Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10171
- Subject:
- XR_001744735.1
- Aligned Length:
- 2301
- Identities:
- 261
- Gaps:
- 2028
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 ----------------------ATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC 52
||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGC---------- 434
Query 53 TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC 126
Sbjct 435 -------------------------------------------------------------------------- 434
Query 127 GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 200
||||||||||||||||||||||||||||||||||
Sbjct 435 ----------------------------------------AGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 468
Query 201 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 469 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 542
Query 275 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCT---- 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAA 616
Query 345 ----------------------TAAGAAC-----ATGGAAG------------------GGGTGCTGATGGACG 373
||||||| .|||||| .|||||..| |
Sbjct 617 CTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCA-----G 685
Query 374 TGGAC--TGTGAGAGCGTCTAC---CC--CATTGTG-------------------------------------- 402
.|||| |.|...|||.|||.| || |.|||||
Sbjct 686 AGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCTCCACGACCACGCTGCTTACTTAGTAGA 759
Query 403 -------------------------------------------------------------------------- 402
Sbjct 760 CAACCTGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGGTCTGACAAGCCTGCTGCTGGAGAAGGACC 833
Query 403 -------------------------------------------------------------------------- 402
Sbjct 834 AGAGCACGTGCCACATGGAGCCAGGGCCAGGGACCTTCCACCTCCTAGGGTGAAACCAGGAGAGATTGCTTGCT 907
Query 403 -------------------------------------------------------------------------- 402
Sbjct 908 TCACTTGTACAAGGCAGGAACGGTGGCATGGGGTGGGGGAAACTTGGAGTTGGAAGGTGGCTAATCTTTGATTC 981
Query 403 -------------------------------------------------------------------------- 402
Sbjct 982 TATGTTTTTGATCCTCCTGGCACTCCAGACCTGGGTGATGTGCAGGAGAGCACACTGATAGAAATCCTTGTGTC 1055
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1056 CAGTGCCCAGCAACTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCCGCCACCACGCCTGGCTAAC 1129
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1130 TTTTTTGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCTTGACCTTGTGATC 1203
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1204 CACCTGCCTCATCATCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCATGTTAGACAATTTTTA 1277
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1278 ATTCATCCTCTCTGTGCTGTTGTTTTCTCAGCTGTGAAAGGAATATTCTGGTGGGGACAAGGTTACAGAGTTGC 1351
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1352 TGAGAGGGTCTCATGACATGAAGGTACTGGCCTTGGCACAGTGCCTGGGGGGGCGGGGACTCCGCACATGCCTG 1425
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1426 TGATGTCACAGTTACTGTCAGTTCACAGCGAACCTTCCCTCCTTTTCCTGTTGACTTTCCCACACTCCTGTAAC 1499
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1500 CCTCCCTCCCTCCCTTCTTCCTCTCTCTCTCTCTCACTCACGCACACGCACACACACACACACACACACACACA 1573
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1574 CACACACTCCATTCTCTGTCTCCATGACTCTGGAGTAAACTAACGTCTCGAGTTGCCATTGGAAGCCCCATTGT 1647
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1648 CCTCATTTTGTTTTGTTTTGTTTGTTTGAGACGGGGTCTCGCTCTGTCCCCCAGGCTGGAGTGCAGTGGTGCGA 1721
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1722 TCTCAGCCCACTGCAGCCTCCGCCTCCTAGGTTCAAGCGATTCTCCTGCCTCACCCTCCTGAGTAGCTGTGATC 1795
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1796 ATAGGTGCCCGCCACCACACCCGACTAATTTTTGTGTTTTTTAGTAGAGACAGGGTTTCACTATGTTGGCCAGG 1869
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1870 CTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGC 1943
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1944 CACCATGCCCAGCCTCCGTTGTCCTCATTTAGACTTTCATGGGTTATAGGCACTTTTGACTTCCTGGGGTCCTT 2017
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2018 CTTCAGTTAAAAAAAAAAATTAGAAAATTAGGCCGGGCGTGGTGGCACATGCCTGTAATCCCAGCACTTTATGA 2091
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2092 GGCCGAGGTGGGAGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAATGTGGAGAAACCCCGTCCCTA 2165
Query 403 ------- 402
Sbjct 2166 CTAAAAA 2172
