Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09779
- Subject:
- XM_011517769.2
- Aligned Length:
- 2804
- Identities:
- 1283
- Gaps:
- 1510
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGGAAGATCATGCAGCATGAGTCTCCACCGGACATCGGGAACCCCACAGGGGCCTAGGATGGTCAGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCATCACATTCCTGCCATCCGAGCCCACTCCGGGACTCCTGGCCCCTCGCCCTGTGGCAGCACATCGAGTCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTATGGCAAGCCTTGCTAACAACCTCCATCTCAAGATGCCCTCAGGAGGAGGGATGGCTCCTCAGAACAACGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGAGAGCCGCATCCATCTGCCTGCCTTAAGCCCCAGGAGACAAATGCTCACCAATGGGAAGCCGCGATTCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTCACCCAGGCTGGAGGCATGTCAGGGTCACATACTTTAAAGCCAAAGCAGCAGGAGTTTGGAAGCCCTTTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCCAAATCCTGGGAAAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAAT 444
Query 1 ---------------------ATGATGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAGGTCTCTAC 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTAGTGGTCACCAGCAGTCCCATGATGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAGGTCTCTAC 518
Query 54 AGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCTGAATATACCTCCTTCAGATA 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCTGAATATACCTCCTTCAGATA 592
Query 128 CCAGGTCCCTTATTTCGCGTGAGTCTTTGGCGTCCACGACCTTGAGTCTGACGGAAAGTCAGTCGGCCTCAAGC 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCAGGTCCCTTATTTCGCGTGAGTCTTTGGCGTCCACGACCTTGAGTCTGACGGAAAGTCAGTCGGCCTCAAGC 666
Query 202 ATGAAGCAGGAGTGGTCCCAGGGCTACAGGGCCCTCCCTTCGCTCTCCAACCACGGCTCTCAGAATGGCCTTGA 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATGAAGCAGGAGTGGTCCCAGGGCTACAGGGCCCTCCCTTCGCTCTCCAACCACGGCTCTCAGAATGGCCTTGA 740
Query 276 TCTAGGGGATCTCCTTAGCCTTCCTCCCGGGACATCCATGTCCAGCAATAGTGTCTCTAACTCATTACCATCCT 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTAGGGGATCTCCTTAGCCTTCCTCCCGGGACATCCATGTCCAGCAATAGTGTCTCTAACTCATTACCATCCT 814
Query 350 ACCTTTTTGGCACGGAAAGTAGCCACTCTCCTTACCCTAGTCCTCGGCACTCATCCACCAGGTCCCACTCGGCC 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACCTTTTTGGCACGGAAAGTAGCCACTCTCCTTACCCTAGTCCTCGGCACTCATCCACCAGGTCCCACTCGGCC 888
Query 424 CGCTCCAAGAAGAGAGCGCTGTCCTTGTCCCCGCTGTCCGATGGCATCGGGATAGATTTCAATACCATCATCCG 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGCTCCAAGAAGAGAGCGCTGTCCTTGTCCCCGCTGTCCGATGGCATCGGGATAGATTTCAATACCATCATCCG 962
Query 498 CACGTCGCCCACGTCCTTGGTGGCCTACATCAACGGGTCGAGGGCTTCGCCGGCCAACCTGTCCCCGCAGCCGG 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CACGTCGCCCACGTCCTTGGTGGCCTACATCAACGGGTCGAGGGCTTCGCCGGCCAACCTGTCCCCGCAGCCGG 1036
Query 572 AGGTCTACGGGCATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCCCGGTGCCCGGCAGCCAGAAG 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGGTCTACGGGCATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCCCGGTGCCCGGCAGCCAGAAG 1110
Query 646 GGCGTGCTGGTGGCCCCTGGAGGCCTGGCGCTGCCGGCCTACGGCGAGGACGGGGCCCTGGAGCACGAGCGCAT 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGCGTGCTGGTGGCCCCTGGAGGCCTGGCGCTGCCGGCCTACGGCGAGGACGGGGCCCTGGAGCACGAGCGCAT 1184
Query 720 GCAACAGCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCC 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCAACAGCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCC 1258
Query 794 CCGACAGCCAGCCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGGCAGCACCGTAGACCTACCC 867
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCGACAGCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGGCAGCACCGTAGACCTACCC 1332
Query 868 CCCGCGCCTCCGCTCCCTCCTCTGCCGCCGCCCCAAGGCCCCCCACCCCCTTACCATGCCCATGCGCACCTTCA 941
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCGCGCCTCCGCTCCCTCCTCTGCCGCCGCCCCCAGGCCCCCCACCCCCTTACCATGCCCATGCGCACCTTCA 1406
Query 942 CCACCCGGAGCTCGGGCCCCACGCCCAGCAGCTGGCCTTGCCCCAGGCCACCCTGGACGACGACGGGGAGATGG 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCACCCGGAGCTCGGGCCCCACGCCCAGCAGCTGGCCTTGCCCCAGGCCACCCTGGACGACGACGGGGAGATGG 1480
Query 1016 ACGGCATCGGGGGCAAGCATTGCTACCGCTGGATCGACTGCAGCGCCCTGTACGACCAGCAGGAGGAGCTCGTG 1089
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACGGCATCGGGGGCAAGCATTGCTGCCGCTGGATCGACTGCAGCGCCCTGTACGACCAGCAGGAGGAGCTCGTG 1554
Query 1090 CGGCACATCGAGAAGGTCCACATCGACCAGCGCAAAGGGGAGGACTTCACTTGCTTCTGGGCCGGTTGCCCTCG 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CGGCACATCGAGAAGGTCCACATCGACCAGCGCAAAGGGGAGGACTTCACTTGCTTCTGGGCCGGTTGCCCTCG 1628
Query 1164 AAGATACAAGCCCTTCAACGCCCGCTATAAACTGCTGATCCACATGAGAGTCCACTCTGGGGAGAAGCCCAACA 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAGATACAAGCCCTTCAACGCCCGCTATAAACTGCTGATCCACATGAGAGTCCACTCTGGGGAGAAGCCCAACA 1702
Query 1238 AGTGTACG-----TTTGAAGGTTGCGAGAAGGCCTTTTCAAG-GCTTGAA-------AATCTCAAG-ATCCACT 1297
|||||||| ||| |||||.|| ||||||.| ||||.|| |.|...||| |||||
Sbjct 1703 AGTGTACGGTATTTTT---GGTTGAGA-------TTTTCACGTGCTTAAAGCCATTGATTGGGAAGCATCCA-- 1764
Query 1298 TGCGGAGCCACACAGGCGAGAAGCCGTATTTGTGCCAGCATCCGGGTTGTCAGAAGGCCTTCAGTAACTCCAGT 1371
|||| |||.|
Sbjct 1765 --CGGA---ACAGA------------------------------------------------------------ 1773
Query 1372 GACCGCGCCAAACACCAGCGGACGCATCTGGACACCAAACCTTATGCTTGTCAAATTCCAGGATGTACCAAACG 1445
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 1446 CTACACAGACCCAAGTTCCCTAAGAAAGCATGTGAAGGCACATTCTTCCAAAGAGCAACAAGCAAGGAAAAAGT 1519
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 1520 TGCGGTCCAGCACAGAGCTCCATCCAGACCTGCTCACAGATTGCCTCACCGTGCAGTCCCTGCAGCCGGCCACT 1593
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 1594 TCCCCTAGAGATGCTGCTGCTGAAGGGACCGTGGGACGCTCCCCTGGACCCGGGCCTGACCTCTATTCAGCTCC 1667
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 1668 CATTTTCTCCAGCAATTATTCAAGCCGAAGTGGAACAGCTGCTGGGGCCGTACCACCCCCACATCCTGTCAGTC 1741
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 1742 ACCCTTCTCCAGGACATAATGTACAGGGGAGCCCTCACAACCCCTCCTCCCAGTTACCTCCACTCACAGCTGTG 1815
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 1816 GACGCAGGAGCTGAGAGGTTTGCACCTTCTGCTCCATCTCCTCACCACATCAGCCCCCGGAGAGTTCCAGCTCC 1889
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 1890 TTCTTCAATACTGCAAAGAACACAGCCTCCCTATACCCAGCAGCCATCAGGTTCACACCTGAAGTCCTATCAGC 1963
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 1964 CAGAAACAAACTCTTCTTTTCAACCAAATGGTATCCATGTCCATGGATTTTATGGGCAGCTGCAGAAGTTCTGT 2037
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 2038 CCCCCACACTACCCCGATTCCCAGAGAATTGTGCCGCCTGTCAGCTCCTGCAGTGTGGTGCCTTCGTTTGAGGA 2111
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 2112 CTGCCTAGTCCCTACATCCATGGGCCAGGCCAGTTTTGATGTTTTCCACAGAGCCTTCTCGACTCACTCGGGCA 2185
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 2186 TTACAGTGTATGATTTACCTTCAAGTTCCTCGAGCCTCTTTGGGGAGTCTCTCCGCAGCGGGGCTGAAGATGCT 2259
Sbjct 1774 -------------------------------------------------------------------------- 1773
Query 2260 ACCTTCTTGCAGATCAGCACCGTGGACCGCTGTCCTAGCCAGCTCTCCTCTGTCTGCACCGAAGGC 2325
Sbjct 1774 ------------------------------------------------------------------ 1773
