Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_036435.2
- Aligned Length:
- 3561
- Identities:
- 63
- Gaps:
- 3489
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTGAGGCGAAGCTTCGGAGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGCCGCTCTAGCGGCCGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTGAACTATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGAAAAGACATCACCAGATAGAGATAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATCATTATTCAAGATCACGATCAAGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGCCGGAGCAGAAGCAAAGAGCGTGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATGCGCGAAGAGACTGAACTGAAGACGCTGCAGACTCAGATAGCAAAATAATAAGCCTACTTCATGATAAGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCAACTTCTTCTTAAAACAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTAGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAAGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACCTCCCTTCAGAGGCAGAAACACAGCAATGGATGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGGAAGCTTTAGCTAGAAGGTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTACTGGAGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAATTTGCTGAACAAGAGAAAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGAAATATGGGAAAAATTGAATT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGAAATTTAGATGCTCAGTATGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AATGGCAAGATCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATCTTCAATGCGAGGAATGGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGTTTGAAAATGATCACACTTGTAAAGTTTGGGACTTATAGACTTCTTGTTCTGATGTCACGTCCTTGTTCAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAAACAGCTAGCACTCTAGCTTGCATGGGTGTTGCATTGACTTTAATTTATTGAAAAATACAAATTTTTGTAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTAAACCCACTTCCATTAAACTTGACAGGACTATA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAAGGATAATATTTTTTAGTTCATGAATTCTACTTTTCAAATATATAAAAGCTGCAGGTGGGGATAAAATCTCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TACATGGATTTTTTCGTGTCCGCTGTCTTGTGTACTTTTGTACTTAACCTTGTACAGTTATTTTCATCTCTTGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AACATGAAAGAAATGTTATGTAGATGTTCTTTAGAAGATCTGGCCATTTGGTACATAATCCAGCACAGATAAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGGTGGTAATGATAATAAAAATGGTTTTCTCAAAACTGGTGTTAATTTAAGTTACCTGGGATGTTTCTTTGAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTTGTTTTATAGTTTCTGTAGCATTTGGCAATTGCTGTTAGAAAACACTAGCTAGAAATCCCCTCCCCACCACC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTTTTTAAGGCCAGTTAACTATACTACAGTCAATACCGTGGTGAGCAAAAATGTAAAAGGTGGAAGGAGAAAAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTACTAAAATAGTATGTTTTCCTATTATAAGGGACAGACTTGGTATTCAGTATTTGTCAAATATTACATGTGTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATTCAGGAGATAGATTAATGCATTAAAGGGATGTAAGCACTTTTATTTTAATAAAGTGCCTTATAACAAGTTCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTGCATGCTTTTTGCTCATTATCCCTTTGAAGTCTTCTCCAGCATAGACTATAAAATATTAAAATATTAGAAAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTTTTTGTTTGTTTTTTTGAGACAGGATCTTGCTCTGTTGCCTAAACTGGGTGCAGTGGCACAATCTCGGCTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACTGCCAGAGCCTCTGCCCCCCAGGTTCAAGCAATTCTCCCACCTCCACCTCCCATGTAACTGGGATTACAGGC 2516
Query 1 ----------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGG 34
.||||||||..||||||.||.||||||||||..|
Sbjct 2517 GTACCACCGCACCCAGCTAATTTTTGTATTTTTAGTAGAGGTGGGGTTTTACCATGTTGGCCAGGCTGGTCCTG 2590
Query 35 AACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------------ 72
||||||||||||||||||||||.|||.|||||||||||
Sbjct 2591 AACTCCTGACCTCAGGTGATCCACCCTCCTCAGCCTCCCAAAGTGCCGGGATTATAGGCGTGAGCCACTGCAGC 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 CAGCCTAGAAAATGTTTTGTTACTAGATTGAACATAAATCTGGAGCCAAGGGGTGGGGGGGGCCTGCAAAACTT 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 GAAGTTAATTTACTTCAGTTACAGCAAAGTAATAAGGTTTGGCTTTCCTTTGAAAAATCCTTTGGAAAACATCA 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 CAGAATGAGAGCACATTACAATCAGGGAAGACTACAGGAATAAGATTGACAGCCTTATTTTAAAAGCTGGAATT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 AAGTCTTGCCAACTTGCTCATTAGGTATTTTTTTTATACATGAAAATGAAGTAATGGGGTGTTTTCTTTTTTTT 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 TGCTTTCTGTCCTAGGCTGGAGTGCAGTGCATTGCAGCAGGCTCCCCCAGGCTCAAGCAGTCCTCCCACCTCAG 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 CCTCTTGAGTACCTGGGACCACAGGTGCTCACCAACACACCTAGCTTGTTTTTAATTTTTTATAAAGACAAGGT 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 CTTGTTACGTTGCCCAGGTTGGTCTTGAATTCCTGGCCTCAAGCAATCCTCCCACCTCAGGGCTCCCAAAGTGA 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TGGGGTTACAGGTGTGATCCACTTCACCTAGCCAGATTGTAAGATTTTTAATGTACTTTAATAAACCTTTCATT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TTCCCAGAGCACAGAAATTCTATGGCAAAATGGCTTTTCACCGTGTTTCAGTGACAAATCTAAGCCTTCTAAGG 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 AAATGACACTATGGATCCTTCATTTCGTGATCATCAACATTTTTCAATTAAGCTCTGCCTTTTTAAATCAATCT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TATTAAAAATGTTCATGACCTTCTAAGGCAGTGTGGACGCAAAAGCTTCCTGTGTGTCTACAGTTATTTTAGGA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GCTGACCATACATGATGAGTGATACAGCCTGTACTTTGCTCATCTAGAGCAGCACTGTCCAATAAAATATGTGT 3552
Query 73 --------- 72
Sbjct 3553 GTATATGTA 3561
