Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_036436.2
- Aligned Length:
- 3483
- Identities:
- 63
- Gaps:
- 3411
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTGAGGCGAAGCTTCGGAGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGCCGCTCTAGCGGCCGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTGAACTATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGAAAAGACATCACCAGATAGAGATAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATCATTATTCAAGATCACGATCAAGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGCCGGAGCAGAAGCAAAGAGAACCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCTTCTTAAAACAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGACAAAGAACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGTAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACAGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCACCTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACAGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGCTTTAGCTAGAAGGTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAACAACAAGAAATAGCTGCAGCTGCAGCTACTGGAGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AACACAAGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAATAGCTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAACAAGGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAATG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCAAGATCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTGAAAATGATCACACTTGTAAAGTTTGGGACTTATAGACTTCTTGTTCTGATGTCACGTCCTTGTTCACCAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGCTAGCACTCTAGCTTGCATGGGTGTTGCATTGACTTTAATTTATTGAAAAATACAAATTTTTGTAAATATC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTAAACCCACTTCCATTAAACTTGACAGGACTATAGAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GATAATATTTTTTAGTTCATGAATTCTACTTTTCAAATATATAAAAGCTGCAGGTGGGGATAAAATCTCATACA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGATTTTTTCGTGTCCGCTGTCTTGTGTACTTTTGTACTTAACCTTGTACAGTTATTTTCATCTCTTGAAACA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGAAAGAAATGTTATGTAGATGTTCTTTAGAAGATCTGGCCATTTGGTACATAATCCAGCACAGATAAGCTGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGTAATGATAATAAAAATGGTTTTCTCAAAACTGGTGTTAATTTAAGTTACCTGGGATGTTTCTTTGAATTTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTTTATAGTTTCTGTAGCATTTGGCAATTGCTGTTAGAAAACACTAGCTAGAAATCCCCTCCCCACCACCCTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTAAGGCCAGTTAACTATACTACAGTCAATACCGTGGTGAGCAAAAATGTAAAAGGTGGAAGGAGAAAACTTAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAAAATAGTATGTTTTCCTATTATAAGGGACAGACTTGGTATTCAGTATTTGTCAAATATTACATGTGTTATTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGGAGATAGATTAATGCATTAAAGGGATGTAAGCACTTTTATTTTAATAAAGTGCCTTATAACAAGTTCTTTGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATGCTTTTTGCTCATTATCCCTTTGAAGTCTTCTCCAGCATAGACTATAAAATATTAAAATATTAGAAATTTTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTTGTTTGTTTTTTTGAGACAGGATCTTGCTCTGTTGCCTAAACTGGGTGCAGTGGCACAATCTCGGCTCACTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CCAGAGCCTCTGCCCCCCAGGTTCAAGCAATTCTCCCACCTCCACCTCCCATGTAACTGGGATTACAGGCGTAC 2442
Query 1 ------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACT 38
.||||||||..||||||.||.||||||||||..|||||
Sbjct 2443 CACCGCACCCAGCTAATTTTTGTATTTTTAGTAGAGGTGGGGTTTTACCATGTTGGCCAGGCTGGTCCTGAACT 2516
Query 39 CCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------------------------------------- 72
||||||||||||||||||.|||.|||||||||||
Sbjct 2517 CCTGACCTCAGGTGATCCACCCTCCTCAGCCTCCCAAAGTGCCGGGATTATAGGCGTGAGCCACTGCAGCCAGC 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 CTAGAAAATGTTTTGTTACTAGATTGAACATAAATCTGGAGCCAAGGGGTGGGGGGGGCCTGCAAAACTTGAAG 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TTAATTTACTTCAGTTACAGCAAAGTAATAAGGTTTGGCTTTCCTTTGAAAAATCCTTTGGAAAACATCACAGA 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 ATGAGAGCACATTACAATCAGGGAAGACTACAGGAATAAGATTGACAGCCTTATTTTAAAAGCTGGAATTAAGT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 CTTGCCAACTTGCTCATTAGGTATTTTTTTTATACATGAAAATGAAGTAATGGGGTGTTTTCTTTTTTTTTGCT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TTCTGTCCTAGGCTGGAGTGCAGTGCATTGCAGCAGGCTCCCCCAGGCTCAAGCAGTCCTCCCACCTCAGCCTC 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 TTGAGTACCTGGGACCACAGGTGCTCACCAACACACCTAGCTTGTTTTTAATTTTTTATAAAGACAAGGTCTTG 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 TTACGTTGCCCAGGTTGGTCTTGAATTCCTGGCCTCAAGCAATCCTCCCACCTCAGGGCTCCCAAAGTGATGGG 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 GTTACAGGTGTGATCCACTTCACCTAGCCAGATTGTAAGATTTTTAATGTACTTTAATAAACCTTTCATTTTCC 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CAGAGCACAGAAATTCTATGGCAAAATGGCTTTTCACCGTGTTTCAGTGACAAATCTAAGCCTTCTAAGGAAAT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 GACACTATGGATCCTTCATTTCGTGATCATCAACATTTTTCAATTAAGCTCTGCCTTTTTAAATCAATCTTATT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 AAAAATGTTCATGACCTTCTAAGGCAGTGTGGACGCAAAAGCTTCCTGTGTGTCTACAGTTATTTTAGGAGCTG 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 ACCATACATGATGAGTGATACAGCCTGTACTTTGCTCATCTAGAGCAGCACTGTCCAATAAAATATGTGTGTAT 3478
Query 73 ----- 72
Sbjct 3479 ATGTA 3483
