Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09106
- Subject:
- XM_011238410.2
- Aligned Length:
- 1500
- Identities:
- 834
- Gaps:
- 558
Alignment
Query 1 ATGAAGTGTACCGCTCGGGAGTGGCTCAGAGTAACCACAGTGCTGTTCATGGCTAGAGCAATTCCAGCCATGGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTTCCCAATGCCACTTTATTGGAGAAACTTTTGGAAAAATACATGGATGAGGATGGTGAGTGGTGGATAGCCA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AACAACGAGGGAAAAGGGCCATCACAGACAATGACATGCAGAGTATTTTGGACCTTCATAATAAATTACGAAGT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CAGGTGTATCCAACAGCCTCTAATATGGAGTATATGACATGGGATGTAGAGCTGGAAAGATCTGCAGAATCCTG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGCTGAAAGTTGCTTGTGGGAACATGGACCTGCAAGCTTGCTTCCATCAATTGGACAGAATTTGGGAGCACACT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GGGGAAGATATAGGCCCCCGACGTTTCATGTACAATCGTGGTATGATGAAGTGAAAGACTTTAGCTACCCATAT 444
||
Sbjct 1 ------------------------------------------------------------------------AT 2
Query 445 GAACATGAATGCAACCCATATTGTCCATTCAGGTGTTCTGGCCCTGTATGTACACATTATACACAGGTCGTGTG 518
|||.||||.||..||||.||.|||||.|||||.||||||||||||||.||||||||.||.||.|||
Sbjct 3 GAAAATGAGTGTGACCCTTACTGTCCTTTCAGATGTTCTGGCCCTGTTTGTACACACTACACTCAG-------- 68
Query 519 GGCAACTAGTAACAGAATCGGTTGTGCCATTAATTTGTGTCATAACATGAACATCTGGGGGCAGATATGGCCCA 592
Sbjct 69 -------------------------------------------------------------------------- 68
Query 593 AAGCTGTCTACCTGGTGTGCAATTACTCCCCAAAGGGAAACTGGTGGGGCCATGCCCCTTACAAACATGGGCGG 666
||||||||||||||||||.||.||||||||||||||..||
Sbjct 69 ----------------------------------GGGAAACTGGTGGGGCCACGCACCTTACAAACATGGAAGG 108
Query 667 CCCTGTTCTGCTTGCCCACCTAGTTTTGGAGGGGGCTGTAGAGAAAATCTGTGCTACAAAGAAGGGTCAGACAG 740
||.|||||||||||||||||.|||||||||||.||||||||||||||..|||||||||||||||||||||||||
Sbjct 109 CCTTGTTCTGCTTGCCCACCCAGTTTTGGAGGAGGCTGTAGAGAAAACTTGTGCTACAAAGAAGGGTCAGACAG 182
Query 741 GTATTATCCCCCTCGAGAAGAGGAAACAAATGAAATAGAACGACAGCAGTCACAAGTCCATGACACCCATGTCC 814
|||||||.|||||||||||||.||||||||||||||.|||||.||||||||.||.|||||||||||||||||.|
Sbjct 183 GTATTATACCCCTCGAGAAGAAGAAACAAATGAAATTGAACGGCAGCAGTCTCAGGTCCATGACACCCATGTTC 256
Query 815 GGACAAGATCAGATGATAGTAGCAGAAATGAAGTCATAAGCGCACAGCAAATGTCCCAAATTGTTTCTTGTGAA 888
|.||||||||||||||.|||..|||||||||.|||||.|||.|.|||||.|||||.||.|||||||||||||||
Sbjct 257 GAACAAGATCAGATGACAGTGACAGAAATGACGTCATCAGCACTCAGCAGATGTCTCAGATTGTTTCTTGTGAA 330
Query 889 GTAAGATTAAGAGATCAGTGCAAAGGAACAACCTGCAATAGGTACGAATGTCCTGCTGGCTGTTTGGATAGTAA 962
||||||||.|||||.|||||.|||||.||.||||||||.|||||.||.||.|||||.|||||.|||||.|||||
Sbjct 331 GTAAGATTGAGAGACCAGTGTAAAGGGACCACCTGCAACAGGTATGAGTGCCCTGCAGGCTGCTTGGACAGTAA 404
Query 963 AGCTAAAGTTATTGGCAGTGTACATTATGAAATGCAATCCAGCATCTGTAGAGCTGCAATTCATTATGGTATAA 1036
|||||||||.|||||.||||||||||||||||||||||||||.|||||..|||||||.||.||.|||||.||||
Sbjct 405 AGCTAAAGTAATTGGGAGTGTACATTATGAAATGCAATCCAGTATCTGCCGAGCTGCCATCCACTATGGGATAA 478
Query 1037 TAGACAATGATGGTGGCTGGGTAGATATCACTAGACAAGGAAGAAAGCATTATTTCATCAAGTCCAATAGAAAT 1110
||||||||||.|||||.|||||||||.|||||.|||||||.|||||||||||.||||||||.|||||.||||||
Sbjct 479 TAGACAATGAAGGTGGGTGGGTAGATGTCACTCGACAAGGGAGAAAGCATTACTTCATCAAATCCAACAGAAAT 552
Query 1111 GGTATTCAAACAATTGGCAAATATCAGTCTGCTAATTCCTTCACAGTCTCTAAAGTAACAGTTCAGGCTGTGAC 1184
||.||||||||||||||.||||||||.|||||||||||||||||||||||.|||||.||||||||.||||||||
Sbjct 553 GGCATTCAAACAATTGGAAAATATCATTCTGCTAATTCCTTCACAGTCTCCAAAGTTACAGTTCAAGCTGTGAC 626
Query 1185 TTGTGAAACAACTGTGGAACAGCTCTGTCCATTTCATAAGCCTGCTTCACATTGCCCAAGAGTATACTGTCCTC 1258
.||||||||.||.||||||||||||||||||||.||||||||||||||.||||||||.|||||.||||||||||
Sbjct 627 CTGTGAAACTACAGTGGAACAGCTCTGTCCATTCCATAAGCCTGCTTCTCATTGCCCCAGAGTGTACTGTCCTC 700
Query 1259 GTAACTGTATGCAAGCAAATCCACATTATGCTCGTGTAATTGGAACTCGAGTTTATTCTGATCTGTCCAGTATC 1332
|.|||||||||||..|||||||||||||||||||||||||.||.||..||.||||||||||||||||.||||||
Sbjct 701 GAAACTGTATGCAGTCAAATCCACATTATGCTCGTGTAATCGGGACCAGAATTTATTCTGATCTGTCTAGTATC 774
Query 1333 TGCAGAGCAGCAGTACATGCTGGAGTGGTTCGAAATCACGGTGGTTATGTTGATGTAATGCCTGTGGACAAAAG 1406
|||||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||.|||||||||||.|||||
Sbjct 775 TGCAGAGCAGCGGTGCATGCTGGGGTGGTTCGAAATCATGGTGGTTATGTGGATGTCATGCCTGTGGATAAAAG 848
Query 1407 AAAGACCTACATTGCTTCTTTTCAGAATGGAATCTTCTCAGAAAGTTTACAGAATCCTCCAGGAGGAAAGGCAT 1480
|||||..||||.|||||||||||||||||||||.||||||||||||||||||||.|||.|||||||||||||||
Sbjct 849 AAAGATGTACACTGCTTCTTTTCAGAATGGAATATTCTCAGAAAGTTTACAGAACCCTACAGGAGGAAAGGCAT 922
Query 1481 TCAGAGTGTTTGCTGTTGTG 1500
||.|.||.||.||||||||.
Sbjct 923 TCCGTGTATTCGCTGTTGTT 942
