Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
NR_038370.2
Aligned Length:
2744
Identities:
63
Gaps:
2672

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCGCCGCCGCTGCTGCTGCACTGACGGCGGGTGCCCGCGCCTCAGAGTTACTGATTTATTCTTGAGATTCCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TACTCTCGTTATCTGACCTCATGGATGAACTTCAGGATGTTCAGCTCACAGAGATCAAACCACTTCTAAATGAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGAATGGTACAAGAAACTTCCAGGACTTTGACTGTCAGGTATCAGTACCCCACAATGGATGAGCTGGCTGAAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGCTGCCTCCTGTTCTTACCCACCTAAGCCTGAAAAGCATCATTGGAATTGGAGTTGGAGCTGGAGCTTACATC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCAGCAGATTTGCACTCAACCATCCAGAGCTTGTGGAAGGCCTTGTGCTCATTAATGTTGACCCTTGCGCTAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGGCTGGATTGACTGGGCAGCTTCCAAACTCTCTGGCCTGACAACCAATGTTGTGGACATTATTTTGGCTCATC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACTTTGGGCAGGAAGAGTTACAGGCCAACCTGGACCTGATCCAAACCTACAGAATGCATATTGCCCAAGACATC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AACCAAGACAACCTGCAGCTCTTCTTGAATTCCTACAATGGACGCAGAGACCTGGAGATCGAAAGACCCATACT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGGCCAAAATGATAACAAATCAAAAACATTAAAGTGTTCTACTTTACTGGTGGTAGGGGACAATTCGCCTGCAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTGAGGCTGTGGTCGAATGCAATTCCCGCCTGAACCCTATAAATACAACTTTGCTAAAGATGGCGGACTGTGGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGACTGCCCCAGGTAGTTCAGCCTGGGAAGCTCACCGAGGCCTTCAAGTACTTTTTGCAGGGAATGGGCTACAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACCATCTGCCAGCATGACTCGGCTCGCCCGATCACGAACCCACTCAACCTCGAGTAGCCTCGGCTCTGGAGAAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTCCCTTCAGCCGGTCTGTCACCAGCAATCAGTCAGATGGAACTCAAGAATCCTGTGAGTCCCCTGATGTCCTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GACAGACACCAGACCATGGAGGTGTCCTGCTAAGCAGATGCTCCTCCCCTGGACCATTGCAAGTCCATCCTTCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AATGACCACTCCATAATATAACATTTCATCCAGTAAACTGGCCTCTACTATCTTTAACTCATGCATGGCCACTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AACCTCTCTCTAGTAGCCTGGATTTATCATTCTCTCTGCCTGCCCACCCCCTTTTTTGTATAGCCCAAGAACCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTCCATGCCATACTGTAACATTCCAACATCTTTAGCTGATCAGATCTCTCCATATCCTCTCTTGCCAGCTTTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCCCGTGCTCCCCCAACTATGTATCAGATAAGATTCTTTGATCCCGACTCTGTGTGTGCGAGCACGCGTGTCTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGTTTGTGTGTGCATAGTTCTGTGGTTTTAGACACGCTTTCTTGTAGTGCTTCTGCAAAAAACAAAAAAGGGAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTATTTTGCATTCTCAATGGTGTTTTTAAGGGAATTAGGCAGAACAGATTTCTAGGTTGGGTAGGCCACTGCAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCTCTTTTGTTTGCAAATTGGTCAACAAAATTTGCAAAGTGATTTCAGGAGAGAGCAGCTTTGAGGAATGTGGA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AAATCATAATTGCCGTCTGGACCATTGATTGATTGTGACCAGTAGCAGAAGGGTGCCTGTTACATAGAGAGGCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CCTTCTGTCCAAATGAATTTCTGTATACTCTTCTATAAATAAAAGGGAGGAATATATTCTGCTGGAAGCCCATG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AACCATCGCTGAGGTTCTGATACAACATAGAGTTTTTTCCAAGGAGTGAATGTGGTTTAATTACTGGACTCTCT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TAGCACAGGAAGGTGGAAACAAAATGCCAGGCCTCTGCTCTGAAGAGCAAAACTGCTGTCGCTGCAGTATCTGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TACCAGACATCCACATATCCACAAGAAGTGCCTCTTAGGTCTGTGACAGAGAGTGTGTCTCCATTCCTCAGTTC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCAGAAAGGGGAGAGGTTTGGCCTAAAAAGCATGTAGATGGGGGAGAAATGGGTGGGGGGAGAGGAACAGCCAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TAACACAGTATCATGTTTAACAAGTATAGCCTTGATTTCAGTAGATGTAATGGAAGCCAAATTAAATTGATACA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GAACCCATTTCTCAGAGTCTTTTTTTTTTTTTGAGACAGAGTCTCGCTGTTACCCAGGCTGGAGTGCAATGGCG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CAAACTTGGCTCACTGCAACCTCTGCCCCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAG  2220

Query    1  ---------------------------------------------------ATGGGGTTTCTCCATGTCGGTCA  23
                                                               ||||.|||||.||||||.||.||
Sbjct 2221  ACTACAGGCACCTGCCACCATACCCAGCTAAGTTATGTATTTTTAGTAGAGATGGAGTTTCACCATGTTGGCCA  2294

Query   24  GGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-------------------------  72
            |||||||||..||||||||||||||||||||||.||..|||||||||||                         
Sbjct 2295  GGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGA  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  GTCATTGCTCCCAGCCATTAGAAAGATTGTTAATCCTATGAACTCCCTTTTGTAGGAGAGAAAGGGCCAATCTG  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  TAGGGGTAGCCCTGTCCAGGTAAAGTTGTTTTCAGCCTCATGTCTACTGTTAGGTGAGGGAGTCACAGCCAGAC  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  AGAGAGTATTGCTGGAGGGTGAGAGAATTGTGGAGACCAACTACCACATAGCAAGAGCCCAGCTCTTGGGAGCA  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  TTGAGATGTAAGCTCAGGGTTACACAGTTCCAAATCTTGGGAAGGGGCTTTTCAGACAGACTGTTTGCTTTCTG  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  CTGAGATAAGGAATGCATCACTCTGCCAGAGTATGACTTTTTACAGATTATTAAATAAAGCTGCATATGTCTCA  2738

Query   73  ------  72
                  
Sbjct 2739  TTGTTA  2744

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.