Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_036434.2
- Aligned Length:
- 3542
- Identities:
- 63
- Gaps:
- 3470
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTGAGGCGAAGCTTCGGAGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGCCGCTCTAGCGGCCGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTGAACTATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGAAAAGACATCACCAGATAGAGATAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATCATTATTCAAGATCACGATCAAGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGCCGGAGCAGAAGCAAAGAGCGTGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATGCGCGAAGAGACTGAACTGAAGACGCTGCAGACTCAGATAGCAAAATAATAAGCCTACTTCATGATAAGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACATAATGACAAAGAACATTCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACAAACGCAAAGAAAGAAAGTCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGTAGAAGCAGGGAGCGGAAGAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAGGAAGAAATCGAGATCCAGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACAGGCATAGGACTAGAAGCAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGAAGATTTAGCAGAAGTTTAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCGGACTCCAAGTCCACCTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACAGGAAGCTTTAGCTAGAAGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCAGCAGCTGCAGCTACTGGAGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTACTATAACCCAGCCGCTGTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGTCAAATTTAGGAAATTGATGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACACACAAAGAGGAATGGGTTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTTTGAAAATGATCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTTGTAAAGTTTGGGACTTATAGACTTCTTGTTCTGATGTCACGTCCTTGTTCACCAAACAGCTAGCACTCTAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTTGCATGGGTGTTGCATTGACTTTAATTTATTGAAAAATACAAATTTTTGTAAATATCAGATCAGTGATACTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTGTTAGTGTTGTAATCAGGTTAAACCCACTTCCATTAAACTTGACAGGACTATAGAAGGATAATATTTTTTAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTCATGAATTCTACTTTTCAAATATATAAAAGCTGCAGGTGGGGATAAAATCTCATACATGGATTTTTTCGTGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCGCTGTCTTGTGTACTTTTGTACTTAACCTTGTACAGTTATTTTCATCTCTTGAAACATGAAAGAAATGTTAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTAGATGTTCTTTAGAAGATCTGGCCATTTGGTACATAATCCAGCACAGATAAGCTGGGTGGTAATGATAATAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAATGGTTTTCTCAAAACTGGTGTTAATTTAAGTTACCTGGGATGTTTCTTTGAATTTGTTTTATAGTTTCTGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGCATTTGGCAATTGCTGTTAGAAAACACTAGCTAGAAATCCCCTCCCCACCACCCTTTTTAAGGCCAGTTAAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TATACTACAGTCAATACCGTGGTGAGCAAAAATGTAAAAGGTGGAAGGAGAAAACTTACTAAAATAGTATGTTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCCTATTATAAGGGACAGACTTGGTATTCAGTATTTGTCAAATATTACATGTGTTATTCAGGAGATAGATTAAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCATTAAAGGGATGTAAGCACTTTTATTTTAATAAAGTGCCTTATAACAAGTTCTTTGCATGCTTTTTGCTCAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TATCCCTTTGAAGTCTTCTCCAGCATAGACTATAAAATATTAAAATATTAGAAATTTTTTTTGTTTGTTTTTTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GAGACAGGATCTTGCTCTGTTGCCTAAACTGGGTGCAGTGGCACAATCTCGGCTCACTGCCAGAGCCTCTGCCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCCAGGTTCAAGCAATTCTCCCACCTCCACCTCCCATGTAACTGGGATTACAGGCGTACCACCGCACCCAGCTA 2516
Query 1 ---------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGA 53
.||||||||..||||||.||.||||||||||..||||||||||||||||||||
Sbjct 2517 ATTTTTGTATTTTTAGTAGAGGTGGGGTTTTACCATGTTGGCCAGGCTGGTCCTGAACTCCTGACCTCAGGTGA 2590
Query 54 TCCGCCCACCTCAGCCTCC------------------------------------------------------- 72
|||.|||.|||||||||||
Sbjct 2591 TCCACCCTCCTCAGCCTCCCAAAGTGCCGGGATTATAGGCGTGAGCCACTGCAGCCAGCCTAGAAAATGTTTTG 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TTACTAGATTGAACATAAATCTGGAGCCAAGGGGTGGGGGGGGCCTGCAAAACTTGAAGTTAATTTACTTCAGT 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 TACAGCAAAGTAATAAGGTTTGGCTTTCCTTTGAAAAATCCTTTGGAAAACATCACAGAATGAGAGCACATTAC 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 AATCAGGGAAGACTACAGGAATAAGATTGACAGCCTTATTTTAAAAGCTGGAATTAAGTCTTGCCAACTTGCTC 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 ATTAGGTATTTTTTTTATACATGAAAATGAAGTAATGGGGTGTTTTCTTTTTTTTTGCTTTCTGTCCTAGGCTG 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 GAGTGCAGTGCATTGCAGCAGGCTCCCCCAGGCTCAAGCAGTCCTCCCACCTCAGCCTCTTGAGTACCTGGGAC 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 CACAGGTGCTCACCAACACACCTAGCTTGTTTTTAATTTTTTATAAAGACAAGGTCTTGTTACGTTGCCCAGGT 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TGGTCTTGAATTCCTGGCCTCAAGCAATCCTCCCACCTCAGGGCTCCCAAAGTGATGGGGTTACAGGTGTGATC 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CACTTCACCTAGCCAGATTGTAAGATTTTTAATGTACTTTAATAAACCTTTCATTTTCCCAGAGCACAGAAATT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 CTATGGCAAAATGGCTTTTCACCGTGTTTCAGTGACAAATCTAAGCCTTCTAAGGAAATGACACTATGGATCCT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TCATTTCGTGATCATCAACATTTTTCAATTAAGCTCTGCCTTTTTAAATCAATCTTATTAAAAATGTTCATGAC 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 CTTCTAAGGCAGTGTGGACGCAAAAGCTTCCTGTGTGTCTACAGTTATTTTAGGAGCTGACCATACATGATGAG 3478
Query 73 ---------------------------------------------------------------- 72
Sbjct 3479 TGATACAGCCTGTACTTTGCTCATCTAGAGCAGCACTGTCCAATAAAATATGTGTGTATATGTA 3542
