Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09106
Subject:
XM_011238410.2
Aligned Length:
1500
Identities:
834
Gaps:
558

Alignment

Query    1  ATGAAGTGTACCGCTCGGGAGTGGCTCAGAGTAACCACAGTGCTGTTCATGGCTAGAGCAATTCCAGCCATGGT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGTTCCCAATGCCACTTTATTGGAGAAACTTTTGGAAAAATACATGGATGAGGATGGTGAGTGGTGGATAGCCA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AACAACGAGGGAAAAGGGCCATCACAGACAATGACATGCAGAGTATTTTGGACCTTCATAATAAATTACGAAGT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CAGGTGTATCCAACAGCCTCTAATATGGAGTATATGACATGGGATGTAGAGCTGGAAAGATCTGCAGAATCCTG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GGCTGAAAGTTGCTTGTGGGAACATGGACCTGCAAGCTTGCTTCCATCAATTGGACAGAATTTGGGAGCACACT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GGGGAAGATATAGGCCCCCGACGTTTCATGTACAATCGTGGTATGATGAAGTGAAAGACTTTAGCTACCCATAT  444
                                                                                    ||
Sbjct    1  ------------------------------------------------------------------------AT  2

Query  445  GAACATGAATGCAACCCATATTGTCCATTCAGGTGTTCTGGCCCTGTATGTACACATTATACACAGGTCGTGTG  518
            |||.||||.||..||||.||.|||||.|||||.||||||||||||||.||||||||.||.||.|||        
Sbjct    3  GAAAATGAGTGTGACCCTTACTGTCCTTTCAGATGTTCTGGCCCTGTTTGTACACACTACACTCAG--------  68

Query  519  GGCAACTAGTAACAGAATCGGTTGTGCCATTAATTTGTGTCATAACATGAACATCTGGGGGCAGATATGGCCCA  592
                                                                                      
Sbjct   69  --------------------------------------------------------------------------  68

Query  593  AAGCTGTCTACCTGGTGTGCAATTACTCCCCAAAGGGAAACTGGTGGGGCCATGCCCCTTACAAACATGGGCGG  666
                                              ||||||||||||||||||.||.||||||||||||||..||
Sbjct   69  ----------------------------------GGGAAACTGGTGGGGCCACGCACCTTACAAACATGGAAGG  108

Query  667  CCCTGTTCTGCTTGCCCACCTAGTTTTGGAGGGGGCTGTAGAGAAAATCTGTGCTACAAAGAAGGGTCAGACAG  740
            ||.|||||||||||||||||.|||||||||||.||||||||||||||..|||||||||||||||||||||||||
Sbjct  109  CCTTGTTCTGCTTGCCCACCCAGTTTTGGAGGAGGCTGTAGAGAAAACTTGTGCTACAAAGAAGGGTCAGACAG  182

Query  741  GTATTATCCCCCTCGAGAAGAGGAAACAAATGAAATAGAACGACAGCAGTCACAAGTCCATGACACCCATGTCC  814
            |||||||.|||||||||||||.||||||||||||||.|||||.||||||||.||.|||||||||||||||||.|
Sbjct  183  GTATTATACCCCTCGAGAAGAAGAAACAAATGAAATTGAACGGCAGCAGTCTCAGGTCCATGACACCCATGTTC  256

Query  815  GGACAAGATCAGATGATAGTAGCAGAAATGAAGTCATAAGCGCACAGCAAATGTCCCAAATTGTTTCTTGTGAA  888
            |.||||||||||||||.|||..|||||||||.|||||.|||.|.|||||.|||||.||.|||||||||||||||
Sbjct  257  GAACAAGATCAGATGACAGTGACAGAAATGACGTCATCAGCACTCAGCAGATGTCTCAGATTGTTTCTTGTGAA  330

Query  889  GTAAGATTAAGAGATCAGTGCAAAGGAACAACCTGCAATAGGTACGAATGTCCTGCTGGCTGTTTGGATAGTAA  962
            ||||||||.|||||.|||||.|||||.||.||||||||.|||||.||.||.|||||.|||||.|||||.|||||
Sbjct  331  GTAAGATTGAGAGACCAGTGTAAAGGGACCACCTGCAACAGGTATGAGTGCCCTGCAGGCTGCTTGGACAGTAA  404

Query  963  AGCTAAAGTTATTGGCAGTGTACATTATGAAATGCAATCCAGCATCTGTAGAGCTGCAATTCATTATGGTATAA  1036
            |||||||||.|||||.||||||||||||||||||||||||||.|||||..|||||||.||.||.|||||.||||
Sbjct  405  AGCTAAAGTAATTGGGAGTGTACATTATGAAATGCAATCCAGTATCTGCCGAGCTGCCATCCACTATGGGATAA  478

Query 1037  TAGACAATGATGGTGGCTGGGTAGATATCACTAGACAAGGAAGAAAGCATTATTTCATCAAGTCCAATAGAAAT  1110
            ||||||||||.|||||.|||||||||.|||||.|||||||.|||||||||||.||||||||.|||||.||||||
Sbjct  479  TAGACAATGAAGGTGGGTGGGTAGATGTCACTCGACAAGGGAGAAAGCATTACTTCATCAAATCCAACAGAAAT  552

Query 1111  GGTATTCAAACAATTGGCAAATATCAGTCTGCTAATTCCTTCACAGTCTCTAAAGTAACAGTTCAGGCTGTGAC  1184
            ||.||||||||||||||.||||||||.|||||||||||||||||||||||.|||||.||||||||.||||||||
Sbjct  553  GGCATTCAAACAATTGGAAAATATCATTCTGCTAATTCCTTCACAGTCTCCAAAGTTACAGTTCAAGCTGTGAC  626

Query 1185  TTGTGAAACAACTGTGGAACAGCTCTGTCCATTTCATAAGCCTGCTTCACATTGCCCAAGAGTATACTGTCCTC  1258
            .||||||||.||.||||||||||||||||||||.||||||||||||||.||||||||.|||||.||||||||||
Sbjct  627  CTGTGAAACTACAGTGGAACAGCTCTGTCCATTCCATAAGCCTGCTTCTCATTGCCCCAGAGTGTACTGTCCTC  700

Query 1259  GTAACTGTATGCAAGCAAATCCACATTATGCTCGTGTAATTGGAACTCGAGTTTATTCTGATCTGTCCAGTATC  1332
            |.|||||||||||..|||||||||||||||||||||||||.||.||..||.||||||||||||||||.||||||
Sbjct  701  GAAACTGTATGCAGTCAAATCCACATTATGCTCGTGTAATCGGGACCAGAATTTATTCTGATCTGTCTAGTATC  774

Query 1333  TGCAGAGCAGCAGTACATGCTGGAGTGGTTCGAAATCACGGTGGTTATGTTGATGTAATGCCTGTGGACAAAAG  1406
            |||||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||.|||||||||||.|||||
Sbjct  775  TGCAGAGCAGCGGTGCATGCTGGGGTGGTTCGAAATCATGGTGGTTATGTGGATGTCATGCCTGTGGATAAAAG  848

Query 1407  AAAGACCTACATTGCTTCTTTTCAGAATGGAATCTTCTCAGAAAGTTTACAGAATCCTCCAGGAGGAAAGGCAT  1480
            |||||..||||.|||||||||||||||||||||.||||||||||||||||||||.|||.|||||||||||||||
Sbjct  849  AAAGATGTACACTGCTTCTTTTCAGAATGGAATATTCTCAGAAAGTTTACAGAACCCTACAGGAGGAAAGGCAT  922

Query 1481  TCAGAGTGTTTGCTGTTGTG  1500
            ||.|.||.||.||||||||.
Sbjct  923  TCCGTGTATTCGCTGTTGTT  942

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