Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09288
- Subject:
- XM_011531408.3
- Aligned Length:
- 1815
- Identities:
- 976
- Gaps:
- 828
Alignment
Query 1 ATGGCACTTCCTGCGTGTGCAGTCCGGGAGTTCGAGCCGCCGCGGCAACCGGAGCGAGGAGCGCCCGTCCGCAC 74
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCACTGCCTGCGTGTGCAGTCCGGGAGTTCGAGCCGCCGCGGCAACCGGAGCGAGGAGCGCCCGTCCGCAC 74
Query 75 CACCTGTCCCCGCCGGCATTCCAGAGTAGAGGCCGAATTGGCAGCGAGCCGGCCCGGGTCGGTCGCCGCCTCAG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CACCTGTCCCCGCCGGCATTCCAGAGTAGAGGCCGAATTGGCAGCGAGCCGGCCCGGGTCGGTCGCCGCCTCAG 148
Query 149 TTCGCGCGGGCCCTCCTAGGGGTGTGTCTCACGGATTCCACACCCGGCCGCTCCTGGACAAGCCCCGAAAGGCG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTCGCGCGGGCCCTCCTAGGGGTGTGTCTCACGGATTCCACACCCGGCCGCTCCTGGACAAGCCCCGAAAGGCG 222
Query 223 TCTTCTTCCCTGGCGGGAGCCGCGTGCGCCCCGCTTTTCGCGCTGCTGTCCCGGGGCCGCCGCAGGCGGATGCA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCTTCTTCCCTGGCGGGAGCCGCGTGCGCCCCGCTTTTCGCGCTGCTGTCCCGGGGCCGCCGCAGGCGGATGCA 296
Query 297 CGTCCTCAGGCGACGCTGGGACCTGGGCTCCCTCTGCCGGGCCCTGCTCACTCGGGGCCTGGCCGCCCTGGGCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGTCCTCAGGCGACGCTGGGACCTGGGCTCCCTCTGCCGGGCCCTGCTCACTCGGGGCCTGGCCGCCCTGGGCC 370
Query 371 ACTCGCTGAAGCACGTGCTCGGTGCGATCTTCTCCAAGATTTTCGGCCCCATGGCCAGCGTCGGGAACATGGAT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACTCGCTGAAGCACGTGCTCGGTGCGATCTTCTCCAAGATTTTCGGCCCCATGGCCAGCGTCGGGAACATGGAT 444
Query 445 GAGAAATCCAACAAGCTGCTGCTAGCTTTGGTGATGCTCTTCCTATTTGCCGTGATCGTCCTCCAATACGTGTG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGAAATCCAACAAGCTGCTGCTAGCTTTGGTGATGCTCTTCCTATTTGCCGTGATCGTCCTCCAATACGTGTG 518
Query 519 CCCCGGCACAGAATGCCAGCTCCTCCGCCTGCAGGCGTTCAGCTCCCCGGTGCCGGACCCGTACCGCTCGGAGG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCCCGGCACAGAATGCCAGCTCCTCCGCCTGCAGGCGTTCAGCTCCCCGGTGCCGGACCCGTACCGCTCGGAGG 592
Query 593 ATGAGAGCTCCGCCAGGTTCGTGCCCCGCTACAATTTCACCCGCGGCGACCTCCTGCGCAAGGTAGACTTCGAC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGAGAGCTCCGCCAGGTTCGTGCCCCGCTACAATTTCACCCGCGGCGACCTCCTGCGCAAGGTAGACTTCGAC 666
Query 667 ATCAAGGGCGATGACCTGATCGTGTTCCTGCACATCCAGAAGACCGGGGGCACCACTTTCGGCCGCCACTTGGT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATCAAGGGCGATGACCTGATCGTGTTCCTGCACATCCAGAAGACCGGGGGCACCACTTTCGGCCGCCACTTGGT 740
Query 741 GCGTAACATCCAGCTGGAGCAGCCGTGCGAGTGCCGCGTGGGTCAGAAGAAATGCACTTGCCACCGGCCGGGTA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCGTAACATCCAGCTGGAGCAGCCGTGCGAGTGCCGCGTGGGTCAGAAGAAATGCACTTGCCACCGGCCGGGTA 814
Query 815 AGCGGGAAACCTGGCTCTTCTCCAGGTTCTCCACGGGCTGGAGCTGCGGGTTGCACGCCGACTGGACCGAGCTC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCGGGAAACCTGGCTCTTCTCCAGGTTCTCCACGGGCTGGAGCTGCGGGTTGCACGCCGACTGGACCGAGCTC 888
Query 889 ACCAGCTGTGTGCCCTCCGTGGTGGACGGCAAGCGCGACGCCAGGCTGAGACCGTCCAGGAACTTCCACTACAT 962
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||..|
Sbjct 889 ACCAGCTGTGTGCCCTCCGTGGTGGACGGCAAGCGCGACGCCAGGCTGAGACCGTCCAGAAAGGT--------- 953
Query 963 CACCATCCTCCGAGACCCAGTGTCCCGGTACTTGAGTGAGTGGAGGCATGTCCAGAGAGGGGCAACATGGAAAG 1036
||| ||||||||..|| ||.|||| .|.||.|
Sbjct 954 -----------GAG-----------CGGTACTTCTGT-----------TGCCCAG-----------TTTGATA- 982
Query 1037 CATCCCTGCATGTCTGCGATGGAAGGCCTCCAACCTCCGAAGAGCTGCCCAGCTGCTACACTGGCGATGACTGG 1110
|||.|
Sbjct 983 ---CCCAG------------------------------------------------------------------ 987
Query 1111 TCTGGCTGCCCCCTCAAAGAGTTTATGGACTGTCCCTACAATCTAGCCAACAACCGCCAGGTGCGCATGCTCTC 1184
Sbjct 988 -------------------------------------------------------------------------- 987
Query 1185 CGACCTGACCCTGGTAGGCTGCTACAACCTCTCTGTCATGCCTGAAAAGCAAAGAAACAAGGTCCTTCTGGAAA 1258
Sbjct 988 -------------------------------------------------------------------------- 987
Query 1259 GTGCCAAGTCAAATCTGAAGCACATGGCGTTCTTCGGCCTCACTGAGTTTCAGCGGAAGACCCAATATCTGTTT 1332
Sbjct 988 -------------------------------------------------------------------------- 987
Query 1333 GAGAAAACCTTCAACATGAACTTTATTTCGCCATTTACCCAGTATAATACCACTAGGGCCTCTAGTGTAGAGAT 1406
Sbjct 988 -------------------------------------------------------------------------- 987
Query 1407 CAATGAGGAAATTCAAAAGCGTATTGAGGGACTGAATTTTCTGGATATGGAGTTGTACAGCTATGCCAAAGACC 1480
Sbjct 988 -------------------------------------------------------------------------- 987
Query 1481 TTTTTTTGCAGAGGTATCAGTTTATGAGGCAGAAAGAGCATCAGGAGGCCAGGCGAAAGCGTCAGGAACAACGC 1554
Sbjct 988 -------------------------------------------------------------------------- 987
Query 1555 AAATTTCTGAAGGGAAGGCTCCTTCAGACCCATTTCCAGAGCCAGGGTCAGGGCCAGAGCCAGAATCCGAATCA 1628
Sbjct 988 -------------------------------------------------------------------------- 987
Query 1629 GAATCAGAGTCAGAACCCAAATCCGAATGCCAATCAGAACCTGACTCAGAATCTGATGCAGAATCTGACTCAGA 1702
Sbjct 988 -------------------------------------------------------------------------- 987
Query 1703 GTTTGAGCCAGAAGGAGAACCGGGAAAGCCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAAT 1776
Sbjct 988 -------------------------------------------------------------------------- 987
Query 1777 GGCACCAACGACTACATAGGCAGTGTAGAGAAATGGCGT 1815
Sbjct 988 --------------------------------------- 987
