Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09121
- Subject:
- XR_001737282.1
- Aligned Length:
- 2502
- Identities:
- 1812
- Gaps:
- 613
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGTGTGTGGCGCCTGCGCAGTGGCGGTGACCACCGGCTCGCGGCGCGTGGAGGCTGCTCCCAGCCGCGCGCGA 74
Query 1 ----------------------------------------------------ATGTCGTGGCTCTTCGGCGTTA 22
||||||||||||||||||.|||
Sbjct 75 GTCAGACTCGGGTGGGGGTCCCGGCGGCGGTAGCGGCGGCGGCGGTGCGAGCATGTCGTGGCTCTTCGGCATTA 148
Query 23 ACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCGCCCGCGCAGCCCGGGGCCGAGGGCGGC 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCGCCCGCGCAGCCCGGGGCCGAGGGCGGC 222
Query 97 GGGGACCGCGGTTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACTTCGACCCCACCGGCCTGGAGCG 170
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGGACCGCGGGTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACTTCGACCCCACCGGCCTGGAGCG 296
Query 171 CGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTACGCCAAGGAGGCCCTGAATCTGGCGCAGATGCAGG 244
|||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||.||||||||||
Sbjct 297 CGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTATGCCAAGGACGCCCTGAATCTGGCACAGATGCAGG 370
Query 245 AGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAG 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAG 444
Query 319 CAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCCGGCAGCACCAGGCCAGGGCCCA 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCCGGCAGCACCAGGCCAGGGCCCA 518
Query 393 GTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAGCGACTTCTCAATGAGGAGAATT 466
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 519 GTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAGCAACTTCTCAATGAGGAGAATT 592
Query 467 TACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTG 666
Query 541 CGGCACAAGAATGAGATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGA 614
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGGCACAAGAATGAGATGCTGCGAGTGGAGGCCGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGA 740
Query 615 CATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTG 688
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CATCATCCGCGAGCAGATCCGCCTGAAGGCGGCCGAGCACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTG 814
Query 689 GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAGTGACAGCCACGGTGGCTGGGCTG 762
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 815 GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACTGGGACAAAGTGACAGCCACGGTGGCTGGGCTG 888
Query 763 ACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGC-CGTCACTGGCCGCTTCATCGAGGCTCGGC 835
||||||||||||||.|||||||||||||||||||||||.|| || .|||.|.||||||||||||||||||||||
Sbjct 889 ACGCTGCTGGCTGTTGGGGTCTACTCAGCCAAGAATGCCAC-GCTTGTCGCCGGCCGCTTCATCGAGGCTCGGC 961
Query 836 TGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGCGCTGCGGCACCCCATCCAGGTC 909
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 962 TGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTTGAGGCGCTGCGGCACCCCATCCAGGTC 1035
Query 910 AGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGCTTAGTCCCAGCCTGGAAGCACGGGT 983
|||||||||||||||||||||||||||||||.||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1036 AGCCGGCGGCTCCTCAGTCGACCCCAGGACGCGCTGGAGGGTGTTGTGCTCAGTCCCAGCCTGGAAGCACGGGT 1109
Query 984 GCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGAACCGGGGCCTGTACAGGCACATCCTGCTGTATGGGC 1057
|||||||||||||||||||||.||||||||||||||||||||..|||||||||||.||||||||.||||.||||
Sbjct 1110 GCGCGACATCGCCATAGCAACAAGGAACACCAAGAAGAACCGCAGCCTGTACAGGAACATCCTGATGTACGGGC 1183
Query 1058 CACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGCATGGACTACGCCATCATGACA 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 CACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGCATGGACTACGCCATCATGACA 1257
Query 1132 GGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCTCTTTGACTGGGCCAATACCAG 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 GGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCTCTTTGACTGGGCCAATACCAG 1331
Query 1206 CCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAGACGCCTTCCTTCGGAAGCGAGCCACTGAGGAGATAAGCA 1279
|||||||||||||||||||||..||||||||||.||||||||||||||||||||||||||.|||.||||||||.
Sbjct 1332 CCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTTCCTTCGGAAGCGAGCCACCGAGAAGATAAGCG 1405
Query 1280 AGGACCTCAGAGCCACACTGAACGCCTTCCTGTACCACATGGGCCAACACAGCAACAAATTCATGCTGGTCCTG 1353
||||||||||.|||||||||||||||||||||||||.||.||||||.|||||||||||.|||||||||||||||
Sbjct 1406 AGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGGGCCAGCACAGCAACAAGTTCATGCTGGTCCTG 1479
Query 1354 GCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCATCAACAGCCGCATTGACGTGATGGTCCACTTCGACCTGCC 1427
||||||||.|..||.||||||||||||||.||||||||...||||||..|.|.|||||||||||||||||||||
Sbjct 1480 GCCAGCAACCAACCAGAGCAGTTCGACTGGGCCATCAATGACCGCATCAATGAGATGGTCCACTTCGACCTGCC 1553
Query 1428 GCAGCAGGAGGAGCGGGAGCGCCTGGTGAGACTGCATTTTGACAACTGTGTTCTTAAGCCGGCCACAGAAGGAA 1501
...|||||||||.|||||||||||
Sbjct 1554 AGGGCAGGAGGAACGGGAGCGCCT-------------------------------------------------- 1577
Query 1502 AACGGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATG 1575
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1578 ---GGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATG 1648
Query 1576 TCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCATATGCCTCCAAGGACGGGGTCCTCAC 1649
|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||.|||||||||||||.||
Sbjct 1649 TCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCGTATGCCTCCGAGGACGGGGTCCTGAC 1722
Query 1650 TGAGGCCATGATGGACGCCTGTGTGCAAGATGCTGTCCAGCAGTACCGACAGAAGATGCGCTGGCTGAAGGCGG 1723
.|||||||||||||||.||.|.|||||||||||||||||||||.|||..|||||||||.|||||||||||||||
Sbjct 1723 CGAGGCCATGATGGACACCCGCGTGCAAGATGCTGTCCAGCAGCACCAGCAGAAGATGTGCTGGCTGAAGGCGG 1796
Query 1724 AGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGAGTCCA-AGGCGAGACCCTCACCTCATGGAGCCTGGC 1796
|.|||||||||||.||||.|||||.|.|||.||||.||||||| ||| ||||.||.||.||||.||||||||||
Sbjct 1797 AAGGGCCTGGGCGTGGGGACGAGCCCTCCCCATCCTGAGTCCACAGG-GAGATCCACAGCTCACGGAGCCTGGC 1869
Query 1797 CACGGACCCCTCCTACCCCTGCCTTGCCGGCCCCTGCACATTTAGGATATGCTCCTGGATGGGGACTGGGCTGT 1870
|.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1870 CGCGGACCCCTCCCACCCCTGCCTTGCCGGCCCCTGCACATTTAGGATATGCTCCTGGGTGGGGACTGGGCTGT 1943
Query 1871 GCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGGCGGTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTG 1944
||||||||||||||||||||||||||||||||||||..||||||||||||||||||||||||||||||||||||
Sbjct 1944 GCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGCGGGTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTG 2017
Query 1945 -------------------------------------------------------------------------- 1944
Sbjct 2018 TAGGCACTGGCTAGGGAGGGGCAGGCCTCCTTCCTGCCCCTCGAGACACTCTTGGGAGATGCATTTTCCGTCTG 2091
Query 1945 -------------------------------------------------------------------------- 1944
Sbjct 2092 GCTCACAGGGGGAGGGTGAGGCTTTGCACCCCAGCCCCTGCCCAGGCCACTGTGAGGGTGGGTGCTGGCTGAGC 2165
Query 1945 -------------------------------------------------------------------------- 1944
Sbjct 2166 CCCCGGGGCAGCAGGAGCCAGGCAGGTGATGTCTTTGTTCTCGGCTCCCACAGCAGAGCCAGGTGAGGGGGCGC 2239
Query 1945 -------------------------------------------------------------------------- 1944
Sbjct 2240 CTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGAACCCTGCTTCCCCCTGTGGCCGGCATGCCCCGATCTTTCAC 2313
Query 1945 -------------------------------------------------------------------------- 1944
Sbjct 2314 ACACTGGTGACCCTGAGAGAGGAGGGAGGAGGGAACCTGGCGGGGGTGTCTGAGGCCGCACTGTCAGCTGGCCG 2387
Query 1945 ------------------------------------------------------------ 1944
Sbjct 2388 GTCCAAGCCTGTGGCTGGAGCTGGGGTCTGTTTACCTAATAAAGTCCCACAGGTGCCTCA 2447
