Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09794
- Subject:
- XR_001751865.1
- Aligned Length:
- 2942
- Identities:
- 1533
- Gaps:
- 1382
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGCTGTTGGGCGCCGGAACTGGTCCGGCCCGACTCACGACCCCGCGGGACCCGGCCGGAACCCGGCCCGACCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCGCGCGCGCGGCGGAGGACGAGGAAGAGTTGTGGCGAGGCAGATCCTGCCCCGTGGCCGCGGCCGTCTCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGTGTCCCACCGGCCTTCCGGGTTCCAGCGCCAGGCCTGGTGCCTGCCCCAGGAGGATGAGCATTTGCATTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGCACCTTATCGTGCCCTTCCACCTGCTGAAGCAGCTGTGCCTGCCGCTCTTGTGAACTGCGAACTTCCCCTT 296
Query 1 -----------------------------------------------ATGCCGCCCCATGTGGTGCTCACCTTC 27
||||.||||||||||||||||||||||
Sbjct 297 ACCTCCTCTCTCTGGCTCGGGAGCTGGCTCGGCCGCCTGTCAGTGCAATGCTGCCCCATGTGGTGCTCACCTTC 370
Query 28 CGGCGCCTGGGCTGCGCCTTGGCCTCCTGCCGGCTGGCGCCTGCGAGACACAGAGGAAGTGGTCTTCTGCACAC 101
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CGGCGCCTGGGCTGCGCCTTGGCGTCCTGCCGGCTGGCGCCTGCGAGACACAGAGGAAGTGGTCTTCTGCACAC 444
Query 102 AGCCCCAGTGGCCCGCTCGGACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCTTTGGGGACAGAATCGCCC 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGCCCCAGTGGCCCGCTCGGACAGGAGCGCCCCGGTGTTCACCCGTGCCCTGGCCTTTGGGGACAGAATCGCCC 518
Query 176 TGGTTGACCAGCACGGCCGCCACACGTACAGGGAGCTTTATTCCCGCAGCCTTCGCCTGTCCCAGGAGATCTGC 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGTTGACCAGCACGGCCGCCACACGTACAGGGAGCTTTATTCCCGCAGCCTTCGCCTGTCCCAGGAGATCTGC 592
Query 250 AGGCTCTGCGGGTGTGTCGGCGGGGACCTCCGGGAGGAGAGGGTCTCCTTCCTATGTGCTAACGACGCCTCCTA 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||
Sbjct 593 AGGCTCTGCGGGTGTGTCGGCGGGGACCTCCGGGAGGAGAGGGTCTCCTTCCTATGCGCTAACGATGCCTCCTA 666
Query 324 CGTCGTGGCCCAGTGGGCCTCATGGATGAGCGGCGGTGTGGCAGTACCCCTCTACAGGAAGCATCCCGCGGCCC 397
||||||||||||||||||.|||||||||||.||||||||||||||.||||||||||||||||||||||||||||
Sbjct 667 CGTCGTGGCCCAGTGGGCGTCATGGATGAGTGGCGGTGTGGCAGTCCCCCTCTACAGGAAGCATCCCGCGGCCC 740
Query 398 AGCTGGAGTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCTTGTCAGCCAGGAGTACCTGGAGCTCCTGAGC 471
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 741 AGCTGGAGTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCTTGCCAGCCAGGAGTACCTGGAGCTCCTGAGC 814
Query 472 CCGGTGGTCAGGAAGCTGGGGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACACTGGAGCAGTAGAGGAACC 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCGGTGGTCAGGAAGCTGGGGGTCCCGCTGCTGCCGCTCACACCAGCCATCTACACTGGAGCAGTAGAGGAACC 888
Query 546 GGCAGAGGTCCCGGTCCCAGAGCAGGGATGGAGGAACAAGGGCGCCATGATCATCTACACCAGTGGGACCACGG 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGCAGAGGTCCCGGTCCCAGAGCAGGGATGGAGGAACAAGGGCGCCATGATCATCTACACCAGTGGGACCACGG 962
Query 620 GGAGGCCCAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGTGGTGACCGGGCTGGTCCACAAGTGGGCA 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGAGGCCCAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGTGGTGACCGGGCTGGTCCACAAGTGGGCA 1036
Query 694 TGGACCAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGCGCTGCTCTG 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGGACCAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGCGCTGCTCTG 1110
Query 768 TCCTCTCTGGGTGGGAGCCACCTGTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAAGTTCTTAA 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCCTCTCTGGGTGGGAGCCACCTGTGTGATGATGCCTGAGTTCAGCCCTCAGCAGGTTTGGGAAAAGTTCTTAA 1184
Query 842 GTTCTGAAACGCCGCGGATCAATGTCTTTATGGCAGTGCCTACAATATACACCAAGCTGATGGAGTACTACGAC 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTTCTGAAACGCCGCGGATCAATGTCTTTATGGCAGTGCCTACAATATACACCAAGCTGATGGAGTACTACGAC 1258
Query 916 AGGCATTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGCAGTTTGTGAAGAAAAAATTAGGCTGATGGTCTC 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGGCATTTTACCCAGCCGCACGCCCAGGATTTCTTGCGTGCAGTTTGTGAAGAAAAAATT-------------- 1318
Query 990 AGGCTCAGCTGCCCTGCCCCTCCCAGTGCTGGAGAAGTGGAAGAACATCACGGGCCACACCCTGCTGGAGCGGT 1063
Sbjct 1319 -------------------------------------------------------------------------- 1318
Query 1064 ATGGCATGACCGAGATCGGCATGGCTCTGTCCGGGCCCCTGACCACTGCCATGCGCCTGCCAGGTTCCGTGGGG 1137
|||||||||||||
Sbjct 1319 -------------------------------------------------------------AGGTTCCGTGGGG 1331
Query 1138 ACCCCACTGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGGGAAGCCTGCTCCTACACCATCCA 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 ACCCCACTGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGGGAAGCCTGCTCCTACACCATCCA 1405
Query 1212 CGCAGAGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGTTTGAAGAAAAGGAGGGGGAGCTGCTGGTGAGGG 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 CGCAGAGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGTTTGAAGAAAAGGAGGGGGAGCTGCTGGTGAGGG 1479
Query 1286 GACCCTCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGCTGGTTT 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 GACCCTCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGCTGGTTT 1553
Query 1360 AAGACAGGGGACACCGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAA 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 AAGACAGGGGACACCGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAA 1627
Query 1434 GACTGGAGGCTACAAGGTCAGCGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGG 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 GACTGGAGGCTACAAGGTCAGCGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGG 1701
Query 1508 CTGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCA 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 CTGTGATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCA 1775
Query 1582 CTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAAA-------------TGTCCTGGCC---------------- 1626
|||||||||||||||||||||||||||||||||.| ||| |||||
Sbjct 1776 CTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGAGACGGGGTTTCACCGTGT--TGGCCAAGCTGGTCTCGAACT 1847
Query 1627 CC---------GTA-----CGCGGTGCCCTCGG--------AG--CTG-----------GTG-----CTGGTGG 1660
|| ||| |.|| |||||| || ||| ||| |||||
Sbjct 1848 CCTGACTTCAAGTAATCCTCCCG----CCTCGGCCTCCCGAAGTCCTGGAATTACAAGCGTGAGCCACTGGT-- 1915
Query 1661 AGGAGATCCCGCGGAACCAGATGGGCAAGATTG-ACAAGAAGGCGC---TCAT-----------CAG-----GC 1714
|..|| ||||.||...| |||.|| |.|||||.|..| |||| ||| ||
Sbjct 1916 ---AATTC-------ACCATATTTAC-AGAATGAAGAAGAAAGATCATATCATTTCAATAGATACAGAAAAAGC 1978
Query 1715 ACTTCCACCCCTCA------------------------------------------------------------ 1728
|.||.||....|||
Sbjct 1979 ATTTGCAAATGTCAAAACCCTTTTATAACAAGCACTCTTAGCAAACTAGGAGAAGAAGGAAAATCCTTGAACCT 2052
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2053 GATGAGGGAGTCTCTCAAAAGCTACCAGATGACATCCTGCTCGATGGGGAGCTGCTGGGCGTTTTCCTCCTGTG 2126
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2127 ACCAGGAAGGGGCGCCTGCCCTCACCACTGCCACCCAGTCTCATTCAACACAGAGTTTGTCCCCTGTTAGAAAC 2200
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2201 CGAGACGTTGGTTACACGTGGAGGTTGGGAGTGGCTCAGGCAGGCAGAGGGGCTTCTGGGAACCTGGCCATGTT 2274
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2275 CCCTTTCAGTCTGGGCGCTACTTAGAGCAGGGGGCAGTTGCTTCAATAAAACTTTAGATTCCCACACAGGCCAG 2348
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2349 GCGTGGTGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGACGTCAGGAGTTGG 2422
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2423 AGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTATTAAAAATACAAAAATTAGCCAGGCATGGTGGTATGC 2496
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2497 GCCTGTAGTCCCAGCTAGTTAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCGGCAAG 2570
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2571 CCGAGACTGCACCACTGCAATCCAGCCTGGGCGACAGGGCAAGCCTCTGTCTCAAAAGAAAAAAAAATCTACAC 2644
Query 1729 -------------------------------------------------------------------------- 1728
Sbjct 2645 ATCCCTCACCACACTGTACATAGGACAGCTGGGTGTAAATTACATCTCCATTTAAATGCCTGTCATAGTTTTAT 2718
Query 1729 -------------------------------------------------------- 1728
Sbjct 2719 ACAACTATAAAATATATACGTGCCAAAATAAATTTGATAGGAACATTGGAACCAGG 2774
