Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09177
- Subject:
- NR_026587.1
- Aligned Length:
- 3780
- Identities:
- 365
- Gaps:
- 3387
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCAGGCTCGCCGCGGGGCGCTGAGCAGGCCGGGACACCGCGGCCGAGGTTATCGTTAGGCATCTCCCAGGCGA 74
Query 1 ----------------ATGGCGGACGAGAAGGACAGGGAAGAGATAATAGTAGCAGAATTTCACAAAAAAATCA 58
|||||||||||||||||||||||
Sbjct 75 CCGGCTCCGCAGCAAGATGGCGGACGAGAAGGACAGGGA----------------------------------- 113
Query 59 AAGAGGCATTTGAAGTCTTTGACCATGAGTCGAATAATACAGTGGATGTGAGAGAGATTGGAACAATTATCAGG 132
||||||||||||||||||||||||
Sbjct 114 --------------------------------------------------AGAGAGATTGGAACAATTATCAGG 137
Query 133 TCATTAGGATGCTGTCCTACGGAAGGAGAGCTGCATGATCTGATTGCAGAGGTAGAGGAAGAAGAACCTACTGG 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 138 TCATTAGGATGCTGTCCTACGGAAGGAGAGCTGCATGATCTGATTGCAGAGGTAGAGGAAGAAGAACCCACTGG 211
Query 207 ATACATTCGATTCGAAAAATTTCTTCCGGTGATGACAGAAATACTACTAGAAAGAAAATACAGACCAATTCCAG 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 ATACATTCGATTCGAAAAATTTCTTCCGGTGATGACAGAAATACTACTAGAAAGAAAATACAGACCAATTCCAG 285
Query 281 AAGATGTCCTTCTTCGAGCTTTTGAGGTTTTAGATTCAGCTAAACGTGGGTTTCTTACTAAGGACGAGCTGATC 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 286 AAGATGTCCTTCTTCGAGCTTTTGAGGTTTTAGATTCAGCTAAACGTGGGTTTCTTACTAAGGACGAGCTGATC 359
Query 355 AAGTATATGACTGAAGAAGGT-GAGCCTTTTTCT--------CAAGAGGAAATG----GAAGAAATGTTGTCT- 414
|||||||||||||||||||.| ||| |||..|| ||.|..|||.|| |..|..||.|||.||
Sbjct 360 AAGTATATGACTGAAGAAGATGGAG--TTTCGCTCCGTCGCCCAGGCTGAAGTGCAGTGGCGTGATCTTGGCTC 431
Query 415 GCTGCAATTGATCCA-------GAATCAA---ATTC---------------------------AAT-------- 443
|.||||| ..|||| |..|||| |||| .||
Sbjct 432 GTTGCAA--CCTCCACCTCCCGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCTGAGCAGCTGGGATGACAGGCA 503
Query 444 ------------------TAATT------------------ACAAGGACTATATAACAATG--ATGGTGA---- 475
||||| ||..|| |.|.||.||| .||||||
Sbjct 504 CACACCACCACGCCTGGCTAATTTCTGTATTTTTAGTAGAGACGGGG----TTTCACCATGGTCTGGTGACCTC 573
Query 476 ------TAGA-----TGA----AAAT------------------------------------------------ 486
|.|| ||| ||.|
Sbjct 574 CTGGTCTCGAACTCCTGACCTCAAGTGATCCTCCCGCCTCAGCCTCCCAAAGTTCTGGGATTACAGGCATGAGC 647
Query 487 -------------------------------------------------------------------------- 486
Sbjct 648 CACCGCACCCGGCTGCTTCCTTAACTCTTGATCTCCTCTCTGTATCTTGCTTTGTCTAGCTGTTCTCTTCTCTC 721
Query 487 -------------------------------------------------------------------------- 486
Sbjct 722 CATATTCATCCAAACATTTGCTTAGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGT 795
Query 487 -------------------------------------------------------------------------- 486
Sbjct 796 GAAGAAACGAGGCAGAGTGACTTAGTAGCAAGTGACAGCACACAGTTTAAATTTTAATATTAGCCCATTTACAA 869
Query 487 -------------------------------------------------------------------------- 486
Sbjct 870 ACAACAGCTTATATAATAGTCATTCACATACCTCAACACTCACCATCCCCTCCCCACTTTTTTTCTGGAGACAG 943
Query 487 -------------------------------------------------------------------------- 486
Sbjct 944 GGTTTCACTGTCACCCCAGCTGGAATGCAGGTGGCATGATCACAGCTCACTGTAGCATCGACCTCCTGGACTCA 1017
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1018 AGGGGTCCTCGCGCCTCAGCCTCCTGAGTAGCTGGGACCACAGGTGCATGCCACCACGCCCAGCTAATGTTTTT 1091
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1092 TTTTATTTTTTGTAGAGACAGGGTCTGGCTATGTTGCTTAGGCTGGTCTCAAACTCCTGGGTTCAAGCGATCCT 1165
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1166 GCCACCTCAGCCTCCCAAAGTGTTAGGATTACAGATGTGAGCCACTGTGCCCAGCCAACATTCACCCCATTCAA 1239
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1240 GTGTGCAATTCAATGGATTCTAGTATCTTCACAGTGCTGTGCAACTATCACTCCTATCTACTTACAAAGCATTT 1313
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1314 CCATCATCTTAAAAAGAATCCCCATGTCCAATAGCAGTTCCCCTTCCCCCACCGTCATCCTCGGGCAACCGCTA 1387
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1388 ATCTTCCTGTGTGTCTGTGGATTTGCCTCTTCAGGGCATTTCACATAAACACAATCATACAATATGTGGCCTTC 1461
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1462 TGTGTCTGGCTTCTTTCATTTAGTGTAAGGCTTTTGAGGTTCATCCATGTTGTAATGTATATCCTTAGTTCATT 1535
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1536 CTTTTTTGTTAAGCTCACAAATAAAAAGCCTCACTTTTTATTTGAGGCAAGGAGACTGGCTACAGGGATTACAG 1609
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1610 TTCCAGCAGTCAAAACGCAACTCCAAGTGGCACTATTTGGACCGTAGGTTTTGCTTCATTTTGGCTGGAAAAGG 1683
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1684 GTATTCAGGATGTACTTCTCCCAGCCGGACAAGAAAAAGGGCAAAGAAAACTGGAAGAGACGTCTCGTCTACAC 1757
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1758 AAACTGCTCTTTGGACACAGCATCAACCTGACCACACCCGTGCTGGCCAGTCTGCAGGTTGCTGACCCGCCGTT 1831
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1832 AAGGGACACAGGCCATACTACACTTGCTAGAAAAACTGAGGCAGGAAAAAGAGGTGCAAGGCACTGGGGGAAGA 1905
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1906 GCAGGTACCTATAGCTTTAAAGCTCAGTGTTGAAGGGGTAATCCTTGCAGGAGGCACAGCTCACCAAGACACAG 1979
Query 487 -------------------------------------------------------------------------- 486
Sbjct 1980 ACCCTCCCGTTCCTGTTGTAGCTGACTACAGTGGTCACATCAGGCTGCTCAGTTGAAAGTCGAAGTCCTCCAAG 2053
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2054 TTTTCAGCAGTGCGTTCCAGCATCACCACCGAAATGATGATAGGAATTACCACCAAATTCCTATGCATGGGAAA 2127
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2128 CCAGATCAGAACCTGGGCTGCGTTTTTATTTGTTTATTTTTTTTACTGTGCTTGGCTGTGATTGCTTTGGTGCT 2201
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2202 GGGATCCCCCAGACCTGTCACGAGAGCTGAGGGGACTACAGGCAGTCACCACCTTGCCTTTGGATTGGCAGCCC 2275
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2276 TGGATTAACTTCTCCTGAGGTGGGTGCAGGTGGCACTCACTGTGGTTAACCACTGTTTTTAAGCCAGGTTTCTT 2349
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2350 TTTTTCTGTCTGTCATATATATATATATATATTTAGAGACAGGGTCTCACTCTATCACTCAGGCCTGGAGTGTA 2423
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2424 GTGGCATGATCATAACTCACTGCAGCCTCGAGTTCCTGGGCTCAAGTGATCCTCCCGCCTTGGCCTCCCAAAGT 2497
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2498 GCTGGGATTACAGGCTGAGACACCACACCTGGTCTTAAGCCAGGTTTCTTTACCATCTCTTGGAGATGGCTGCA 2571
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2572 GTTGGAGATTCCAAAAGCTTTCAGAGCCCTTCATCCACCAGCTCCTCCATGTGGCCACCCATGTGACATGAAGT 2645
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2646 TGGTGTCACTAGGTACCACGTTGTCTGTCCCATCCAACAGGAAAAATAGCCTGTTGGCCAGTGAATAAGGTAGG 2719
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2720 AATCCAGGTGGTCCCCTGAGGGTCTTCTGACAGGCTCCTTTATCAGGCTCTTCTCATGGTATGAGCACCGCAGC 2793
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2794 TTGCTGACAGTGGCAACGTTCTCAAGCTTCACAGACTCCGTCACTTGGCCTGGAGGGGAATTCTAGGTGTCCAG 2867
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2868 CCCCAGGACAGGCATTTTGGCACCATGATTGAGCACGATATGGTGAGCCATCCTCACAGGATTAAGAAGAATTC 2941
Query 487 -------------------------------------------------------------------------- 486
Sbjct 2942 TGGACAGAAATATAGTTGTAAGTAAGCATCAGTCAGCCTGCACTTTGACCCACTTCCTTGTAACCAACAGTGAC 3015
Query 487 -------------------------------------------------------------------------- 486
Sbjct 3016 GTAGCACTAGGTAACATTTGCATCCCCGTTGTTCCTATAGATACAATTTCTGACCTTAGAATCACAAGGCTTTT 3089
Query 487 -------------------------------------------------------------------------- 486
Sbjct 3090 GTTTAAAATAGATGGGATCTCTGACATTAGAATCATAAGATTTTTGTTTAAGACTTGCTTAAGATGTTTTTCAG 3163
Query 487 -------------------------------------------------------------------------- 486
Sbjct 3164 ATCCTGAATTCCAGCAAAACAGCCGACACCAACCAGTTTGAAGACCCCCACAGAGGAATGTGATCAGCATGAAA 3237
Query 487 -------------------------------------------------------------------------- 486
Sbjct 3238 ATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGACCAATCAACCATCTCCACACTCCAGTC 3311
Query 487 -------------------------------------------------------------------------- 486
Sbjct 3312 TCCACTCCCAAACCCTTAAAAACCCCAGCCCCAAACTCCTCAGGGAGATGGATTTGACGTTTCCTCCCATTTCC 3385
Query 487 -------------------------------------------------------------------------- 486
Sbjct 3386 TCCTTCGGTGGCCCTACGATGAAACCTCTTTCTCTGCTACAACCCTATGCCTCGGCGTATTCACTTTCTGGTCC 3459
Query 487 -------------------------------------------------------------------------- 486
Sbjct 3460 CATCCAGCGATGGACCCATCGTGGTTACCGTGGCTGGCCAAGCCTGCTGTGCTTCACAGACCCCACTCAGGATC 3533
Query 487 -------------------------------------------------------------------------- 486
Sbjct 3534 ACACCACTTCGTTCCACTGTTTGGAGATGCCATGTTTGCTTATCCCTTCATCAGCTGATGAGCATTTGTGCTGT 3607
Query 487 -------------------------------------------------------------------------- 486
Sbjct 3608 TTTCACTTTTTGGCTATTACGAAAATGTTGCTACGAGCATCCATGATATTCGCCCATTTAAAAAAGTGTTTTTC 3681
Query 487 ------ 486
Sbjct 3682 ACCATT 3687
