Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
NR_110090.1
Aligned Length:
2796
Identities:
67
Gaps:
2724

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCATAAGATCACCCAACTATGGATTCCATTTGGAACTGCGTGTACATGCATGACTGAGTTAGCTGTGGACATGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCACACGCCTTCCATACATCTCTGATTATAGAAGATATTTTTTGCCCTCCATTTCCTATATTTACTCTTCCAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGACAGGGACATGGAAAAATCCGTGACCTAGCACTGACCCAGCAGATAAGACTAACCACCATAAGTACAGTTTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGAAAGAAAATGAAGTAGTTAAGGCTAAAGCTTTAACATGGAGTCAAGCGTTTGTAAGAGCATTGCACTCACAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGCTAAAGGTCAAGCCACAGGATGTTGCTGTAGACCTGGATAACAATGGACTGAAGTCAAGGAGTTCATGATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCACCATTCTACAGAAGAGGAAACTGAGGCTGGGAGAAATGAAGGCACTGTCTCCTTGTCCTCCATGTGTCCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGTGGGCACCTTCTGTGTCCCACCAAGCATTCATGTCCATTAACAGAGCAAGTGCCCTGAATTCTTGAGCCCCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACACTGACTGCACACCCAATTGTCCCTTCGAGATTCTTGACTTCATGCAATTCAAGGGAGAAGCCTCCCTCCTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGTGCCCAGGCCCAGATACACTGTGGCCAGAAACAAAACACTGTAGGCTCCTGTCAGCCTGAGGGGAGCATGGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AACTTGCTCCTATGGGCCCCACGCACCCCGTAGGAAATACCTCATCTCCTCATCCTTAGTCCTCAGCACCAAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGAGGTGGGCATGTGCTCCGCTGAGCTGCAGGAGGCCCAGCTCTGCTCCATAGATGCTGCTGAGTGAAGGAGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACAGCACAACATGGGGGGAGAGTCCTAAACGCTTCATGTGTGCTGAGACCTGTCTTTTAGAAACAGGCTTGACA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TATAGTGAACCATCTGCAGAACCTTTCTAATGAGAGGGTAAAGCCAGCCCCTCCTACCCCTACAGGACTTTTTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCATTTGTTTTGTTTTGTTTTGTTTTTGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCAAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTCGGCTCACCGCAACCTCCGCCTTCCAGTTTCAAACGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTA  1110

Query    1  ---------------------------------AT-------------GGGGTTTCTCCATGTCGGTCAGGCTG  28
                                             ||             |||||||||||||||.|||.||||||
Sbjct 1111  CAGGCATGCGCCACCATGCCTGGCTACTTTTTTATTTTTAGTAAAGGCGGGGTTTCTCCATGTTGGTTAGGCTG  1184

Query   29  GTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------  72
            ||||.|||||||||||||||||||||||.||||||||.||||||                              
Sbjct 1185  GTCTTGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCAC  1258

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1259  TGCACCCAGCCTCAGTTTCGTCTTTAATGCTTTTCGCTATAGAACTGAACAATGCCAGAGTCCGGAAAGAGAAG  1332

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1333  GTTGGAGCATTTCTCTACACTTGAAAAACCACATCTGAGTGAGTGTTGCAGAGACAGGGGCTGTAAGTCAGGCT  1406

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1407  GGTGGGGAGGAAATCTTGGCTCCCTGACCTGCTCACCACTCAGATCTCCTCTCTGAGCCTCAGTGTCCTCATCT  1480

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1481  TTAAAGAGGCAACAAATGGCTCCGCCCTCATAGCACTGGTTATAAGCAGACTTTGGCACAACTGCCACTCCCTG  1554

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1555  GCCCCCTTCCCTGCCTCCCTCCTTTCTCATCCAGGTCATCATTTAGGCTGAGAGCATGGCAAAGAGGGGTGAGC  1628

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1629  ACCATACTAGGAGTTAGCATATCTGAGTCACACCTGAGCTACTTTCTGGCTGTGACTGCCTGGGCTGGGGAGGC  1702

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1703  ACCATCTGGAAACTTCGGTGTCTTTGCCTATATTATCTGATCAGGGTAAATCCACTTCCACATCTATGTTCAAG  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  GGTGGTGGGGAGCCCTGTTGCTATGTCATCTAGGAGGGAAATTAGATAATATTCTCATATATGAAAATACACAC  1850

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1851  ACCCTCTGACTTAGCAATGTCACTTCCAGTGGGTGTCTCCCACCTGAGGAGGGTGATACATGTACAAGGCCATC  1924

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1925  CACTGCAGGATTGTTAGTAGCTCAAGTTTGGGAACAACTTACATACCCATCAACAGAATGCTGTGAAATAAATT  1998

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1999  TTGATATTTCCATAAATTGGAGTGTTCTGCAGCTGCTAAAGAGTGGAGCAGTTCTATGTCCTGACGTGGAATCT  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  CGATACGGAATGTTAGGGCTTATGTTTGGAAGAAGTTTTCCAATCACCAATGGGCTTTAGTGTCTGAATGTGAG  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  GTGCATTCTGAACCTTTGGGAAATGGATGAAAAAAGAAATCCTGGCTCCCTGATCCATGGTTCTGTTTGAGGAG  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  CTTTTATTTAGTACCTGTGATGCACCAGGTTCTTCTATGAAGACAGTGTCTAACAAACACTGGGGAAGGAAGGA  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  GCCTGCCTCTATTCGGACCTTGACTCTGGCTTTGATTCCATCAATAACTGGCCATGTGACTGTGGACAAGGCCC  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  CTATCATCTCTTGGCTTAAGTCCCCCATCTGTAAAGGGGAGTTGGGCTGAAAGTCTGAAGGTCTTTCCCGTGCT  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  GAAATTCCAGGATTCAGGAGGTAGGATGAGGATTCTGGGCCTCTGGCTGGAAACCCCAAATAAGTTTTATTGCT  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  GCTTTAAATTGGGCACCCCTGAGCCACCCATACGTATGACCTCTTTTCTGAGGTGAAGGATATTCTGAGATGAC  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  CCAGCTCTGCTCAGAGCCCACAGTGACTGTATGACTCAGTCCTTAAATCACCCAAGGCTTCAAATAGACCCACA  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  GCAAATGCGAGACTTATTGGCATCTCCTCCCACCGGGCCATTAGACTAAACAGTGAATCTGTGCCTCCCAGGAA  2738

Query   73  ----------------------------------------------------------  72
                                                                      
Sbjct 2739  TCTTCCCTGTGTGATGTTTCTGAAGATTAAATAAAGAAAAACACGATTTACACTTTCC  2796

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