Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10133
Subject:
XR_001746294.1
Aligned Length:
3439
Identities:
569
Gaps:
2869

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATTGAAGATGTACTGTGCTCAGCTCTTTGCCGGAAGCTAAAGCTCCCAATTGGGCCATCCCACCCCACTCTGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACCTCTGCCATCTAGGAACCCAGATGCCCGGAGAGGAGGTCTGTCCTGGGGCCCTTAGTGTCTTCCCACAGGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCAGCGCGTGCCTGCAAGGGCCTGGTCCCGGAATGAACTGTGGATGGAGGCTGCTTTGTCCTTTTCCCCGTCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGATCCATGCCCATAGACACCGCTGACTATAGGCTGGGCCCAGGGTCCCTTCCTCCAGCCTGCAGCAGAGGGGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTTCCAGGCTGGAAAGGGAAGGAGTCCTTTTGTCCCTGACGCAAGCGGGTTGGGGGCCAGCACCCGCTCCAGGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGAGGAAGGGATCCAGCCTGAAGTCCAGACTCCCCGCTCCCTCTAAGCCAGGGCCTGGAGCCTGGAGGCCAGGT  444

Query    1  --------------------------------------------ATGGCCCTGCGGGGTCACCCTGAGCCCCAG  30
                                                        ||||||||||||||||||||||||||||||
Sbjct  445  TCCTTCTTCTACACCAGCCCACGTTGGGTGCCAGCCAGGCTGGGATGGCCCTGCGGGGTCACCCTGAGCCCCAG  518

Query   31  CCAACCAACACCCCACTCTCAGCCACAGTGGGAGGCCCCATCAGCCTCTTCACCCAACCACGTTGCCACTCTGC  104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCAACCAACACCCCACTCTCAGCCACAGTGGGAGGCCCCATCAGCCTCTTCACCCAACCACGTTGCCACTCTGC  592

Query  105  TGCACGGGACCTTGTGTGGTCCCAGGCGTGGCCAGACCCAGACGTCCTGGAGATCTCAATGCAGACACCCGGCG  178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGCACGGGACCTTGTGTGGTCCCAGGCGTGGCCAGACCCAGACGTCCTGGAGATCTCAATGCAGACACCCGGCG  666

Query  179  GCAGTTCCTGCAGGAAGGAGGCTGTCCTGCCACGCCTGCGGGTGACCCGGCCTCTGGTGCCAGAGCCTGCCATC  252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCAGTTCCTGCAGGAAGGAGGCTGTCCTGCCACGCCTGCGGGTGACCCGGCCTCTGGTGCCAGAGCCTGCCATC  740

Query  253  CTTCCTGTTTGTGCTGCCAGGCTGGCAGGGTCCCTTGCCACCGACCTCAGCCGCAGCCACAGCCTGCTCCCTCC  326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTTCCTGTTTGTGCTGCCAGGCTGGCAGGGTCCCTTGCCACCGACCTCAGCCGCAGCCACAGCCTGCTCCCTCC  814

Query  327  CTGGGTGGATTTGAAGGAGCCTCCCCCACCCTCCGCCCCTAGCTTGCTCCTTGAGGACCCTGGGCAGGGTGGCT  400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CTGGGTGGATTTGAAGGAGCCTCCCCCACCCTCCGCCCCTAGCTTGCTCCTTGAGGACCCTGGGCAGGGTGGCT  888

Query  401  GCCATGGGGCCCAATCGTGCGTGGGAACCTGCGAGCTGGCAAACGGGGCTCGGGGGTTTTGCCCAGAAATGGGT  474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCCATGGGGCCCAATCGTGCGTGGGAACCTGCGAGCTGGCAAACGGGGCTCGGGGGTTTTGCCCAGAAATGGGT  962

Query  475  CAGAACGAAAGCCTCTCAGAGGAAAGAGAAGGGCATGAGTCAAAGAGAAAGTCGGGGGGCAGGGGCTCCCCCTC  548
            |||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CAGAACGAAAGCCTCTCAGAGGAAAGAAAAGGGCATGAGTCAAAGAGAAAGTCGGGGGGCAGGGGCTCCCCCTC  1036

Query  549  ATCTCACCCCACCCAGGCCTCC----------------------------------------------------  570
            ||||||||||||||||||||||                                                    
Sbjct 1037  ATCTCACCCCACCCAGGCCTCCTGACTCCCTGGGTTTGTGCGGACCCAGGCAGGCAGCCAACCCCAGCTCCGTG  1110

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1111  GTGTGTGAGCATCGTGATGATCAGGACACAAGCTCTTCCCCGCTGAGCCTTCACTGTGGGCCAGCTTCCCGGTG  1184

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1185  GATGCCCACTGAAGAGGCCTCAACCCAGTGGGCCCCACTCCAGACCAAGAGCAGACCATTGGCCAGCTGCCCCC  1258

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1259  TGCAGACAGCGGCACCCGGGGCAGCAGCAAGGTGAGGGGCACCCAGCCCCAGCCCCAGGGGCGTCTCAGGGAGC  1332

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1333  GGGCTGAGCCTGGCTGTCTTCCTGAGCCCCACCTGCTTCATGGGTTGGCTTGAGCAAGGCAGTCCAGATGCGTG  1406

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1407  TCTCGAGCGCTCCCTGGCGGCATGCTGCAAAGCTACATGGCTCCGGCAACAAGGAAGACTGCCCTTATTCTCAG  1480

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1481  TAACAGGTGGAGCTGGGGGCTGGAGAGCCCCTCGGACCTCGCCTTGGGAAAGCTGGGTGGGTGCACGGAGCCTG  1554

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1555  GCAGGTGGCCAAGGGGACCCCCAAGTGGAGGGATTGGTCGAGGGGCAGCACAGGGTGGTGCAGTGGGTGAGCTC  1628

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1629  AGCCCCTCCCCTCCAACTCTCATCCCATTGAGCCCCAAGGCGTGGGGGGATCACGTCTGTCCTTGTTCTCCTCC  1702

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1703  AGGTGGAGCTGCTGGGTGGGGCTCTGGTCCTCCAGGGACCCACTCTGCACCCCAAGTTTTGCCGGGACCCGCTC  1776

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1777  CTCTGTGTTGTGTGGCTGTAGGGGAGGGCTGCAGCCAGGGACTCTGAACCCGGGGCCGGCCCACCCAGCCACCC  1850

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1851  AGGGTGGGGAACAAGATCGCCTCCCAGGGCCAGAAGCTGGGGATGTCCTTGCTTCCTAGGATGTTGGCTAGGGG  1924

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1925  ATCACACGCCCCACATTCTGGGTCAAGCATGGTCCTGCCCCAGCATCTTGCTGGGTTGGGGGCATCTCTGCACA  1998

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1999  GATGAGTGCCACCCCAGCGTCTCCGCCAGGGTCTGGGCATGTCACTCTTGGGCATCTGTGCTCAGGAGGTCACC  2072

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2073  AGGTGTGGGCAGGGCACCAAGCAGGGAGGTAGCCGAGGCTGGAAGATGCACATCAGTGCCCCGCTGGGCTTCCT  2146

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2147  CAAGTGGGAACTGGTGGAGGGGGCGCTAGGCTGCCGGGCCAGGGTCAGCAGGCTCAGGCCGGCTCAGGGCTCAG  2220

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2221  AGTTGAGCCAGAAACCAAGGTGAAATCTGCCTCTTACTGCCGCCAGGGCCCTTGGGACAGGGACAGGAACAGCA  2294

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2295  GAAGGTAAAGTGGAAAGGAATTGAGTAATGGGCCCCCAGGCAAGGCTGAGCCAGGCCCCAAGCCCAGGATTGGG  2368

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2369  GTCTCCAGAGTCCCTGGGGGCCCCAGGGCAGCTCACCCACAGCCTGGGGCCTATGGGAGCAAGGGGGCTCCTGA  2442

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2443  TGGGTGGGGGCAGGAGCTTGGACAAAGTTGAAGGCCTTCTGTCTGAATTGGCCAGGGGCCAATGAAAGCCAAAA  2516

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2517  AGCTGGTGTGGTGGCTTATGCCTGTAATCCCACTTTGGGAGGCCAAGGCGGGTGGATCACCTGAGGTCAGGAGT  2590

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2591  TCGAGACCAGCCTGGTCAACATGGTGAAACCCCATCTCCACTAAAAATAGCTGGGCGTGGTGGCAGGCACCTGT  2664

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2665  ATGTAATCCCAAATACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGATGGAGGTTGCAGAGAGCC  2738

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2739  AAGATCATATCACTGCACTCCAGCCTGGCTGACAGAGTGAGAATCTGTCTCAAAAAAAAAAAAAACAATTCCAA  2812

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2813  AAAGGCGAGTGGGGAGCAGGGTGCTAGGCTGCATGGGGGCCTATGCCCCCACCGGAGGACCTAGCCCCCTGCCA  2886

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2887  ACCCTTCCCCAGCTCAGGCCCACCAGCTCCCTTCTCACACAGCTGCTCTGGGAGGGAGTCCTTCCTTGCCAATA  2960

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2961  CCTAAGAGAATGGGCAGCAGGGACCCTGAGGACAGGTTGGGGACACCCAGAACAAGAAGAAGATGGGACACACT  3034

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3035  AGGAGGCTCTTGGGCCCCTGCGTCAGGCCAGCAGGATAGGTGTGTATTGTGACCTGAGGGACTGAACGTGGAGC  3108

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3109  TCCAGGGGAACCTCCCAGCCAGTGACACGCTGGCCTTGGGCCAGACGCTGCCCTGCGCCCTTGAGTGACGCTCG  3182

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3183  GGCCTCCCTGCACCCACCCGCTTTCCCTGTGGCTAATGGCTTAGAGTGAAGGATGGTGGGCGTGGGCGTGCCAC  3256

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3257  GTGGGCTCAGCGTCCACCCTGCCCCATGCACGCAGGCACCCATCACACCAGGGCCCACACACAGGCTCCCATCA  3330

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 3331  CACCCTGCCCCATCACAGCAGTGCCCAGAGGGACATGGGGCTCCCAGCTGAGGGCCAGCCCAAGGTCACAGCTG  3404

Query  571  -----------------------------------  570
                                               
Sbjct 3405  CCAGCGAATGTCAACCAGAAAAACGTGAAAAGGAG  3439

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