Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_037928.1
- Aligned Length:
- 6285
- Identities:
- 68
- Gaps:
- 6213
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCGCGATCGCTGCTTTCAGCTGGGCAACAGCACAGGGCGGTCCTGCGCATCCGGGGGGCTGCGCTCCCAGACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTGGCTGGGGAGTAGGTTGCAGGGGTGTCACTGTGTCAGGGGAGGAGGAGGAGGAGGAGGAAGAAGAGGTAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCAAGGTCGCGGTCTGAGGTTCCGGTGCTCGCCGCCGCCCAGCTCCCAGCCGAGGCTTTCTCAACCGCGTCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TAAAAGGCCGCCCCGACCCGCCCCCGCGCCCCGCAGCCCTGCCGGACACCCCGGGCTGCAGCTGAGCGGGCGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACGGGCCGAGGCGGGCGCCGGGCGCGCAGGGACCGAGGGACCGAGTGCTCCCCATGAGCGCACGTGGGCCGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGTCCGCAAGCCCGGCTGAGAGCGCGCCATGGGGCAGGCGGGCTGCAAGGGGCTCTGCCTGTCGCTGTTCGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAAGACCGAGAAGTATGTCATCGCCAAGAACAAGAAGGTGGGCCTGCTGTACCGGCTGCTGCAGGCCTCCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGGCGTACCTGGTCGTATGGGTGTTCCTGATAAAGAAGGGTTACCAAGACGTCGACACCTCCCTGCAGAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGTCATCACCAAAGTCAAGGGCGTGGCCTTCACCAACACCTCGGATCTTGGGCAGCGGATCTGGGATGTCGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACTACGTCATTCCAGCCCAGGGAGAGAACGTCTTTTTTGTGGTCACCAACCTGATTGTGACCCCCAACCAGCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAGAACGTCTGTGCTGAGAATGAAGGCATTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCACGCTGGGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGCGGTTACAGCTGGAAACGGAGTGAAGACCGGCCGCTGCCTGCGGAGAGAGAACTTGGCCAGGGGCACCTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGATCTTTGCCTGGTGCCCGTTGGAGACAAGCTCCAGGCCGGAGGAGCCATTCCTGAAGGAGGCCGAAGACTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACCATTTTCATAAAGAACCACATCCGTTTCCCCAAATTCAACTTCTCCAAAAGCAATGTGATGGACGTCAAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACAGATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAACCACTACTGCCCCATCTTCCGACTGGGCTCCGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATCCGCTGGGCCGGGAGCGACTTCCAGGATATAGCCCTGGAGGGTGGCGTGATAGGAATTAATATTGAATGGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTGTGATCTTGATAAAGCTGCCTCTGAGTGCCACCCTCACTATTCTTTTAGCCGTCTGGACAATAAACTTTCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTCTGTCTCCTCCGGGTACAACTTCAGATTTGCCAGATATTACCGAGACGCAGCCGGGGTGGAGTTCCGCACC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGATGAAAGCCTACGGGATCCGCTTTGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCTGCGACCTGGTACT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATCTACCTCATCAAAAAGAGAGAGTTTTACCGTGACAAGAAGTACGAGGAAGTGAGGGGCCTAGAAGACAGTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCCAGGAGGCCGAGGACGAGGCATCGGGGCTGGGGCTATCTGAGCAGCTCACATCTGGGCCAGGGCTGCTGGGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATGCCGGAGCAGCAGGAGCTGCAGGAGCCACCCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGTGTGCCCACAGCTCCTGGAGCCCCACAGGCTGAGGACTCCCTCTGCTTCTCCCTTACACCAGGAATGAACCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTCCTTCCCACTCAGAGGAGGTTCTGAGAGGACTGAGGTGGGCAAACCACTGAGGATCTTCAGTGGGGGCAGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAAGGGCTCACTGAGATGGGGGGCAACGCTATGGCCTCAGCTTCTCCTTGGCGTCGTGTGCATGTGTTCCTGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCCGAAACGGAATTTAACAGGTCTGGGTCCCAGATCCATTTCCATGACTGGCCATGGGCTATCTATGATCTGTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAAAGGGGACTTGGATTCAAGCTCTCAGATCCCCTTCCAATCTAAAACAGATTCTTTTTTTAAAAAAAATCCAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATGTGATTACGTCACTTCAGACTAAAAACTTCCAAAGGCTTCCCCCATTTGCTCTGAGGATCAAGGCCAGGGCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATGGGAGCTCACTGCAGCCTCAACCTCCTGGGCTCAAGTGATCTTGATCTTCCCATTCCAGCCTCCTGAGTAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTGGACTACAGGCGCATGTCCCCACACCCATTACTGCCCTCCATGATCTGGTCTGGGTCTACCCTGTGGCCTCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCTCTCACTCTCTAAATACAGTCACATTCCTTCCTGCCCAATGGCCTGGAAACATGCGCTTTCCTGAAGGTAAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCCTTCCCCACACTTGCCTATGTTATTCAACTTTTGGGTTTCAGATGTAATGTTATTTCCTCAGAGAAGACTTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTTGACCTCCATATACCCCAACTTGGGCTAGGTCTGCTATGTCCTCTTCATAGTACTCACCATGATTTAAGTAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTCTGAAGTTAGGTGATGCTGGTTTCCCCAGTTAACCATAAATCCAATGAGCACCATCATTTTCATTACTGTAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTCTTTTTTTTTTAGACAGGGTCTCGCTGTTGCCTAGGTTGGAGTGTAGTGGCAAAATCGTGGCTTACTGTGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCTCAACCTCCCGGGCCCAGGTGATCCTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GCCACCACATCTGGCTAATTAAATGTTTTTTTGTAGAGATGGGCATCTCACTATGTTGCCCAGGCTGGTCTTGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TCTCCTGGGCTCAAGCCTTGGCCTCCCAAAGTGCTGAGATCACAGCAGGAGCCACTACACTCAGGCAATTACCG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCATTCTAATGCAATATTTATTCCTCAATTAAACAAATGCATTTTATTCTTTTTTTTTTGAGAGGGAGTTTCGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCTTGTTGCCCAGGCCGGAGTGCAATGGCATGATCTCGGCTCACCGCAACCTCTGCCTCCCAGGTTCAAGAGAT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCTCCTGCCTCAGCCTTCCTAGTAGCTGGGATTACAGGCCTGTGCCACCACACCCGGCTAATTTTGTATTTTTA 3034
Query 1 ------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGC 68
|||||||||||||||||.||||||||||||||.||||||||||||||||||||||.|||||||||.||
Sbjct 3035 GTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCACCTCGGC 3108
Query 69 CTCC---------------------------------------------------------------------- 72
||||
Sbjct 3109 CTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCTCGGCCACAAATGCGTTTTATTCTAAAATAACCCT 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CCTGACAAGAAAGGATCATGGATTAACACATGGAGGTGTTTACACCCTAAACCTGCCCAAAGTTCAACTTCAAT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 GTCCAAACAATTTTTGTGTTTTTTTTGAGATGGAATCTTGCTGTCACCCAGGCTGGAGTGCAGTGGTATGATCT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TGGCTCACTGCAACCTCCACCTCCAGGGTTCAAGCGATTCTCCTACCTCAGCCACCCAAGTAGCTGGGATTACA 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 GGTGCCCACCACCACGCCTGGCTAATTTTTGCATCTTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAG 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GCTTGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCGTCGGACTCCCAAAGTGCTAGGATTACAGGCGTGA 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 GCCACTGTGCCCAGCCTAAATGTCCAAACAATGTTTAATCTTCCCTAGACATATTCTAAAAAATACAGCTTGAC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TTTATTTTTTCTTATGGAAAGGACTGTCACTAAATGAAATGGAACTAAAATGACACCATATATACCTGAAAGTA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 GTGGTTAGTGGGAGGGAACGCTGGCCTGTGAAAGGTACACCCAGCAAACATATCAAGAGCAAATTAAGAGACCT 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 GCATTTGAATCCTGGCTCTGTCTCTTCCTAGCTGTATCTCCTCTGGGAGAAGTATTTAACCTCTCTGAGCCTCA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 GGTTCCTTACGAGGGAGCTAACAATAACATCTACCCTGTAAGGTTATTGCTAAAATTAAATGAGAGGATCGGTG 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 TAGAGTAGAAGTCACAATGCCAGCATATAGGGAACTCTTTTTTTTTTTTTTTTCCCTGAGAGACAGACGGAGTC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 TTGCTCCATCACCCAGGCTGGAATGCAGTGGCACGATCTCGGCTCGCTGCAACCTCTGCCTCCAGGGTTCAAGC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 GATTCTCTTTCCTCAGCCTCCCGAGTACCTGGCATTGCAGGCGCGCGCCACCACACCCGGCTAATATTTATATT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 TTTAGTAGAGACGGAGTTTTGCCATGTTGGCCAGGTTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCACCT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CGGCCTCCCAAAGTGCTGGGATTACAGACATGAGCCACCGTGCCCGGCCCAGGGAGCTCTTAATACATATTAAC 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TGTTACTGCTTCTTAGGATGTTAATAAGTTCTTTCCTTATGTAGGCCCTTAGGGCCCGTTTCTGAATGGCCTAT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 GTGTAAATACAAGGACTTAACACAAGGCTATGGCCCATTCCTTGCTCTCCAGGAGTCAAATCTCGGCGATTTTG 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 CATCAGTGGCAGCCTAAGCGTTACAGCAGGAAAGAACTCCACAAAGTGTCTCACGCTTCATTTAATCTGAAGAA 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TATTACAGGCTCTCCGTCTTCAGATATAAATTATTTATAACGTTACAGAACAAGCAGCGAATTCAACCACTTAA 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GAACTAAGGAAGTCTACATGGTGTTAATTGCTGGCCACAGTCCTCCCGATCTGGTTTTTTAAAAAAGTCCCCCG 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 GGCCCCCATTTCAGTAGACGTGCACCATGCCGTAGAGGAACGTCCAGAACAGGACGTAGGTGAAGAGGCCCCCG 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 ATGAGGCCTCCTGTAAAGAGAGGTCTCCGTGATTTGAAATATTTGTTCCACCTCCTTCCCGCCTTGAGAATGAG 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 GAGCAGGGAGAGCAGGACGGAGGCGAGCAGGTAGAAGATGAAGCCGTAGAGGCCGGTGAGGCCGAGGATGCCGG 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 CCGTGGCCCCCGACAGCGCTGACACCGAGGTCCGGCAATAATCCAGGACGGCGGCGTTGCCCCGCACGGCCGCC 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 TCGCTGATGAACGGCGGCCCTTCCCGCTTGGCCACCACCGCGGCCATCGCACCAGCCCGGGCTCGGCCTCTCGC 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 TTTCTCGCGGAACAACGCGGAGCTGCGGAGAAAACCAAGTTACAAGTGGCGCCCGGAGCTCGCAAAGAGTTGAA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 ATTCACAAGCTGCGTCAAGGTGAGAACTTAATCCTGGGTTTCAGCATTGGAGGTGGAATCGACCAGGATCCTTC 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 CCAGAATCCCTTCTCTGAAGACAAGACGGACAAGGGTATTTATGTCACACGGGTGTCTGAAGGAGGCCCTGCTG 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 AAATCGCTGGGCTGCAGATTGGAGACAAGATCATGCAGGTGAACGGCTGGGACATGACCATGGTCACACACGAC 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 CAGGCCCGCAAGCGGCTCACCAAGCGCTCGGAGGAGGTGGTGCGTCTGCTGGTGACGCGGCAGTCGCTGCAGAA 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 GGCCGTGCAGCAGTCCATGCTGTCCTAGCAGCCACCACCATCTGCGACTCCTGCCTGCCGCCTCTCTGTACAGT 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 AACGCCACTTCCACACTCTGTCCCCATCTGGCTTCTGCTGACCGCTGGGCCCCAGCTCAGAAGGGCTATAGCTG 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 GTCCCAGAGGCCTGGCCTGGCCTTCCTTCCCTTCTCCCATCCCTGGCCTGGGGCCTCTGGGACCGGCTTTCTCT 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 CCTGGACACCGAGGATTGGAAATAAGGGCCTGGAGCTGAGTAGTAGCCAGTCTGCTGTGACCACAGGCTCAGGT 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 CCGACCCTGCTGCTTGGCCACAGCAGTGGCTGGGCAAGTGGGAACCACTATCTCTTGGGAGCCCCCAAAAGCTG 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 GGAAATGCTGGAGGAACCAGGCCTTTCCCGCTTTTGCCTGGCTGCAGGGTTCGGCTCCGCCCCTGCCCCCCAGC 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 CCTCGTGTGTCCACACCGCAGTGCCTCTGCCCCTCGGGGGACTGGACACACATCCTGCCAGAGGCGCTACGAAG 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 CTTTGCCCAGATGAAGCCAGGTGGGCTCCGCGTTCACTCCCACTCTCCCGAGGGGTGCTGGCCTCCCCAGGGTT 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 TGCCTTCTTACGGATTTAGACGAGGTTCGAGGCTCACCTATCAGGGCAGCTCTCAGGATTGTCATTTTCCTCTT 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 TGCCTGTGGGTTTAACTTTTGTATTTTTTTAATCACAAGTTTGATACAAAATGTTTTTATCGTACTCTTTGGAG 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 ATGCCCATTCTACTTTTGAATTTAGCTTTTACTAATTCGCATCTGGAAGCTCAGCAAGTGCACAAGCCTTACTT 6216
Query 73 --------------------------------------------------------------------- 72
Sbjct 6217 TGGTTACCGTGGAAACCACTGCCGCCCCTCCCCGATGTGGTGCGCTCAATAAAAATGCTGGAATTCACA 6285
