Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
NR_108047.1
Aligned Length:
5658
Identities:
67
Gaps:
5586

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTTTCCGGCGTTGGAGTTGCAGCTTCACCCTCGCAGATTCGGCTTAGCGAGCGAGTCGGTGCTTCCGCGGATCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAATTATTAGCCGTTTTATTAGAGCCCATTAAACGTTGCATAAACATGGTTCAGAGCTGCCTGGGAGAAGAAAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCAAAGGATGCCACCCTCTCGATTTATCCCACCCTCGGGAGTCTGAAAGCCGACGCCAGGAGAAATCCCGCGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGGCCGCCCGGGATCCTGGTAGAGGCGACGCTGTGTGCGTTTATGGAGCGCTTGCGGTGCGTGGCACTAGGCTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGTGTGGTGGGTGCTGCCGAAAAAAGGGTTCCTCCCATCCATTTGCACGTCACCCTTCCCACCTCCTGCCCAGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGACAGAAGTGAGGACATTCATCGGCCGCATTTTACTAATGGCAAGGAGATAGCGACTGAAGGGCAAGAACCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGGGTTTCCTGTCTTTGATATTTCTCATCTTTGAGAGAAGCCAGTATTTGGAGATGTTTACCCTGCTGTTTTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AAGTTGTCCACTTTACTTGATATTGGGACATATCAAGAGACCACTATATGGTCTTGAGTGTAAACTACAGGTAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATTCCTTCCTGCCATCATCGTGTAGCAATAACGCTATTTCCTCCTGATGATTGGATTCATTTACCCCAACTAAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATGGTGACTCTTCCTTGCCTGCTGGTCTCCTAGCACAAGGACCTTGAACCGGGAAACCTCAGCAAGTTAAAGTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TAAAGGATCTATTATTGTGTCTCTTGATGAAAAGGTTCCTCTCTTGGGAATCAGGACTTCTAATTCACAAAGTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCGGGGATGAGAAGTCCAAACTCCCCACTTGGGTCACTGGGAGTGAGAGTATGTGGTTATATTAATTTCCTATC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACTGCTATGACACTACGAACTTAGTGGTTTCAAACAACACAAATTTATTTTCTTACAGTTCTGGAAGCCTAAAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCAAGATATCAACTGGACTGTTTTTCCTGAAGTCTTCAAGAAAAAGTCTGTTTCCTTGCCTTTTTCAATTTCTA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GAGGCTACCTACATTTCTTGGCTCATGGCCCCTTACTCATATCACCCCATCCTCCTGCTTAAGTCATTGCATCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACTAGGCAAATCTGCCTCTCTCTTGTAAGAATCTTTATGATTATATTGGGCCTATTGGATAGTCCAGGATAATC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCTGTATCTTGAGATCATTAACTTAGTCATATCCACAAAGTCTCTTTTATCTTGAAGGTAAAATATTCATAGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCCAGGATTAGGATCTGAACATATTTGGGGGCCATTATTCAGCCTACTACACAGTAGGAATTCTATTTATATCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTTCATTCCCAAACATGCATGTTATGTATATATGAGACACAGCACCATAAAATGAGTGTTGATTTAGAGTATAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACTGTACCCTGGTGGACAAGGTCATTCCATTTTCACAGGCTATTATCTTCAAGCTTTTGCTTCAGTTTCACCTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAAAAGGGTTTTTCATCATTCCATCAGACCCGCATTTTCTCGGTTATATAGTATGTGATAGGACTAGTGGATCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CATGGTTATGTACCTGCTGATACACCTCCTTTGCTGTAAAGTGCATCCCTAAATCAAAGGCAATATTACACAGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATACATGTTGATGGATCAAATACCTGTAAACCTGTGAGTAGTAGAGCTGGCCAACAACTTATAGGCAAGGAAGT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAAACTCATACATGCAGATGGGCAGTTTCTAGTCAAGGAGAATCACTGCCCATTCTAGGATGGAAGGAATCCAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CATAAATCAATTTGCTGCCCAAGTAGCTGTTTGGTATCCTTGAGGGTTGGTGCTGTATCAGGAACTTGGTGTTT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AACACTGGGGAGTGGCTATTTTGTTGTTGTTGTTGTTGTTGTTTTGTTTTGTTTGAGACGGAGTTTCACTGGTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GCCCAGGCTGGAGTGCCGTGGCGCCATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGGGATTCTCCTG  1998

Query    1  -------------------------------------------------------------------------A  1
                                                                                     |
Sbjct 1999  CCTCAGCCTCGTGAGTAGCTGGGATTACAGGCATGCGCCACCACGGCCAGCTAATTTTGTATTTTTAGTAGAGA  2072

Query    2  TGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---  72
            .|||||||||||||||.||||||||||||||..||||||.|||||||||||||||||||||||||||||||   
Sbjct 2073  CGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCAGACCTCAGGTGATCCGCCCACCTCAGCCTCCCAA  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  AGTGCTGGGATTACAGACAGGAGCCACCGCGCCCAGCCTGGGGAGTGGCTATTGGATAAGTGGAGGCTATCTAT  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  TGGCTTCTTGCTCACTTGCATTCCTGCAAGATGACTACTTTGTCATAAGCCCCCTGTGCCATTCCTGGGGGCGG  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  AGGGAGGGGGCGGTGGAGCCGATGGTTGTAGCTGCTGAAGTTTACTGGCTAAATCTGTCTACTTGGTTATTTAA  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  TGCTGCTTACATGTTGGATTGTCTCTGGCAGATAAAGATTGTGTTATACAATACAAAAAGCCCTCCTTATGTGC  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  CATATCTGATATATTTCTCCTCTGCTTCTCCAGACTTCTTGTCCCTGATATACCAGTCTTATTCCAGACCCCTG  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  ATCAACTAGCCAACTTATTTGCCATGAAAATATGTTCTTAGTTCAAGACACTTTCTTTCCACACACAGTTGATG  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  ACCAGGAATACTGCCCCACATTATGCCTTTTGGGAGGGTTCTCCTTACTGCTGTCTTTTAAGGCCAGTCCTGTG  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  TGGGGCTGTAGGGCAGTAGCAGTCCATTTTTGTTTTGAACCTATATTCCAAGAAACCTCAGTGAATTCAGCTCA  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  GGCTTTTTTGTCCTCCATAAGCTAGACATGAGAGCCTCCCAAGTGGCCATAATTGTGAGCTGAGGAAGGGACAT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  TGGTAAAGAATCAGATATGACATGGGAGCCTGACCACCTGCCTTTGCCCAGCTCATGATGGGCCTCTCTGGCTA  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  CATGGTCACTTGATGTCCATAATCAGTTCTTACCAAGGCACATTAGCATGGATAGAGTTGTTTTTGGGATTTTG  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  CACTGCAGATGGCCCAGCCTTGCCACAGAATGCCAGGAGTCGACCTTGTGATTCTCCCATTGGAGCTTGCCTTC  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  AACTTTCATGGCTTCTTATCACATTTACTCTTGTCCCATAGAATATCCTGAATTGGTCCATGCAACAGGGCTAA  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  ATACACCATACCTGCTAGAGAACTTTTACATGCTATGGATCCCACTGAAAACTGGCAGATTTCTATCTCACCCA  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  GTTTACGAGTCAGAACAGTACTGCCAACTTCTGAATTCCCACAGAAGCCTACACAGCTTGGTGTGCTTCCCTGG  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  TGGCAGAATAATTTTGGTGAAATGAGTGGGTGAGATGCAATAATTTGTCCTTTACTGTGAAGGGGATATCTTGG  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  CATTCAAGCAGCCTACTGGGCCCTAAAAGTTTCACTGAGGTAACAGCTTGCTGGGTCTTAAGGATTATTTCCCA  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  TCCTCCAGTGTACAGTATGCTAGCTGCTTATTATTCACCTTATCCAGCTAGCATGATGTCATCAATGTGGTAGG  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  TCATTGTGACATTATGTGGGATGTTTAGATGGTCTAGATCTCTTCGGATTATGACGCAGTGTGGAAGAGTTAAC  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  ATAACCCTAAGCCAATACTATAAATGGGTACTGCTGTCCTATATAAACACAAACTTAATTCTTGTCCAGCACTC  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  TCAGGACCCAGTTCCATACACATGCTCATGGTTCCTGTTGGTACATGTTGGTTAGATCCTGCATCTCTTTGGTC  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  ATATAAGCCCATTTGGAATTGAAAGTAGACACACAGAATGAGGGCAAAACACCTGCAGAACAGCTGCTTCATCA  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  TGGTGGGCTTTTTTCATATTAGGTTTTGTTACCTTTGAGTTTTTAAATTATGTGTAAAGCTTCGATTAAAAAAA  3848

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3849  TAAAAATTATTAAAAAGAAACTGAGACAGTCTATCCACCTATCTCTATTTACCCAGTGCTGTTGTTGTGTTACA  3922

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3923  TAAAATTCAATTTTAGCTTCATGTTCATGCAATATTTTCGTTTACCCTTGATTCAACCTTGACCTTTAAAAAGC  3996

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3997  CAAAAAGACAAATACCTATTTTGACACTGGTTCTGATCTCTCTGAAATTCTGTGTGACCAATGGTCAAGTAACC  4070

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4071  TTGCAGGTTATTTATCATGTCTAATCTGAAAAAAGTCATTGTATTTACTAATATTTTAATATTCACCTTATAGG  4144

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4145  TAAGCATTCTAAACATGATTGTGGCAAGAAATTCTTATATGCTTTACATGTTGAAATTCTGTGTCAAATGAAGT  4218

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4219  ACATATGTATATTATTGCAAGAGTGAATTTCTTCAGTAATGATTGTGACAGCTAGTAAATTTAAGTAGAAAGTA  4292

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4293  ATTATAAACTTCCAAATACTTTTTTTAAATGGGCAAAATATATGAAACAATGGCCCTGAAGGCATTGGACATAG  4366

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4367  GCAGTGAAGGATAGTAATCCATGAGAGATGGAATGCAAACAAGGTGAGCAATACAATTGCTCCAACTTGCTGCC  4440

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4441  TGAAGAAAGGCTTTGGCATGGGGAGAGGGAACCCAGAAGACTCTGTGAGGTGAGGAGATATAAGTGGGAGTCCT  4514

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4515  GAGAGCCCAAGGCAACTAGAGTTCACAGGGTAGAATACTAGAGAGGACAGAGTGACACAGAGAGAACTCCAGAG  4588

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4589  ATCTGCTGACCATTCTCCTGAAGTATTAAGCTAAATAATGATTAGTACATGCATGAGAGGAAATAACCAAAGGC  4662

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4663  TTGGCAAAGAACCATCAGAAAGGATTAAAGAAAACAATACTCAAAGCTCACACAGGATGGTGAATGATTCCTGA  4736

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4737  TCCCGTCAGCAAGAGTGGAAAAGATCCTAATTCACAAGGCACCAGTTAGAGTACTAAGAAAGGTCTTGCTTCAA  4810

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4811  TAGCGGGAAAAATTAACCCTCGACTAAATGCTCTAGAATAACCTAACAAAGCTTAAAAGAGAGACCCAAAAACA  4884

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4885  TTCAAACTGTGTCCAAATAACTTAATCATACTCCAGAAGAAAGTTCAAACTGTTTTAGGGATATGAAAATAATC  4958

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4959  TACAAAGTAAAATTCACAATGGCTGGCATCCAATCAAAAATTACCAGGCATGCAACAGAAAAATACAACCCATA  5032

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5033  ATAAGAAAAATAAAACATTCTGGGCTAGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGG  5106

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5107  TAGGTGGATGACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCTACTAAAAAT  5180

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5181  ACAAAAATTAGCAGGGAGTGGTGGTGCTCACCTGTAGTCCCAGCTATTCAGGAGGCTAAGGCAGGAGAATTGCT  5254

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5255  TGAACCCAGGAGGCAGAGGTTGCAGTGAGATTGTGCCAATGCACTCCAGCCTGGGCAACAGAGCAAGACTCCAT  5328

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5329  CTCAAAACAAACAAAAAATAAAACATTCTGTCAAAACTGACTCAGAAATTACAGATGATGAAGATTATTAGACA  5402

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5403  AGGACATTAAAACAGTTATTATAATTATATTCCATGTATTCAAGAAACCAGAGGAAAGACTGAAGATATTACAG  5476

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5477  ACAATGAAGGTATAAAAAGACCCGTATCAAACTTCTAGAGATGAAAACTCCAATGTCTGAGATGAAAAATATGT  5550

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5551  TAGATGAGATTAATGGCAGATTAGATATTGCAGAAAGAAAGATCAGTGAACTTGAAGATGCAGCAGTAGAACCT  5624

Query   73  ----------------------------------  72
                                              
Sbjct 5625  CCCTGAAACAGAGAGAAAAAAAAAAAAAAAAAAA  5658

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