Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
NR_048543.1
Aligned Length:
1854
Identities:
63
Gaps:
1782

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCCCAGGACATGCTCATAAATAACCATCAGCACTACAAGAAAGACGTACCAAATGTGATTTGGAGGCGCAAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCACAGGAATGAAGGACAAAGGACATCAAGGGCCCTGCTGGACTTGGAACCCAGGCCTGCTGGAGCAGAGATC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACATCACATTGCCAAGTTCATTATTCAGATTCACAATTGGGATCACACAACTAAGGCACCTGCTGTCCTGTGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTGGCACACTTAACTTGGAGGCCAGCCTCTTACGTAAGGTGCAGAAATCTACCAGGATGACTCGAGGAAGACAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCAACTTGGAAGCCCCAAAGGCAATGGTTGCTCCAGCTCATGCCAGCCTGTAAGAATCAATTGGGGCATCTCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCACAACACTGTGACAAAAGATGGCAAGTTGGTAGCTTGAAACTGGCCCTGATGGGAGTATGTACATCACGGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATTGGCAAATGCTAGAAATCAGGACCCCCCTCCAAAGCTAATTACATATCTACCATGAGACCACTGCCTAAAGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCAGGATGTCCCTATGTTGCCCAGGCTGGTCTCGAACTACTGGGCTCACACAATCCTATCATTTTGGCCTCCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAAGTGCTGGAATTACAGGTGAGAACCACTGTGCCTGGCCAGGGTCTATATCTCAAAGAGTAGTGACAGATTCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATAGGCATCTAAGCCAGCTCTTATCTTTTATCACCTTGGGTGTCAGGAAGCACAGAATGAGATATGGTAGGGAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACAGTGAAATGCAGCCCCAATGGGTCTCCAGCCAGCAGCCATGGTACAGATGTGTTAGCTGGGAGACACCTGTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCTGCAGCTGGCTGAGTGCAGACTCACTTCTCAAAGTAGAGACCCATATTTCTGATTCCATACTATCTTTTCTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCTTTTTTTTTGAGACAGGGTCCCACTCTGTCACCCAGGCTAGAGTACAGTGGTGTGATCTCAGCTCACTGCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACCTCTGCCTCCCAGGTTCAAGCAATTCTGGTGCTTCAGCCACCCAAGTAGCTGGGATTACAGGCACATGCCAC  1036

Query    1  ---------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCT  41
                                             ||||||||||.||||||.||.|||||||||||.||||||||
Sbjct 1037  CACACCCAACTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCT  1110

Query   42  GACCTCAGGTGATCCGCCCACCTCAGCCTCC-------------------------------------------  72
            ||||||||.|||||.|||...||||||||||                                           
Sbjct 1111  GACCTCAGATGATCTGCCTGTCTCAGCCTCCCAAAGTGCTGGGATTACAAACATGAGCCATTGCACCTGGCCTC  1184

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1185  CACACTATCTTTTCTCAAAGAAGAAATGTGTATTTGCAAATTTTGCAATTATAATATGATGTTACCAGGAGGCT  1258

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1259  GGGAGGTGAGGGGTTATAGAATAAAAGTCACTAGGTAATATCTAGAACTGGTGAATCAAAAGACAGCAGTATAG  1332

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1333  GCATATACGGCACATGGACAGACATACAGATAGGGATGTCTATGCCAGAGAAACAGCAGGTGGCACAGACTACC  1406

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1407  AGTTGACCCCTGTACCTGCTTCCTCTTCTAACTCAGCAATAGAATGTTGAGTTGGACACATGGCTAGTGTGTTT  1480

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1481  AGCTAACGAAAGCACTGTTCAGCCTCCCTTGCAGCTAGGTGTGGCCATGGAGGATGTGCAGAAGCAACTGCTAG  1554

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1555  GTCACGGCCTCAAAGGGAAGGAGCATGCCCTTCTCCCCACCCTTCCCCACTTCTTACTTCACTGGAACGCAGAT  1628

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1629  CAAGTGTAGACCAACTTAGAAACACAGAGAAGGACAGGACTCTAGAAGGGCAGAGCAGGAAGACAAGACAGAGG  1702

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1703  ATAACTGCCCTAACCACCTCACAAAGTAGACTTTTCACACATGCTCAAGAGTTTCATGTAGGTAGAATAAACTC  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  CTGTTTAAGCCTCTGTCATAGCCACTGAACTTGTATCCTAAGAAACATATACCTAAATAAAAGTGTTTGGTTAA  1850

Query   73  ----  72
                
Sbjct 1851  GGAG  1854