Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10171
- Subject:
- XR_001744736.1
- Aligned Length:
- 2389
- Identities:
- 261
- Gaps:
- 2116
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGCCGATGTACCAGGTAAAGCCCTATCACCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCTGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCCAACATGCACGGCAGGAGCGGCGGCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCACTTGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTAC 444
Query 1 ------------------------------------ATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGAC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGAC 518
Query 39 ATGCAGGGATGTCCTTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCA 112
||||
Sbjct 519 ATGC---------------------------------------------------------------------- 522
Query 113 CGTCTTTCCTCACCGACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTG 186
||||||||||||||||||||
Sbjct 523 ------------------------------------------------------AGCACCGAGAAGTCCGCGTG 542
Query 187 AAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCG 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 AAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCG 616
Query 261 CTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGA 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 617 CTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGA 690
Query 335 TACTTATCCT--------------------------TAAGAAC-----ATGGAAG------------------G 359
|||||||||| ||||||| .|||||| .
Sbjct 691 TACTTATCCTTAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCA 764
Query 360 GGTGCTGATGGACGTGGAC--TGTGAGAGCGTCTAC---CC--CATTGTG------------------------ 402
|||||..| |.|||| |.|...|||.|||.| || |.|||||
Sbjct 765 GGTGCCCA-----GAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCTCCACGACCACGCT 833
Query 403 -------------------------------------------------------------------------- 402
Sbjct 834 GCTTACTTAGTAGACAACCTGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGGTCTGACAAGCCTGCT 907
Query 403 -------------------------------------------------------------------------- 402
Sbjct 908 GCTGGAGAAGGACCAGAGCACGTGCCACATGGAGCCAGGGCCAGGGACCTTCCACCTCCTAGGGTGAAACCAGG 981
Query 403 -------------------------------------------------------------------------- 402
Sbjct 982 AGAGATTGCTTGCTTCACTTGTACAAGGCAGGAACGGTGGCATGGGGTGGGGGAAACTTGGAGTTGGAAGGTGG 1055
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1056 CTAATCTTTGATTCTATGTTTTTGATCCTCCTGGCACTCCAGACCTGGGTGATGTGCAGGAGAGCACACTGATA 1129
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1130 GAAATCCTTGTGTCCAGTGCCCAGCAACTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCCGCCAC 1203
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1204 CACGCCTGGCTAACTTTTTTGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAGGATGGTCTTGATCTC 1277
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1278 TTGACCTTGTGATCCACCTGCCTCATCATCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCATG 1351
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1352 TTAGACAATTTTTAATTCATCCTCTCTGTGCTGTTGTTTTCTCAGCTGTGAAAGGAATATTCTGGTGGGGACAA 1425
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1426 GGTTACAGAGTTGCTGAGAGGGTCTCATGACATGAAGGTACTGGCCTTGGCACAGTGCCTGGGGGGGCGGGGAC 1499
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1500 TCCGCACATGCCTGTGATGTCACAGTTACTGTCAGTTCACAGCGAACCTTCCCTCCTTTTCCTGTTGACTTTCC 1573
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1574 CACACTCCTGTAACCCTCCCTCCCTCCCTTCTTCCTCTCTCTCTCTCTCACTCACGCACACGCACACACACACA 1647
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1648 CACACACACACACACACACACTCCATTCTCTGTCTCCATGACTCTGGAGTAAACTAACGTCTCGAGTTGCCATT 1721
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1722 GGAAGCCCCATTGTCCTCATTTTGTTTTGTTTTGTTTGTTTGAGACGGGGTCTCGCTCTGTCCCCCAGGCTGGA 1795
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1796 GTGCAGTGGTGCGATCTCAGCCCACTGCAGCCTCCGCCTCCTAGGTTCAAGCGATTCTCCTGCCTCACCCTCCT 1869
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1870 GAGTAGCTGTGATCATAGGTGCCCGCCACCACACCCGACTAATTTTTGTGTTTTTTAGTAGAGACAGGGTTTCA 1943
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1944 CTATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGGA 2017
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2018 TTACAGGAGTGAGCCACCATGCCCAGCCTCCGTTGTCCTCATTTAGACTTTCATGGGTTATAGGCACTTTTGAC 2091
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2092 TTCCTGGGGTCCTTCTTCAGTTAAAAAAAAAAATTAGAAAATTAGGCCGGGCGTGGTGGCACATGCCTGTAATC 2165
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2166 CCAGCACTTTATGAGGCCGAGGTGGGAGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAATGTGGAG 2239
Query 403 --------------------- 402
Sbjct 2240 AAACCCCGTCCCTACTAAAAA 2260
