Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_045999.2
- Aligned Length:
- 3278
- Identities:
- 65
- Gaps:
- 3206
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTGACGCTGTGGCCCGGAAGTGGAGCGGCTGTCGCAGTGCGGCTCCGGCAGTGGCAGCGGAGGCCTGTGTTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCCTTCGGCAAGCGACTGAGATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGGAAACCCAGAAGTTCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAACAAGTCCATGCTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGCCCTGAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATACCAAGAGATAACAAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAAATGGAGCAGGCTGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAACCACAATCATGAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGCTCATAATCCCATGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAGAATGGGAAGAAGGAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGATGATTTGGCTCTGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATATATCCACCTATGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTGTTTTAAAGAAGGCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGAAATTACAAAAGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTACTTATTAATGCCATT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATCATTGCATGAATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTATGACTTTTCAGGCTCATTTGTAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTCTTCCCCTCTCATCGTCATGGTCAGGCTCTGATACCTGCTTTTAAAATGGAGCTAGAATGCTTGCTGGATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAAAGGGAGTGCCTATCTATATTTAGCAAGAGACACTATTACCAAAGATTGTTGGTTAGGCCAGATTGACACCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTTATAAACCATATGCGTATATTTTTCTGTGCTATATATGAAAAATAATTGCATGATTTCTCATTCCTGAGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTTCTCAGAGATTCCTAGGAAAGCTGCCTTATTCTCTTTTTGCAGTAAAGTATGTTGTTTTCATTGTAAAGAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTTGATGGTCTCAATAAAATGCTAACTTGCCAGTGATTAAATGAGTGCCCTTCCAAAGTTTCTTTTTACCAGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATACAGTGGATTGAGACTAGAACATTGCTTTCATTTGGGTTTGTAGGTTTAAAAATCTGATTCTAATCAGAAGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATATTTAGAACAAAACACTTTATTTATAAAAGATGACTCCAAAATTCATCTTAGTATTTCACCATGTTATATAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TATTATCAGCAAGTCCTTCTGAATATTATCACAGATTACTCCATGTCTCTAAAATATATTGGCATTGAGCTCAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGTTAGGTTTGCCCACCTTATTGAACAGATTTATTTTCCTTATACATACTTGTGTTGTCCTTGGTTACGTGTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCCCAAATGTAAATACCAAATTTTTATAAATCAAAAATTTTTTAGTGTGTAAGAGATTTTATGTAATTTTAAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCCTTTTCAGTTCATCCTTTTGCAAAACCATCACCACTTAATTATACTTTTGCATCAGTCTAGAAGACTGCAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATTGGAAAGCAGTGTAAATCTATAATGATGTATATTCTGGTGAGCTGAATAGGGCATTATGCATGTCCTACAGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCTCCGCCACCTCTCATGCCCATCATCTTCCTTTTGTAGGTGTAATTCATAACATATGCCTTTCTGCTGTCTTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGGTATAATCAGCAACAGCAGTCATTCTTTGAGTGACTAATGTATACTTGGGGTTGGGGTTGAAATTCCTTAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCAAATGAGTTTTAGCTTACTGTTTTGAAGTGCCATTTTGTATTGTTAACAAGTGTCATGAAGGGAAGGAACTA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAATCAAACTGACAGAGTGTCAAGGCAACAAAATAACATAAACAAAATAATAACATTGTACAACAGTCTAGTTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTTTATCCTTTCATATAGAGCCTATTTTTTATATACTTTTATATTTCTCTACTGGACCAAATTCATGTTATTAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CATCAGACTTTAATTGTGGGATACTTAATGAATATAGAACTCTAATATAAAGACTTACCTCTAGCTGAATTATT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTCTCAGGTCCTGTATTGTATAACTTCGTTCAGTCATGTTTGGATCTTTAAGGATAATGATCAGGGAAAGCACT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GATCAATGTAATTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCCCCAAGCTGGAGTGCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTGGCACACTCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCTCAAGCAATTCTCTGGCTTCAGCCTCTCAAG 2516
Query 1 -----------------------------------------------------------ATGGGGTTTCTCCAT 15
||||||||||.||||
Sbjct 2517 TAGCTGGGACTACAGATGCACACCACCATGTCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCAT 2590
Query 16 GTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC----------------- 72
||.||.|||||||||||..|||||||||||||||||||||.||||||.|||||||||
Sbjct 2591 GTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACGTCAGCCTCCCAAAGTGCTGGGATTAC 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 AGATGTGAGCCACCGAGCCCAGCTTGATCAATGTAATTTTAAGATTACCTAAAAATTCCATTTTGGGATAATAT 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 CCCACTTCATCAGAAATATTAGAATGATTTAAGTGTTAGGTCCTTTCCCTTATCTGTAAGTTAATGAATGTATT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 AATGAGCAGTAAAATGGTTGCAAAAAACCTGAACCTGAACAATCTGAATGTACTCCTTAAAGGTATCTGAGCAC 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 CTTTTCAACCTGAATGACTACTCATTTATCTGATAAAGTGATGTAGTTTGGATATTCAACCCTGCAAACCTCAT 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 GCTGAAATTGGATTCCCAGTGTTGGAGGTGGGGCCTAATGGGAGGTGTTTGGATCCCTCATGAATGGCTTCGTT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 CCATTGGTGGGGTAATGAGTAAGTTCTCGCTCTATATGTCCCTCCCCCACCCCAGAGCTGGCTGTTAAAACGAG 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 GCTGGCACCTGGCACTTACCCCTACCCCTCAACCCATTCTTGCCCTGTGATCTCTGCTCACGTTGCCTCCCTTC 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 ATCTTCCTGCATAAGTGGAAGCAGCCTGAAGCCCTCACTGTTTCTTGTACAGCCTGCAGAGCCGTGAGCCAAAT 3256
Query 73 ---------------------- 72
Sbjct 3257 AAAGCTCTTTTCTTTTAAACTA 3278
