Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NM_001363570.1
- Aligned Length:
- 3570
- Identities:
- 66
- Gaps:
- 3498
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGAGGGACGAGCGAGACGCCAAAGCCATGCGGTCCCTGCAGCCGCCGGATGGGGCCGGCTCGCCCCCCGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGTCTGAGGAACGGCTACGTGAAGAGCTGCGTGAGCCCCTTGCGGCAGGACCCTCCGCGCGGCTTCTTCTTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCTCTGCCGCTTCTGCAACGTGGAGCTGCGGCCGCCGCCGGCCTCTCCCCAGCAGCCGCGGCGCTGCTCCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCTGCCGGGCGCGCCTCTCGCTGGGCGCCCTGGCTGCCTTTGTCCTCGCCCTGCTGCTGGGCGCGGAACCCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGCTGGGCTGCCGGGGCCGCCTGGCTGCGGACGCTGCTGAGCGTGTGTTCGCACAGCTTGAGCCCCCTCTTCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCATCGCCTGTGCCTTCTTCTTCCTCACCTGCTTCCTCACCCGGACCAAGCGGGGACCCGGCCCGGGCCGGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCGGCTCCTGGTGGCTGCTGGCGCTGCCCGCCTGCTGTTACCTGGGGGACTTCTTGGTGTGGCAGTGGTGGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTGGCCTTGGGGGGATGGCGACGCAGGGTCCGCGGCCCCGCACACGCCCCCGGAGGCGGCAGCGGGCAGGTTGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTGGTGCTGAGCTGCGTAGGGCTGCTGCTGACGCTCGCGCACCCGCTGCGGCTCCGGCACTGCGTTCTGGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGCTCCTGGCCAGCTTCGTCTGGTGGGTCTCCTTCACCAGCCTCGGGTCGCTGCCCTCCGCCCTCAGGCCGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTCTCCGGCCTGGTGGGGGGCGCTGGCTGCCTGCTGGCCCTGGGGTTGGATCACTTCTTTCAAATCAGGGAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCCTCTTCATCCTCGACTGTCCAGTGCCGCCGAAGAAAAAGTGCCTGTGATCCGACCCCGGAGGAGGTCCAGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGCGTGTCGTTAGGAGAAACTGCAGCCAGTTACTATGGCAGTTGCAAAATATTCAGGAGACCGTCGTTGCCTTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TATTTCCAGAGAACAGATGATTCTTTGGGATTGGGACTTAAAACAATGGTATAAGCCTCATTATCAAGCTGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCAGTGGCATGATCTCGGCTCACCGCAACCTCCAGCTCCCTGGTTCAAGCGATTCTCCTGCCTCAGCCTCCGG 1110
Query 1 ------------------------------------------------------------ATGGGGTTTCTCCA 14
|||||.||||||||
Sbjct 1111 AGTAGCTGGGATTACAGGCATGTGCCACCACACCTGGCTAATTTTGTATTTTTAGTAGAGATGGGATTTCTCCA 1184
Query 15 TGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------------- 72
|||.||||||||||||||.|||||||.||||||||||||||.|||||||||.||||||
Sbjct 1185 TGTTGGTCAGGCTGGTCTTGAACTCCCGACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTA 1258
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1259 CAGGGAATTCTGGAGGTGGAAATGGAGTTGATCTTTCAGTGCTAAATGAGGCTCGCAATATGGTGTCAGATCTT 1332
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1333 CTGACTGATCCAAGCCTTCCACCACAAGTCATTTCCTCTCTACGGAGTATTAGTAGCTTAATGGGTGCTTTCTC 1406
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1407 AGGTTCCTGTAGGCCAAAGATTAATCCTCTCACACCATTTCCTGGATTTTACCCCTGTTCTGAAATAGAGGACC 1480
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1481 CAGCTGAGAAAGGGGATAGAAAACTTAACAAGGGACTAAATAGGAATAGTTTGCCAACTCCACAGCTGAGGAGA 1554
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1555 AGCTCAGGAACTTCAGGATTGCTACCTGTTGAACAGTCTTCAAGGTGGGATCGTAATAATGGCAAAAGACCTCA 1628
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1629 CCAAGAATTTGGCATTTCAAGTCAAGGATGCTATCTAAATGGGCCTTTTAATTCAAATCTACTGACTATCCCGA 1702
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1703 AGCAAAGGTCATCTTCTGTATCACTGACTCACCATGTAGGTCTCAGAAGAGCTGGTGTTTTGTCCAGTCTGAGT 1776
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1777 CCTGTGAATTCTTCCAACCATGGACCAGTGTCTACTGGCTCTCTAACTAATCGATCACCCATAGAATTTCCTGA 1850
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1851 TACTGCTGATTTTCTTAATAAGCCAAGCGTTATCTTGCAGAGATCTCTGGGCAATGCACCTAATACTCCAGATT 1924
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1925 TTTATCAGCAACTTAGAAATTCTGATAGCAATCTGTGTAACAGCTGTGGACATCAAATGCTGAAATATGTTTCA 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 ACATCTGAATCAGATGGTACAGATTGCTGCAGTGGAAAATCAGGTGAAGAAGAAAACATTTTCTCGAAAGAATC 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 ATTCAAACTTATGGAAACTCAACAAGAAGAGGAAACAGAGAAGAAAGACAGCAGAAAATTATTTCAGGAAGGTG 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 ATAAGTGGCTAACAGAAGAGGCACAGAGTGAACAGCAAACAAATATTGAACAGGAAGTATCACTGGACCTGATT 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 TTAGTAGAAGAGTATGACTCATTAATAGAAAAGATGAGCAACTGGAATTTTCCAATTTTTGAACTTGTAGAAAA 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 GATGGGAGAGAAATCAGGAAGGATTCTCAGTCAGGTTATGTATACCTTATTTCAAGACACTGGTTTATTGGAAA 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 TATTTAAAATTCCCACTCAACAATTTATGAACTATTTTCGTGCATTAGAAAATGGCTATCGAGACATTCCTTAT 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 CACAATCGTATACATGCCACAGATGTGCTACATGCAGTTTGGTATCTGACAACACGGCCAGTTCCTGGCTTACA 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 GCAGATCCACAATGGTTGTGGAACAGGAAATGAAACAGATTCTGATGGTAGAATTAACCATGGGCGAATTGCTT 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 ATATTTCTTCGAAGAGCTGCTCTAATCCTGATGAGAGTTATGGCTGCCTGTCTTCAAACATTCCTGCATTAGAA 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TTGATGGCTCTATACGTGGCAGCTGCCATGCATGATTATGATCACCCAGGGAGGACAAATGCATTTCTAGTGGC 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 TACAAATGCCCCTCAGGCAGTTTTATACAATGACAGATCTGTTCTGGAAAATCATCATGCTGCGTCAGCTTGGA 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 ATCTATATCTTTCTCGCCCAGAATACAACTTCCTTCTTCATCTTGATCATGTGGAATTCAAGCGCTTTCGTTTT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TTAGTCATTGAAGCAATCCTTGCTACGGATCTTAAAAAGCATTTTGATTTTCTCGCAGAATTCAATGCCAAGGC 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 AAATGATGTAAATAGTAATGGCATAGAATGGAGTAATGAAAATGATCGCCTCTTGGTATGCCAGGTGTGCATCA 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 AACTGGCAGATATAAATGGCCCAGCAAAAGTTCGAGACTTGCATTTGAAATGGACAGAAGGCATTGTCAATGAA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TTTTATGAGCAGGGAGATGAAGAAGCAAATCTTGGTCTGCCCATCAGTCCATTCATGGATCGTTCTTCTCCTCA 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 ACTAGCAAAACTCCAAGAATCTTTTATCACCCACATAGTGGGTCCCCTGTGTAACTCCTATGATGCTGCTGGTT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TGCTACCAGGTCAGTGGTTAGAAGCAGAAGAGGATAATGATACTGAAAGTGGTGATGATGAAGACGGTGAAGAA 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TTAGATACAGAAGATGAAGAAATGGAAAACAATCTAAATCCAAAACCACCAAGAAGGAAAAGCAGACGGCGAAT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 ATTTTGTCAGCTAATGCACCACCTCACTGAAAACCACAAGATATGGAAGGAAATCGTAGAGGAAGAAGAAAAAT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GTAAAGCTGATGGGAATAAACTGCAGGTGGAGAATTCCTCCTTACCTCAAGCAGATGAGATTCAGGTAATTGAA 3552
Query 73 ------------------ 72
Sbjct 3553 GAGGCAGATGAAGAGGAA 3570
