Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09742
Subject:
NM_001370553.1
Aligned Length:
1428
Identities:
1155
Gaps:
267

Alignment

Query    1  ATGCCAGCTCCCCAGCGGAAGCACAGGCGTGGAGGCTTCTCTCACAGATGTTTCCCCACCCCGCAGACGGCGAT  74
                                                                                    ||
Sbjct    1  ------------------------------------------------------------------------AT  2

Query   75  GACCCCCCAGCCCGCCGGACCCCCGGATGGGGGCTGGGGCTGGGTGGTGGCGGCCGCAGCCTTCGCGATAAACG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    3  GACCCCCCAGCCCGCCGGACCCCCGGATGGGGGCTGGGGCTGGGTGGTGGCGGCCGCAGCCTTCGCGATAAACG  76

Query  149  GGCTGTCCTACGGGCTGCTGCGCTCGCTGGGCCTTGCCTTCCCTGACCTTGCCGAGCACTTTGACCGAAGCGCC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   77  GGCTGTCCTACGGGCTGCTGCGCTCGCTGGGCCTTGCCTTCCCTGACCTTGCCGAGCACTTTGACCGAAGCGCC  150

Query  223  CAGGACACTGCGTGGATCAGCGCCCTGGCCCTGGCCGTGCAGCAGGCAGCCAGCCCTGTGGGCAGCGCCCTGAG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  151  CAGGACACTGCGTGGATCAGCGCCCTGGCCCTGGCCGTGCAGCAGGCAGCCAGCCCCGTGGGCAGCGCCCTGAG  224

Query  297  CACGCGCTGGGGGGCCCGCCCCGTGGTGATGGTTGGGGGCGTCCTCGCCTCGCTGGGCTTCGTCTTCTCGGCTT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  225  CACGCGCTGGGGGGCCCGCCCCGTGGTGATGGTTGGGGGCGTCCTCGCCTCGCTGGGCTTCGTCTTCTCGGCTT  298

Query  371  TCGCCAGCGATCTGCTGCATCTCTACCTCGGCCTGGGCCTCCTCGCTGGCTTTGGTTGGGCCCTGGTGTTCGCC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  299  TCGCCAGCGATCTGCTGCATCTCTACCTCGGCCTGGGCCTCCTCGCTGGCTTTGGTTGGGCCCTGGTGTTCGCC  372

Query  445  CCCGCCCTAGGCACCCTCTCGCGTTACTTCTCCCGCCGTCGAGTCTTGGCGGTGGGGCTGGCGCTCACCGGCAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  373  CCCGCCCTAGGCACCCTCTCGCGTTACTTCTCCCGCCGTCGAGTCTTGGCGGTGGGGCTGGCGCTCACCGGCAA  446

Query  519  CGGGGCCTCCTCGCTGCTCCTGGCGCCCGCCTTGCAGCTTCTTCTCGATACTTTCGGCTGGCGGGGCGCTCTGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  447  CGGGGCCTCCTCGCTGCTCCTGGCGCCCGCCTTGCAGCTTCTTCTCGATACTTTCGGCTGGCGGGGCGCTCTGC  520

Query  593  TCCTCCTCGGCGCGATCACCCTCCACCTCACCCCCTGTGGCGCCCTGCTGCTACCCCTGGTCCTTCCTGGAGAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  521  TCCTCCTCGGCGCGATCACCCTCCACCTCACCCCCTGTGGCGCCCTGCTGCTACCCCTGGTCCTTCCTGGAGAC  594

Query  667  CCCCCAGCCCCACCGCGTAGTCCCCTAGCTGCCCTCGGCCTGAGTCTGTTCACACGCCGGGCCTTCTCAATCTT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  595  CCCCCAGCCCCACCGCGTAGTCCCCTAGCTGCCCTCGGCCTGAGTCTGTTCACACGCCGGGCCTTCTCAATCTT  668

Query  741  TGCTCTAGGCACAGCCCTGGTTGGGGGCGGGTACTTCGTTCCTTACGTGCACTTGGCTCCCCACGCTTTAGACC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  669  TGCTCTAGGCACAGCCCTGGTTGGGGGCGGGTACTTCGTTCCTTACGTGCACTTGGCTCCCCACGCTTTAGACC  742

Query  815  GGGGCCTGGGGGGATACGGAGCAGCGCTGGTGGTGGCCGTGGCTGCGATGGGGGATGCGGGCGCCCGGCTGGTC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  743  GGGGCCTGGGGGGATACGGAGCAGCGCTGGTGGTGGCCGTGGCTGCGATGGGGGATGCGGGCGCCCGGCTGGTC  816

Query  889  TGCGGGTGGCTGGCAGACCAAGGCTGGGTGCCCCTCCCGCGGCTGCTGGCCGTATTCGGGGCTCTGACTGGGCT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  817  TGCGGGTGGCTGGCAGACCAAGGCTGGGTGCCCCTCCCGCGGCTGCTGGCCGTATTCGGGGCTCTGACTGGGCT  890

Query  963  GGGGCTGTGGGTGGTGGGGCTGGTGCCCGTGGTGGGCGGCGAAGAGAGCTGGGGGGGTCCCCTGCTGGCCGCGG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  891  GGGGCTGTGGGTGGTGGGGCTGGTGCCCGTGGTGGGCGGCGAAGAGAGCTGGGGGGGTCCCCTGCTGGCCGCGG  964

Query 1037  CTGTGGCCTATGGGCTGAGCGCGGGGAGTTACGCCCCGCTGGTTTTCGGTGTACTCCCCGGGCTGGTGGGCGTC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  965  CTGTGGCCTATGGGCTGAGCGCGGGGAGTTACGCCCCGCTGGTTTTCGGTGTACTCCCCGGGCTGGTGGGCGTC  1038

Query 1111  GGAGGTGTGGTGCAGGCCACAGGGCTGGTGATGATGCTGATGAGCCTCGGGGGGCTCCTGGGCCCTCCCCTGTC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1039  GGAGGTGTGGTGCAGGCCACAGGGCTGGTGATGATGCTGATGAGCCTCGGGGGGCTCCTGGGCCCTCCCCTGTC  1112

Query 1185  AGGCTTCCTAAGGGA--TGAG---ACAGGAGACTTCA-CCGCCT----CTTTCCT-----CCTGTCTGGTTCTT  1243
            |||     ||| |||  ||||   ||||        | |.||||    ||.||||     ||||  .|||||  
Sbjct 1113  AGG-----TAA-GGACCTGAGCTCACAG--------ATCTGCCTACAACTATCCTCTGCCCCTG--GGGTTC--  1168

Query 1244  TGATCCTCTCCGGCAGCTTCATCTACATAGGGTTGCCCAGGGCGCTGCCCTCCTGTGGTCCAGCCTCCCCTCCA  1317
                        |..|||||                                                      
Sbjct 1169  ------------GAGGCTTC------------------------------------------------------  1176

Query 1318  GCCACGCCTCCCCCAGAGACGGGGGAGCTGCTTCCCGCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGG  1391
                                                                                      
Sbjct 1177  --------------------------------------------------------------------------  1176

Query 1392  CTCCACTCTGGACACCACTTGT  1413
                                  
Sbjct 1177  ----------------------  1176