 ---- 495
Sbjct 3171 TATG 3174
