Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_103505.2
- Aligned Length:
- 6097
- Identities:
- 64
- Gaps:
- 6025
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAACCCTCAGGGACCTGGTATAGACGCAGAATCTGTTTCACACAACAACTGCTATTTGAAGGAAAAAAAAAAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAAGCAAATGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACACTTCAGCATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTGCTGCCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGATAGTGGATCGGAAATACAGCATCTGTAAGAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTGCTTCTACCAGAAGAAAGAGGAGGACTGGATCTGCTGCGCCTGCCAGAAGACCAGAACCAGCCGCCGTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTGCGCCCCCCGCGGTGGTCAGAGCGCCAGCCAAGCCACGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGTCCCCGCCCAGAGGTCCGACCACCGCCAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAGCAGCGTCCCCCTCAGAAGTCCAAGCAACAGCCGCGCAGCAGCCCCCTCAGAGGGCCAGGCGCCAGCCGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGGGTCCCCCGTCAAAGCTTCTAGGTTCTGGTAACACCATCTCTTCCCTTTTGTTCCCCAGCCCTAAGATTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGACTCATTGCTTCACAACCCATCTACCCCTGGATGAAGTTATCTGGCTTCAAATATTATGCAGGGGCAAACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGCCACTGAGAGATCTGCTGTCAGTCTGCTTATCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTCCACGGACTCAAGTTTCTTCAATCTGAAGATACATGTCTTTCTCCAGGGACATGTGGAAAAAAAAAAGATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATACAACCATCAAAGTGGCAAAAATAAAAAAAATCAAGTATTGGCAAAGATGTGGGGAAAATTCTCATAAGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACTGATGAGAATTTATAAATTATTATGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAACCTGTGATCAAGCAATAATAATTTTAGGCACCCATCCTAGAGAAAACTTGAATTCATAGAAAAAGTAGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACACGTAAATCTGTTCAAGGAATCATTGTTTGGCATTGAAAATAGGAGAGAGATCATGAGAAATTACCAAAATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCCACCAATAGAATGAGTGAATCACCTGTGGTATATTTATAAATAAAAATATTAAATAGAAGGTAAAACAAATC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGACATACACACATTAGATAGATAAATTTAGAGGACAAAATAAGGAACATGAAAAGCAAATAGTAGATGGCAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTAATATAATATACTATGCATAAATTTTAACAACACACAATATTATATTGCATATTGCCCAATAAGCAGAAGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATAAGGTCTCACACTTTTCTTATAATGCAATAGAATAAAAATGACAACAAAGTAAAAGGGTATCCCAAAAATA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAACTATCCTTTTGGAAAAAAAAAGATTTAAAATAATTCCTGGTTTGAAGAAATAACAAATTAAAAGCTATATA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TAAACGGTTAACAATATTAGGTGGACATATTTGTTTGAAGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATATTCAAGGTTATATGTCTTAGAAAACAAAAATACTTGTTTGGGTTCAGTTTTGGATCTGGGCTTGTTCTTGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGCTTCTGATGATTTCTGACTTGGGGAAAAATGGGGAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGTAATAGGTAGGAAAATGAAGAAGAAAATAGAATGTTGCAGAATGTGGAGGGATGTAAAATGGACAGTACTAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGTAGAGGGGAAGTCAGATTAGAGGAAAGAAAGAGCATCAGGAACAGTCTTGTGCTAGGAGCTGGTGTGGCCAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCTTGAGTGGGCACAACCATTCCTAGCCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGTTTAAGAGGCAAGTAAAAATATAGGGGCAATGTCAGATGAAGTCTTGTTCAGGGTATGGGGCTAGGATGAGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAGAATGCCACAGAGTATGAAGGAAGAGTGATAGATCCAGATGAGATACAGCTCAGAGTGCCACGCCCCCAGAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGAGGAATCAGGCAAGTACTGTCCCAAGGCAGCTGGAGGGTGAGGGCTGAGTGCCCTGGCTTCCTCACTTGGGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGACCATGGGTCTCTGTAGAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAAAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTTTCTCTTGCCTAAATTCAGGTGCTAAATAAACAACAAAATGGTAACCTCTACTATGAAGTGTTTCCAATGAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGGATATCTGAGGCCATTACATTCCTGGGAATAACATGGTGAGGTGCAGGGTGGTGGTGGTGGTGAAACATACG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACAGACCACTGTAAGTGAGAACAAATTACTGGCCCAGCCCAACCCACACCAAATAAGAAATTTAATATCCCTTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGGGCTCTCTCTTCCACATCATCCAGAAGAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCATATTAATTCATGCAAAAAGTTAGATATTAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCCAGAAATGTTAGTAACAAGAAACTACTGAATTCTCTGTTTGTCTGTTGTGGAAATAAAACCTTCTGGGGATG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AATCAAAACTATCTGACAATTACTTGAAATGGGTGAATAGCTAAATGTAATGTGCCTTGGATATTATAACTAAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGGTGCTATAATCCAGTTATATTTTTTATCTTTTAAGGATTGGTTCTGAGGAGCACTACCAGTAAATATTGCAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAATTACATAAAGCTCCAAAAGCTACTCTGTGTAAACTTCTTGAGTGGGAATTCTCAACCATAATATCTGGAAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ATGACTGATAATTCTGGATGTTAACTGATTTTATGTTCTGATGTTTTGACTGGTTTTGGGAAAAATTTTGGGAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAAAGAGTTTTCCTCGTAAATACCCAACAACTGGGTCTCTGGGTAAAAAGGCCTAATTTATAGAGATTGCTAAT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTCCATGGTGTAAATATTTCCACAATGCAGATTCCTTCCTTCCTTTTTTTTTTTTTTTTTTTTGAGATGGAGTT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TCACTCTTGTTACCCAGACTGGAGTGCAAAGGTGCGACCTTGGCTCACTGCAATCTTCACCTCCCGGGTTCAAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCCCACGACCATGCCTGGCTAATTTTGTATT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTTAGTAGAGATAGGGATTCACCATGTTGGCCAGGCTGGTCTCAACCTCTGGACCTCAGGTGATCCACCCGCCT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CGGCCTCCTAAAGTGCTGGAGATTACAGGCATGAGCCACCACGCCCGGACCATGATGCAGATTTCAAGCTATGA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ACATGATTCTCTGGAGTTTACCATTTGTCTTTTAATTGGCAAATTTGATGCAGAATTGGGAAGAGAAGCACACA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCCCTCTGTGAAGCTAG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AGTTTACTACTAAAATTTGTGCTCCATAAATATACAAAGGCACTAGTAAGAGAAAAAATATAAAGAGAATATAA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 ACTAAATTCAAATTAGGGAGCTCAAATGGAGAAAATTGACAGATAATATTTTTGAAACTTTGAAAAGTAGTATT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TGTCTAGATTCACCTTTTATTACCTTTTCCTTTTTTTCTTTTCCTTTTTTTTTTTTTTTTGAGACGGAGTTTCT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CTCTTGTTACCCAGGCTGGAGTGCAATGGCACGCAATCTCAGCTCATTGCAACCTCGGCTCACTGTAACCTTCA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CCTTCCGTGTTCAAATGATTCTCCTGCCTCAGCCTTCCGAGTAGCTGGGATTACAGGCACCCACCACCATGCCC 4218
Query 1 ---------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTC 47
||||||||||.||||||.||.|||||||||||.||||.|||||||||
Sbjct 4219 AGCTAATTCTTTGTATTTTTAGTGGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACCCCTGACCTC 4292
Query 48 AGGTGATCCGCCCACCTCAGCCTCC------------------------------------------------- 72
|||||||||.|||||||..||||||
Sbjct 4293 AGGTGATCCACCCACCTGGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCTGTTATTA 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 TCTTTTATTAAGCAAACAGCGTATCTATGTATCATACTGAGTGTTCTGAGCTGTTAGTTTCTTTGGTGTTCATC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 TAGATGGAAGCTGGGGCTTCCTTCCTTTCAGATATTGGTGCTAACATGAAGCTGACCAAAGAATTGATGGGATC 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TGCACACTGTAAAGCCGGTTTCAGGATGGCTGAGCTGACGGTCAAGAAAGAAGAGAAGATATGAGCCGCCTGCA 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 TTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTGGTATGACAATATATGGCTTTTTGTGATTGTTAACA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 TTAATGAAAACAAGAAAAATTAGTTGCTCAAAAGTTGAAAAATGGATTCATAAACTTTTTATTAGAGTAAGGCA 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 AAAGAACATATTAAAATAGAGGTAAATTAGAAATGTCAATAAGAACCCATGGACATTTTTTATAAGGAGACTTT 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 ATCTGTTCTGTCCCTACAGTGATTTATGCTCTTGGATATTTTTGCTGTCATCCTGACAAATTCTAGTTGGAATA 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 TGGAACAAGCTTATTTGTAGACCTAGTGCCTGTGGCTTCTAAAGCAATTTTCTGAAAAGAGAAACCACTGCCTG 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 TTGGAAGAATAGTTGATTCCATACCTCAAGCTAGGGAAAAAAAATCAGAATTAGTCTGTGAATTCTAGATGTTG 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 AGAGAAAGCAGGGTTTCATTAGGGCATCGGAGAGTCACAAGTCCATAGGATGCAAAAAGGAAGATGAAATAAAA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 TTGCCTGAAAAACGCACCTGAATTTCTGGCATTGTTTACTGAAAAGGCTGTGTATTGATGAACCCCAATTATGT 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 GAGGTCTACATTTAAGAGTTTATAATCAACAGTTTGAAAATGCAGGGTGTTGTTTCTTTCTATAAGGAGACAAA 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 ACAGTCAGAAGGGAGTGTCACAGGACATTATCACAAAATCAAAGTTCTCCATGAAATGTGGTTCATTTGCTAGA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 AAATAATGCAAGCCTATTGGAGAGAATCAGGGCTTCTAGTGATGCTAGGGATGACCTTAAGCATTGTTTGTAAA 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 TCACACTTTTTCCTAGTCTTTCAGCAGCAGCTGCACAGAGTAGGCCTGCTTCTTCCCATGAAAGCCACACTGAG 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 TTTTATCAACTAGTAGTGTGTGGGCACTATTGCAAGTTATGTTGTGTTGTTTATGGCCATTTATCCAACAGTGC 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 TTTCCTCTGTGCGGGGCTCTGCAGCCTCGTTCTATGTTATTTTTATTACCACGTGTCTGTGCGCCTCAGGTGGC 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 AAAGCAGAATCAGCTTCTCTACCCTCAGCAGGGCTCACTATGACTCACTATAAGGGAAGAAAATCTTACAGATG 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 TCAGAAAATGTTAGGTAAGTGGACAGTGATAAACACAAAACAGCAAGTGGTCAGTATCAAAGAGAAAAACAGTA 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 TGTTGGTGAAGGAGAAGTATCAAAGCTAGTTAAAAAAGTAACAGGAGAAATGTAAAGGGACAATACTCCACAAA 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 AATTTAGATTGTAACTGAGCTTCTTCTCCTAAAGAGATTTAAAAATAAAGTATAGGAAATACATGAAGAAACAA 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 AGTAAAATGCCAAGGTGTAAGTTTGACCATGAATATCTAGGGAAAAACATACTTGCACTAAAACAACCAAATAT 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 GCAAAAATCAAGTGGAAAAACAGGTCAAAATAATGCCAGTTGATGTCTGTAAGAACTAAATGTATAATAAAATG 6068
Query 73 ----------------------------- 72
Sbjct 6069 AGCAAAAAAAATGGCCAGTTTAACACCAA 6097
