Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09828
- Subject:
- XR_001755663.1
- Aligned Length:
- 2614
- Identities:
- 1022
- Gaps:
- 1591
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGCCCGCCACCTCCGCCCGTGGCCGGAGAGCCCCAGGCCCGAGCCACGCGGTCTTCCGGGCCCGGGTCGGGG 74
Query 1 ----ATGGCTACGTGGAGGCGGGACGGCCGACTGACAGGCGGCCAAAGGCTGCTGTGCGCTGGGCTGGCGGGGA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCGATGGCTACGTGGAGGCGGGACGGCCGACTGACAGGCGGCCAAAGGCTGCTGTGCGCTGGGCTGGCGGGGA 148
Query 71 CGCTCAGCCTCAGCCTCACCGCGCCCCTGGAGCTCGCCACCGTGCTGGCCCAGGTTGGCGTCGTGCGAGGCCAC 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGCTCAGCCTCAGCCTCACCGCGCCCCTGGAGCTCGCCACCGTGCTGGCCCAGGTTGGCGTCGTGCGAGGCCAC 222
Query 145 GCCCGGGGACCGTGGGCCACAGGGCACCGGGTGTGGCGGGCAGAGGGGCTCCGGGCCCTGTGGAAGGGGAACGC 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCCCGGGGACCGTGGGCCACAGGGCACCGGGTGTGGCGGGCAGAGGGGCTCCGGGCCCTGTGGAAGGGGAACGC 296
Query 219 GGTGGCGTGCCTGCGCCTCTTCCCCTGCAGCGCCGTGCAGCTCGCCGCCTACCGCAAATTTGTTGTGCTGTTCA 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGTGGCGTGCCTGCGCCTCTTCCCCTGCAGCGCCGTGCAGCTCGCCGCCTACCGCAAATTTGTTGTGCTGTTCA 370
Query 293 CAGATGACCTGGGCCACATTTCCCAGTGGAGCTCCATCATGGCTGGGAGTCTCGCAGGCATGGTTTCCACCATT 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAGATGACCTGGGCCACATTTCCCAGTGGAGCTCCATCATGGCTGGGAGTCTCGCAGGCATGGTTTCCACCATT 444
Query 367 GTAACATATCCTACAGACCTCATCAAAACCCGGTTGATCATGCAGAACATACTGGAACCATCGTACAGGGGGCT 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTAACATATCCTACAGACCTCATCAAAACCCGGTTGATCATGCAGAACATACTGGAACCATCGTACAGGGGGCT 518
Query 441 CCTCCATGCTTTTTCTACTATTTACCAACAGGAAGGGTTCCTTGCCCTTTATCGAGGGGTTTCCCTCACTGTTG 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTCCATGCTTTTTCTACTATTTACCAACAGGAAGGGTTCCTTGCCCTTTATCGAGGGGTTTCCCTCACTGTTG 592
Query 515 TAGGTGCTCTCCCGTTCTCTGCTGGCTCCCTTCTTGTTTACATGAACCTGGAGAAAATCTGGAACGGACCCCGA 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TAGGTGCTCTCCCGTTCTCTGCTGGCTCCCTTCTTGTTTACATGAACCTGGAGAAAATCTGGAACGGACCCCGA 666
Query 589 GATCAGTTCTCTCTCCCACAGAACTTTGCTAATGTCTGTCTGGCTGCTGCAGTGACCCAGACCCTCTCCTTTCC 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GATCAGTTCTCTCTCCCACAGAACTTTGCTAATGTCTGTCTGGCTGCTGCAGTGACCCAGACCCTCTCCTTTCC 740
Query 663 CTTTGAGACCGTGAAGAGAAAGATGC------------------------------------------------ 688
||||||||||||||||||||||||||
Sbjct 741 CTTTGAGACCGTGAAGAGAAAGATGCAGAGAATGGAGAGGTGTCTCCATTTCATCAAATATAAAACCAAGTGTG 814
Query 689 -------------------------------------------------AGGCTCAGAGCCCCTACCTCCCACA 713
|||||||||||||||||||||||||
Sbjct 815 AGCCTGTTGCTTTATACCCCAGTGGACTTTGACCCCATCACAGCTCACAAGGCTCAGAGCCCCTACCTCCCACA 888
Query 714 CAGTGGAGGAGTAGATGTCCATTTCTCAGGAGCAGTGGACTGCTTCCGGCAGATAGTGAAGGCCCAGGGGGTCC 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAGTGGAGGAGTAGATGTCCATTTCTCAGGAGCAGTGGACTGCTTCCGGCAGATAGTGAAGGCCCAGGGGGTCC 962
Query 788 TGGGGCTCTGGAATGGATTGACAGCCAATTTACTGAAGATAGTTCCATATTTTGGAATTATGTTTAGCACCTTT 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGGGGCTCTGGAATGGATTGACAGCCAATTTACTGAAGATAGTTCCATATTTTGGAATTATGTTTAGCACCTTT 1036
Query 862 GAGTTCTGCAAGAGAATCTGTCTTTATCAAAATGGTTACATTCTGTCTCCACTGAGCTATAAATTGACCCCAGG 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GAGTTCTGCAAGAGAATCTGTCTTTATCAAAATGGTTACATTCTGTCTCCACTGAGCTATAAATTGACCCCAGG 1110
Query 936 AGTCGATCAGAGTTTGCAGCCCCAGGAATTACGAGAATTAAAGAAGTTCTTCAAAACGAGAAAACTGAAGCCTA 1009
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1111 AGTCGATCAGAGTTTGCAGCCCCAGGAATTACGAGAATTAAAGAAGTTCTTCAAAACGAGAAAACCGAAGCCTA 1184
Query 1010 AAAAACCAACTCTA------------------------------------------------------------ 1023
||||||||||||||
Sbjct 1185 AAAAACCAACTCTATAAAATGGAATGGAACTAGAAGTGCACTGACTGACAGCATGTTGCAATCACAGATAAATG 1258
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1259 TAGCCTCATAACTGTGCACCTGAGGAGGGATGAGAAGCTACTGCTATCTGCTGCTCTGGGAAATGAGATGGTTT 1332
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1333 GGCCATGCACCACCTCAGATCTCCAAACTGATGTCCCTGTGAACACCTGCACTATGAGAAGGTTTCCCAACAAG 1406
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1407 AGTGTATCATGATGGCATTCCACGAGATTTTATAACCAGAGTCTAGCAGTGATAAAATGTACAATTTACGCTCT 1480
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1481 GAATAGAAACATGACACCAAAGAAAGGGCATTGCCATGACATCTCAAAGCAACAGGTAATTGAAGTGGCTGAGT 1554
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1555 GGATACCACGTTGTGAGGTCAGCCACTGGGTCACTTGTAGTCAATGCAAAGCTTGCACAAACCAACGTCAGCCT 1628
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1629 AGTTTCACTCAGTTTGACCTGAGACTTTCCAATACAATCTGTTGTTTTGTTTTGTTTTTAGAGACAGGGTCTTG 1702
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1703 CTCTGTCACCCAGACTGGAGTACAATGACACAATCATAGCTCACTGCAGCCTTTAACTACTGGGCTCAAGACAT 1776
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1777 CCTCCTGCTTCAGCCTCCAGAGAGTTGGGACCATAGGTGCACACCACCACACCTAGCTAATTTTTTGGGGAGGT 1850
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1851 CTTGCTATGTTGCCCAGGCTGGTCTTGAACTCCTGGGCTCATGCAATCCTCCTGCCTTGGCCTCCCAAAGCGCT 1924
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1925 AGGATTAGAGGTGTGAGCCGCTGCACCCTGCCCCAGTACAATCTTTTTTGAACTCAAATTTTTGCTGACATCTG 1998
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 1999 AGTGCACACACCACAGTGTAAATTATGCCTTATCAGAATCTAAATGAAAATAGCGAACATTTAAAAGCTATCAC 2072
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 2073 CATTGTAGTAGAATCATCCTTCTTTTTTGAAATTTGAAGCATCCCAGGCTTAAAATCTTGTGTTTCAGAAAGAC 2146
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 2147 AGTTTATACCATGACTGCTTAATTATCCCCCCAAAGACCTTCTGATTGAAGTCATGTACAGTTCAGTGGCCTAA 2220
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 2221 ATTCTCTGCCTTTTTAACTTGCTTTGCAAGCCTACTCTGAAAATAAGTTATTTAGTCAAGTTATTCTCAAAGAT 2294
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 2295 GTCCCAGTTGCCTAGAAAGGATCAAATGGAACATTTGACACACATACTCAAAAAAATGTAACTGACTATAAACA 2368
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 2369 CTTTAACCTAATCATCTGTATCAAACTTTCTAAAAATCAAATCTCAGGATTGTTCCACTTTAGAGATTCTATGT 2442
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 2443 AAAGTTTATATAACTATACTTGTCAAATAGCACCTATCTATGCATTTAAAAATGCATTAATATCTAACATAAAA 2516
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 2517 TTGTTAATTTATACACACACATACACTCATACATAGAGAGAGATTTTCGGTATGTTGCAAGTATTTTTTCCGAT 2590
Query 1024 ------------------------ 1023
Sbjct 2591 TAAATTTATTTTCCAAAGAAAAAA 2614
