Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09416
Subject:
XM_006495535.2
Aligned Length:
1071
Identities:
491
Gaps:
528

Alignment

Query    1  ATGGGAGGAGCTGTGAGTGCTGGGGAAGATAATGATGACTTAATTGATAATTTAAAAGAAGCTCAGTATATTCG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TACTGAAAGAGTGGAGCAAGCCTTCAGAGCGATTGATCGTGGAGATTACTATTTGGAAGGCTACAGAGACAATG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTTACAAAGACTTAGCCTGGAAGCATGGAAACATCCACTTGTCAGCACCTTGCATTTATTCTGAAGTTATGGAA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GCATTGAAACTTCAACCAGGATTGTCTTTTCTTAACCTGGGAAGTGGAACCGGATATTTAAGTACAATGGTGGG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CTTAATTTTAGGTCCTTTTGGAATAAATCATGGGATTGAGCTTCATTCAGATGTGGTGGAATATGCCAAGGAAA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AACTGGAGAGCTTCATCAAAAATAGTGATAGCTTTGATAAATTTGAGTTCTGTGAACCTGCATTTGTTGTTGGT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AATTGCCTCCAGATAGCTTCTGACAGTCATCAGTATGATCGAATTTATTGTGGAGCTGGAGTACAGAAAGACCA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TGAAAACTACATGAAAATATTACTAAAAGTTGGAGGCATATTAGTCATGCCTATAGAGGATCAGTTAACACAGA  592
                      |||||.||.|||||.||||||||.||||||||.|||||||||||||||||||||||.|||||||
Sbjct    1  ----------ATGAAGATCTTACTCAAAGTTGGGGGCATATTGGTCATGCCTATAGAGGATCAGTTGACACAGA  64

Query  593  TTATGCGAACTGGACAGAACACTTGGGAAAGTAAAAATATCCTTGCTGTTTCATTTGCTCCACTTGTGCAACCA  666
            |||||||.||||||||.|||||||||||||||||||||||||||||.|||||.|||||.|||||.||.||.||.
Sbjct   65  TTATGCGGACTGGACAAAACACTTGGGAAAGTAAAAATATCCTTGCGGTTTCCTTTGCACCACTAGTACAGCCT  138

Query  667  AGTAAGAATGATAATGGCAAACCAGATTCTGTGGGACTCCCTCCCTGTGCTGTCAGGAATCTACAGGACTTGGC  740
            |||||||||||||||||||.|||.||.||||||||.||||||||.|||||||||||||||||.||.||||||||
Sbjct  139  AGTAAGAATGATAATGGCACACCGGACTCTGTGGGGCTCCCTCCATGTGCTGTCAGGAATCTCCAAGACTTGGC  212

Query  741  TCGTATTTACATTCGACGCACACTTAGAAATTTCATAAATGATGAGATGCAGGCCAAGGGGATTCCTCAAAGGG  814
            |||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||.|||||||
Sbjct  213  TCGCATTTACATTCGACGTACACTTAGAAACTTCATAAATGATGAGATGCAGGCCAAGGGGATTCCACAAAGGG  286

Query  815  CTCCACCCAAAAGGAAAAGAAAGAGAGTTAAACAGAGAATTAACACTTACGTATTTGTGGGTAATCAGCTTATT  888
            ||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.
Sbjct  287  CTCCACCCAAGAGGAAAAGAAAGAGAGTTAAACAGAGAATTAATACTTACGTATTTGTGGGTAATCAGCTTATC  360

Query  889  CCTCAGCCTCTAGACAGTGAAGAGGATGAAAAAATGGAAGAGGATATCAAAGAAGAGGAGGAAAAAGATCACAA  962
            |||||||||||||||||||||||||||||||||||||||||.||.|.|||||||||.|||||.|||||.||||.
Sbjct  361  CCTCAGCCTCTAGACAGTGAAGAGGATGAAAAAATGGAAGAAGACAGCAAAGAAGAAGAGGAGAAAGAGCACAT  434

Query  963  TGAAGCAATGAAGCCAGAGGAGCCACCTCAAAATTTACTGAGAGAAAAAATCATGAAGCTGCCCCTCCCTGAAT  1036
            .|||||.|||||||..|||||.||||||||.||..|||||||.|||||.||.|||||||||||.|||||.||.|
Sbjct  435  CGAAGCCATGAAGCGCGAGGAACCACCTCAGAACCTACTGAGGGAAAAGATAATGAAGCTGCCACTCCCAGAGT  508

Query 1037  CTTTAAAAGCTTACTTGACATATTTTAGAGACAAA  1071
            |||||||.||||||||||||||||||.||||||||
Sbjct  509  CTTTAAAGGCTTACTTGACATATTTTCGAGACAAA  543