Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09191
- Subject:
- XM_006503926.3
- Aligned Length:
- 2092
- Identities:
- 722
- Gaps:
- 1262
Alignment
Query 1 ATGAGTGCAGTGTCGCAGCCCCAGGCTGCTCCCAGCCCGCTGGAGAAGTCGCCCAGCACGGCGATCCTGTGCAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CACGTGTGGGAATGTGTGCAAGGGCGAGGTGCTGCGGGTGCAGGACAAGTACTTCCACATCAAGTGCTTCGTCT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTAAAGCATGTGGCTGCGACCTGGCCGAGGGCGGCTTCTTCGTGCGGCAGGGCGAGTACATCTGCACGCTGGAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TACCAGAGGCTCTACGGCACCCGCTGCTTCAGCTGCGACCAGTTCATTGAGGGTGAGGTGGTGTCGGCGCTGGG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAAGACCTACCACCCCGACTGCTTCGTGTGTGCCGTCTGCCGGCTGCCCTTCCCCCCCGGGGACCGAGTGACCT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCAACGGGAAGGAATGCATGTGCCAGAAGTGTTCCCTGCCCGTATCGGTGGGCAGCAGCGCGCACCTGTCCCAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGCCTCCGAAGTTGTGGGGGCTGCGGCACAGAAATCAAGAATGGCCAGGCCCTGGTAGCCTTGGACAAGCACTG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GCACTTGGGCTGTTTTAAGTGCAAGAGCTGTGGGAAGCTCCTGAATGCCGAGTACATCAGCAAGGATGGGCTGC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CCTACTGCGAAGCTGACTATCACGCCAAGTTCGGCATCCGCTGTGACAGCTGTGAGAAATACATCACGGGGCGC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GTGCTGGAGGCCGGAGAGAAGCACTACCACCCTTCCTGCGCGCTATGTGTCAGGTGCGGCCAGATGTTTGCAGA 740
|||||..||||
Sbjct 1 ---------------------------------------------------------------ATGTTCTCAGA 11
Query 741 AGGCGAAGAGATGTATCTTCAAGGTTCCTCCATCTGGCATCCGGCGTGTCGACAAGCAGCCAGAACTGAAGACA 814
.|||||.||||||||.||.|||||.||||||||||||||||||||.||||||||.||||||||.||||||||||
Sbjct 12 GGGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACA 85
Query 815 GAAACAAGGAAACCAGAACTTCCTCAGAGAGCATCATTTCTGTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGC 888
..|.||||||||||||.|||||.||.||||||||..|.||.||.|||||.||||||||.||||||||.||||||
Sbjct 86 AGAGCAAGGAAACCAGGACTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCTCCAGCACGTCAGGGTCCCCGAGC 159
Query 889 CGTGTGATTTATGCCAAGCTTGGTGGTGAGATCCTGGACTACAGGGACTTGGCAGCCCTTCCTAAAAGTAAGGC 962
||||||||.||.||.||||||||.|.|||||||||||||||||||||||||||.||.|||||.||||..||.||
Sbjct 160 CGTGTGATCTACGCAAAGCTTGGCGATGAGATCCTGGACTACAGGGACTTGGCTGCTCTTCCCAAAAACAAAGC 233
Query 963 CATCTATGACATCGACCGCCCCGACATGATCTCCTACTCACCCTACATCAGCCACTCTGC---AGGGGACAGGC 1033
.|||||..||||||||||||||||||||||||||||.||.||||||||.||||||||.|| .||||||||||
Sbjct 234 GATCTACAACATCGACCGCCCCGACATGATCTCCTATTCGCCCTACATTAGCCACTCGGCCGTGGGGGACAGGC 307
Query 1034 AGAGCTACGGC---------------------------------GAGGGGGATCAGGATGACCGGTCCTACAAG 1074
|||||||.||| |||||||||||||||||.||||||||||||
Sbjct 308 AGAGCTATGGCGAGTCACCTCAGTTGCTCTCACCAACGCCGACTGAGGGGGATCAGGATGATCGGTCCTACAAG 381
Query 1075 CAGTGCCGGACCTCCAGCCCAAGCTCCACTGGGTCGGTTAGCCTCGGGCGCTACACTCCGACCTCACGGTCACC 1148
||||||.|||||||||||||.|||||..|.||.||.||.||||||||.|.||||||.||.||||||||||||||
Sbjct 382 CAGTGCAGGACCTCCAGCCCCAGCTCTGCCGGCTCAGTCAGCCTCGGACACTACACCCCAACCTCACGGTCACC 455
Query 1149 ACAGCACTACAGCCGTC--------------------------------------------------------- 1165
.|||||||||||.||||
Sbjct 456 CCAGCACTACAGTCGTCCAGCTGGTACTGTGAGTGTTGGTACCAGTAGCTGTCTGTCCCTGTCCCAACACCCAA 529
Query 1166 -------------------------------------------------------------------------- 1165
Sbjct 530 GCCCTACATCCGTGTTCAGACATCATTACATCCCCTACTTCCGAGGCAGCGAAAGTGGCCGTAGCACCCCGAGT 603
Query 1166 -------------------------------------------------------------------------- 1165
Sbjct 604 CTCTCAGTGCACTCCGACAGCAGACCTCCTTCCTCTACCTACCAGCAGGCTCCGAGACACTTCCACGTCCCAGA 677
Query 1166 -------------------------------------------------------------------------- 1165
Sbjct 678 CACTGGCGTAAAAGATAACATCTATAGGAAACCCCCTATCTACAAACAGCACGGTCCTGTAGCCCAGTCCCCAA 751
Query 1166 -------------------------------------------------------------------------- 1165
Sbjct 752 TGTCCAAGCTCTCTGGCCTGGTGTCAGTTTTGTCCTTGGTGGTGCAGGAGGCAGGGCGCTCCAAGAGATGGGCA 825
Query 1166 ----------------------CAGCTGCCAGGCGATCGGATGGGGAGGATGGAAGCTTGGACCAGGATAACAG 1217
|||||||||||||||.|||.|.||||||..|.|||||.||||||||.|.|||
Sbjct 826 GGGCTGAGCCCACCGCAGGCTGCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTTGACCAGGACAGCAG 899
Query 1218 GAAGCAGAAGAGCAGCTGGCTGATGCTCAAGGGGGATGCAGACACAAGGACCAATTCTCCAGACCTGGACACCC 1291
|| ||||||..|.|||||||.|.||||||||||||||||||||.||.||.||.||||||||||||||||..|
Sbjct 900 GA---AGAAGACAACCTGGCTGCTTCTCAAGGGGGATGCAGACACCAGAACTAACTCTCCAGACCTGGACAGTC 970
Query 1292 AGTCCTTGTCCCACAGCAGCGGGACCGA-CAGAGACCCTCTCCAAAGGATGGCAGGGGACAGCTTTCACTCAC- 1363
||||..||||||.||||||||||||.|| ||| ||.|||||||||||.|||||||||||||||.|..||||||
Sbjct 971 AGTCGCTGTCCCTCAGCAGCGGGACTGACCAG-GAACCTCTCCAAAGAATGGCAGGGGACAGCCTCTACTCACG 1043
Query 1364 -------------------------------------------------------------------------- 1363
Sbjct 1044 CTTTCCTTATTCCAAACCTGACACTCTTCCAGGACCCAGGAAGGATGGCCTGGACCTCCGGAATGCCAACCTGG 1117
Query 1364 ------------------------------------------AATACAAGATCTATCCGTATGACTCCCTCATC 1395
|.||.|||||.|||||.|||||.|||||||||
Sbjct 1118 CCCCTTGTGGAGCAGACCCGGATGCCAGCTGGGGCACGCGAGAGTATAAGATATATCCCTATGATTCCCTCATC 1191
Query 1396 GTCACAAACCGAATTCGCGTGAAACTGCCCAAAGACGTGGACCGGACGAGACTGGAGAGACACTTGTCGCCCGA 1469
||.||||||||||||||.|||||||||||||||||||||||||||||..|.||||||||||||.|.||.||.||
Sbjct 1192 GTAACAAACCGAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGACACGGCTGGAGAGACACCTATCACCTGA 1265
Query 1470 GGAGTTCCAGGAAGTGTTTGGGATGAGCATCGAGGAGTTTGACCGCCTGGCCCTCTGGAAGAGGAATGACCTTA 1543
|||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.|
Sbjct 1266 GGAGTTCCAAGAAGTGTTTGGGATGAGCATCGAGGAGTTTGACCGCCTGGCCCTGTGGAAGAGGAATGACCTCA 1339
Query 1544 AGAAGAAAGCCCTTTTGTTC 1563
|||||||||||.|..|||||
Sbjct 1340 AGAAGAAAGCCTTGCTGTTC 1359
