Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
NR_024561.1
Aligned Length:
3681
Identities:
65
Gaps:
3609

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTAATTGCTGCGGGGAGGACAGGCCAGCTCTGGAAGAAAACAGGTGGACCTGGGTCCCATTAACCTGGACAGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACCTCCAAGATGAGCATGAGGGGGCTGCTGGATCTGTTCTCCTTTCACAGCTGTATCCTGAAGAATGGCAGTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCGGAAGAGCCACAGGATTCGGCAAAGACGGACACACAGAAATGGGTTCTCACTACGTTGCCCAGGCTGGTCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGAACTCCTAGACTCAAGCGATCCTCCCACCTCAGCCTCCCAAAGCACTGGGATTACAGACATGAGCCACCGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCGGTCAGGTGCAGCCGTTGGGGACTGCAAAGCTGTTGATGCAGAAGGCCTAGTGCCTGGGGATGCCCACATT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCTGGTGTCTGCCACATTCAGGATGCCTGAGGTCCGGGAGCCAGGAAGGGTGAAGTAGTCCCTCTGTCGGCCGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGTTGAAGCCTGCCTGGGGGTGTCATTTGGAACAGGGTCAGCCCACCTGCGTCCTCACCCTCCCCAAGGACCCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGGAGGCCCCTGTGGGTTCCCCACTCACCTGGGCCGCAATGCCCCCCAGGCCGTGGTGGGGGCTCCCACCGCTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCCACCCCCATGGTCCACTGGATGTCCTTGTGGTGAAACAGCACCCAGGAGGGGCCGCTGCCCAGGGCCAGCAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTCCTGGAAGGTGTTCACCTGCAGGGCAAGCGCCAGGAGCCAGGGTGTCGTGGGCTGGTCCAGGGGCACCCAGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACCCTCCTCACTGCCCAGTCCTCAACCGAGCTCCATCTGCACCACTAAGCTGGCTGCTTCCAGCTGTGCCACCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCTGGGCCCCCATCCACACCACATCCCGGGCCCCTACCCATGCCACATCCCAGACCCCCATCCACGCCACCTCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CAGGCCCCTGTCCACACCATGTCCACAGCTGCCTCTGCTGGCACCTGTGCCAGCCTTCCTTTCACATCCCCCAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCTCGATTTTTCTGCTCTGCTCTCATCCCCTCTCTCTCTCCGTCTCTCTCCTTTTCCTATTCTCTGTCTCTCCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCTGATCATCTCACTCCTCTCGCTTGCTGTCTTGCCTCCTCTCTCTCGCCATTTCTCTCCCTGTTCGTGTCTTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTCTTTCTCACCCATTTTCTCTACCTCGCTGCATCTCCATGCTTCCGTCTCTCTGTCTCTCTCTTCCCGCCCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTCTATCTCTCCCTCGTTCCCCCATCTCCGTCTCTCCTCCGTGGTGTCTCCTCCTTACCCAGGAATCCAAGCCC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTCTTCCCAAGGGGTTGGGCCAAACAGCCTCAGCCTGGGCCCTTCTCTGCCACCCGCTTCCTCACCTGGGGACC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAGTGCCCCGTAAAATGGAATTTGGTCCCACATGGCCACCAGCAGGGCGCAAGGGGTGGGCGGGGCATGGGGGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGGCTGAGGCCAGGTCTCAGGCCACCTGCTGCGGCAGCTCTGGCTGGCGGCTCTGCCGGTACCACATCTGGCCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTGCTCAGTGTGGACCCATTGGCCCAGAACGGGACTGCGAAGGCCTGGCCCATCTCCTGGGGAAATGCCTCCAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TGTGAAGAGAGCCACAGGCTCCCCGAAGGACACCAGCCCATTGGTGCAGAACTGGGGGAAGTGAGGAAGGGCAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GACCCGCAGGGGGGTGTTGGCAGGGCAGGGGACAGAAGAGGGACAGGGCCCGCCCCAGGAAGACAGAGGACGAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GCCAGAAGGAGCCAGGAGCTATAGATATAGACAGGCTCCGAGTCAAGAGTGGGGTGGGGAGAAGAGAGAGAGCC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CAGGGACCGCACGGTCAGGGCCAGGGCACTCACATAGGCCGTCCCGTGTGTGGCTTCAAAGAGCATGAAGGGCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCAGCAGCCGCAGCTCCTCAGAGAAGTCATCATCCTCTGCAGGGAGGGCCTGATCCCCACACTCCAGCCCATAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GGGTACAGGAGCGAGGCTGGGGACACGAGACCACTGAGGCTCCCCTCAGAGCCCCAGGGCAGGGCTGTGTCCCC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TCAGTCCCCAAGAGAAAGCTCCAGGTCCCCTGAGGGACTCCAGGGTGGGGCCATGGCTCCTCAGACCCCTGGAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CCCTCCCTGCCTGTCCACATGGCCCTGTCCTCTCTCCAGGTTAGGGAGCACATCCATTCTCACCTCTGATCTCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TTGCTCCAAGTCACTTGGTTCTGTAGGACTGAGGGGAAGGATGTCAGCTAAGGGCTGGGGCCCACGTGGCACAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TCGACCCCCTTCCAGAGTCCCCACTCCTACTCACCCACCAGCAGAAGCCACAGTATCCCCATGGTGGCTGCAGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGCTGCGGGCCAGGCGGGCTTATACCAGGGCAGAGGTGGGGCCAGGGTGGGGACGGGGCAGCTGGAGCTCACCT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TCCATTGTTCGAGGGTCCAGGGGGCCTGGGGGTCTCCCAGGGATCCTGGTTCCCATCCGGTCTGCCTGAGGCTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGCCAGGTCTGGGGTTGGTGGGCAGGGCAAGGGAGGAAAGAGGGGATGGAAATCTTCCAGGGCTTTCCCAGGGG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GCCGGGTTGCCAGACCCTGGAGGAACCCCCCACCCATTAGCAGGGCTGGGCACAAGTCAAGCGATCCACAGTGG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GAAAGTTGAGCCACTGCTTGGTGAAGGGCCGCTGCTGACAGACAGCTGAACATGCAGGGAGCCTCTTCCCATGG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GGCCCTGCTGGTTCTCTTGGAGCAGGTTAGAGATGAGCACACAGCATCCAGGAACGGAGTGCATGTGCATCAAG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CAGGGCCAAGATGTGTGGCTGGGGAGACTCGTGGGCTGCTGGCCAGCCCCGGGGGCCCAGGGGTGGGCATCTGC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGGGCATGGCTGGGGCTGCCATGGTGGATAGTCAAGGTCAGGCATTTAGGAGTGTTACTGGACCCAGAAGGGGA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GATTCGCCTGGAGACGTGAACGGGGAGACGGGGAGGAGGAGCATACAGGCAAGGGGGCTCGTTACTGTGCACCT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GTGAGATTCACGGACCACCCTGGTGGAGGAGGCTCAGAGTTAGGCACTGGGGACTCCATCTTCAAAGCAGTGTC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CCAAAGGGGTGCTCCAGACCCTCAAACCCCAGACAGCCCTTTACCTGGTCAAACCACATGGGACAGAGGGTCAC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CTGTGTTCCTGGACCAAACTGAGGATTAGGCTGCTATTTCTCATGGCCCAGTGATGAGATGCAGATAAACTGGG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AGAACAGGGAGGTTTTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTTGAGACGGAGTCTCGCCCTATCGC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CCAGGCTGGAGTGCAATGGCACTGTCTCGGCTCACGGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCC  3330

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    |.
Sbjct 3331  TCAGCCTCCCAAGTAGTTGGGATTACCAACACCCACCACCATGCCTGGCTAATTTTTGTATTATTAGTAGAGAC  3404

Query    3  GGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC----  72
            |||||||||||||||.|||||||||.||||.|||.||||||||||||||||||||||.|||||.||||||    
Sbjct 3405  GGGGTTTCTCCATGTTGGTCAGGCTTGTCTCGAATTCCTGACCTCAGGTGATCCGCCTACCTCGGCCTCCCAAA  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  GTGCTGGGATTACAGGCATGAGCCACCGCACCCAGCGAAAAGGGAGTTTTTATTTCTGTAACTGGTTATAGGGT  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  GAAAGCCTGGAAATTGTCCCCAGACCAACTCAAAATTACAAAGTTTTCCAGAGCTTATATACCTTCTAAGCTAT  3626

Query   73  -------------------------------------------------------  72
                                                                   
Sbjct 3627  ATGCCTGTGTGTAAGTGTAGTTTCTTCAGACCCCCAATTAAACTTGTTTAATCCT  3681

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