Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_028388.2
- Aligned Length:
- 5084
- Identities:
- 65
- Gaps:
- 5012
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTAAGCTTCGACGCAGGAGGCGGGGCTGCTCAGTCCTCCAGGCGTCGGTACTCAGCGGTGTTGGAACTTCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCTTGCTTGCCTGTGCGCGCGTGCGCGGACATGGCCTCAAACGATTATACCCAACAAGCAACCCAAAGCTATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCCTACCCCACCCAGCCCGGGCAGGGCTATTCCCAGCAGAGCAGTCAGCCCTACGGACAGCAGAGTTACAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTTATAGCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATGGCCAGAGCCAGAACAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGCTATGGAACTCAGTCAACTCCCCAGGGATATGGCTCGACTGGCGGCTATGGCAGTAGCCAGAGCTCCCAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTCTTACGGGCAGCAGTCCTCCTACCCTGGCTATGGCCAGCAGCCAGCTCCCAGCAGCACCTCGGGAAGTTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTAGCAGTTCTCAGAGCAGCAGCTATGGGCAGCCCCAGAGTGGGAGCTACAGCCAGCAGCCTAGCTATGGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAGCAGCAAAGCTATGGACAGCAGCAAAGCTATAATCCCCCTCAGGGCTATGGACAGCAGAACCAGTACAACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAGCAGTGGTGGTGGAGGTGGAGGTGGAGGTGGAGGTAACTATGGCCAAGATCAATCCTCCATGAGTAGTGGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGTGGCAGTGGTGGCGGTTATGGCAATCAAGACCAGAGTGGTGGAGGTGGCAGCGGTGGCTATGGACAGCAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCGTGGAGGCCGCGGCAGGGGTGGCAGTGGTGGCGGCGGCGGCGGCGGCGGTGGTGGTTACAACCGCAGCAGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTGGCTATGAACCCAGAGGTCGTGGAGGTGGCCGTGGAGGCAGAGGTGGCATGGGGCCCTCGGGACCAAGGATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACGTCATGACTCCGAACAGGATAATTCAGACAACAACACCATCTTTGTGCAAGGCCTGGGTGAGAATGTTACAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGAGTCTGTGGCTGATTACTTCAAGCAGATTGGTATTATTAAGACAAACAAGAAAACGGGACAGCCCATGATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AATTTGTACACAGACAGGGAAACTGGCAAGCTGAAGGGAGAGGCAACGGTCTCTTTTGATGACCCACCTTCAGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TAAAGCAGCTATTGACTGGTTTGATGGTAAAGAATTCTCCGGAAATCCTATCAAGGTCTCATTTGCTACTCGCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TATGGAGGTGGTGGCAGTGGTGGTGGTGGCCGAGGAGGATTTCCCAGTGGAGGTGGTGGCGGTGGAGGACAGCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATGAACTTCTCTTGGAGGAATGAATGCAACC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGTGTAAGGCCCCTAAACCAGATGGCCCAGGAGGGGGACCAGGTGGCTCTCACATGGGGGGTAACTACGGGGAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GATCGTCGTGGTGGCAGAGGAGGCTATGATCGAGGCGGCTACCGGGGCCGCGGCGGGGACCGTGGAGGCTTCCG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGGGGGCCGGGGTGGTGGGGACAGAGGTGGCTTTGGCCCTGGCAAGATGGATTCCAGGGGTGAGCACAGACAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATCGCAGGGAGAGGCCGTATTAATTAGCCTGGCTCCCCAGGTTCTGGAACAGCTTTTTGTCCTGTACCCAGTGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACCCTCGTTATTTTGTAACCTTCCAATTCCTGATCACCCAAGGGTTTTTTTGTGTCGGACTATGTAATTGTAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTATACCTCTGGTTCCCATTAAAAGTGACCATTTTAGTTAAATTTTGTTCCTCTTCCCCCTTTTCACTTTCCTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAAGATCGATGTCCCGATCAGGAAGGTAGAGAGTTTTCCTGTTCAGATTACCCTGCCCAGCAGGAACTGGAATA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGTGTTCGGGGAGAAGGCCAAATGATATCCTTGAGAGCAGAGATTAAACTTTTCTGTCATGGGGAAAGTTGGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTATAAATGAGAAATGAAGAACATGGGATGTCATGAGTGTTGGCCTAAATTTGCCCAGCTATGGGGAATTTTTC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTTTACCACATTTATTTGCATACTGGTCTTAGTTTATTTGCAGCAGTTTATCCCTTTTTAAGAACTCTTTGATC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTTTGGCCCTTTTAATGGTGAGGCTCAAACAAACTACATTTAAATGGGGCAGTATTCAGATTTGACCATGGTGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGAGCGCTTAGCCACTCTGGGTCTTTCACAGGAAGGAGAGTAACTGAGTGCTGCAGGAGTTTGTGGAGTGGAGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CAGGATCTAGGAGGTGAGTGACTCCCTTCCTAGCTGCCCTGGTGAACAGCGCTTGGGTAGATACCTGCTATAAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GAGACTGGTCTGGCTGGGTTACTTTCACATCCTGCCTGTACTCAGAGGGCTTGAGGTCATTGACATTATGAGAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTTAGGCTTGATCCCTTTTTGATTGGAGGGTGGAAGGCCCTCCTAAGGGAATGATAAGTGATAAGAGGGGGAAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGGTTGCAGCCAATGAGTTAAAACCTTAGAGCAGTGCTCCTCAGCCTCTTACCATGTGGTTGTAAACTTGCACG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TACCTGCCAACCAGTTATTTAGCATGCTTTTTATTTTAGTTACACAGAGCGTAACATTAACCCAAGAGCAGAAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGTTTTATTTACAGGGTTTTCGAACTTGGTTTGTAAGACAGCTGCCATCACAAGCATAGCTTACAAATGTGCTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGGACCCCTAATTGGGAAGTGCTTTCCTCTCAAATTTTTATTTTTTATTTTTAGAGACAGAGTCTTGCTCTGTC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGTAGCCTCTGCCTCCTGAGTTTAAGCGATTCTCCTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCTCAGGAGAATCCCAGCTTCTGAGTAGCTGAGACTACAGGCGTGGGCCACCATGCCCACCTAGTTTTTGCATT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTTAGTGGAGGTGTGGTTTCACTGTGTTGGCCAGGCTGGTCTCTTAACTCCTGACCTCAGGTGATCCACCTGCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTGGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCCGCTGCATCTGGCCATCCTCTCAAATTTTCAAGTGTTC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CACAAGTATGTTCTCTACTGAAGAGTTGCTGCATCCTTGAATCTTGGGTGATTTGAGGCACAGAAACTATGACT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTATTTTTTGAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCACGTTTTTCGGCTTACCGCAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTGCCGCCTCCTGGGTTCAAGCGATAGCTGGGATTACAGGCATGCGCCACCATGCCCAGCTAATTTATTTGTAT 3330
Query 1 -----------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACC 63
|.|||||||||||||||.||||||||||||||.|||||||.|||||||||||||..||.||||
Sbjct 3331 TTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGATGTGCACACC 3404
Query 64 TCAGCCTCC----------------------------------------------------------------- 72
|||||||||
Sbjct 3405 TCAGCCTCCCAATAAACCATGACTTTTAAGAGGAATAGCAGGTTTACTTCCCCTGCCAGCATTGGGGTGCTCTC 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TAAGCAACAGTAGGCGGAGAGTGGTCTGGCGTATTAAAAACAAAGGATCGTCAAGTGGGCCTTCCCAGGCATTG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 CTTTGACTTAGTACATGTAGAGGATGTGGCAGTTCTCTCCGTCCCTGCCACTGCTGGTTTCTTTGTTAAATGTT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TAGTTGAAATGGCCTGATACGATATTTGAGTAGTTCACTGTTGGTGCTTTGCCTAGCAGGATTCTAATCTTGCT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TTGGTTGTGGTCCCCTGATGCCCTCCTGTTAGGAGTGGAGGAGGTCGAAGCTCCTTGTAAGATATGATTACTGG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 GACCATTAGTGTCAAGTTCCTGTGTCCTTCAAATGGCATATGTGATTGGCCTTGACCTTAAAAGGAAATAGGGT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CCCAGGTGACTGTTTAGTGGGTAGGTCCAGTTTGGGGGGATCTTCCAGGAGAATGGATAGAGACACCTAGCAGC 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 AGAGAGAACATTGGTGCCTCTCAAGCCAACCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCTTCC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 TCGCTACCACACCTGGGTAATTTTTTTTTTAATTACTTTTTTTTTTTTAAGAAACAGGGTTTCACTGGGTTGCC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CAGGCTGGTCTTGAACTGGCCTCAAGTGACCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATCACAGGTGTGAC 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CCACTGCGTTTGGCCAGAATACTCTATTCTTACTGAATGATTGAAATCTGTCTTGAAGCATTAGGTGTCCCATT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TTTGTGAGTTGGAATTGGGACAGGCTAAGTAGGAAGTGAGGAGGGTGGGGAGAGCTGTGCTGTAGGTCTGTTTG 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TCCCTTCCTTGATGTAGCCTTCAGTTAGCCCTTTCAGCTTTTTTCCCCATCTTGTGCCGGGCCTTCCTGGGTTT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CAGTACTTGGATGTAGGGCTGCAGTTATGTCAGTGGTGGGTAGATTGACCAGGAATTAAGGTCTAGGGTCCAGC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 CCATGTGAGACTTGACTCACTGATCTACCTTTAGGCATGTCTTCCTTCCAGTCTCATCCTTTTTAAATTTTTTT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TTTTTTTTTGAGACGGTCTCACTCTCACCCAGGCTGGATTGCAGTGGTGTGATCTCGACCAACTGCAACCTCTG 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 CCTCCCACCCGCAAGCTATCTGCCCACCTCAGCCTCTGGAGTAGCTGGGACGGGACTACAGGCACCTGCCACCA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 TGACTGGCTAATTTTTTTTTGTATTTTTTGTGGAGATGGGGTCTTGCCATGTTGCTCAGGCTGGTCTGGTCTCA 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 AAACTGCTCTGGGCTCAAGTGATTGTCCCACTTTGGCCTCCCAGAGTGCTGGGATTAAGGTGTGAGATACTGTG 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 TCCGGCTATGAAAATTTTATTTTTAATTAACTTGTATATATTTATGGGGTACAATGTCCTATTTCTGTACATGT 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 ACACATTGTGGAATCAAATCAGGCTAATATATCCATCACTTCATATCATTAGCATGAATGAGAACATACAAAGC 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 CACTCTTAGAAAATTTTGAAATTTATGTTATTTCAGCCCTTTTATGCTGGAGGTTGCAAATGTTTTGTGAATAA 5032
Query 73 ---------------------------------------------------- 72
Sbjct 5033 TCAGACCAAAAATAAAAACAAAAAATGATTGACTTCAGTCATTCAGTAAGAA 5084
