Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_120593.2
- Aligned Length:
- 5452
- Identities:
- 65
- Gaps:
- 5380
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCACTCGGCTGTGCGGCGGGGCAGGCATGGGAGCCGCGCGCTCTCTCCCGGCGCCCACACCTGTCTGAGCGGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGCGAGCCGCGGCCCGGGCGGGCTGCTCGGCGCGGATGGCTCCCTAATGAGTAGAATGAGACCTGTGTGCCAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGGCCTAGTCCTCATGCCCCCACAACTGTGAAGCGAGAGGGCTCAACAGTTTCGAATTCAATTCAACCACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCTCCTGAATACCAACTAGGTTCCAGGACCTGGCTAGAAGCAGAGACACCAGGACAGAAAAGACAGTGTTCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTCATGGAGTTCACAGAAGAGTCGAGGAGACACAGCTGGATCCTCCCTGTTTACCCCAGTGGATGCTAAATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTTGGTGAAGAGGAGACATCCCTGCACAAAGCAGAGCTGTGGATTCTCTGACCTCCTTGAAGACTCTCTTCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCTGCAGTGGACATTTGCCATATTTTTATTAATGGGTGTCTGTCATCAAATCTCCCTCTGTAAGGGTTGGTCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGTTGTGGCTTCTCTCGATGTGAGGTCGGACTCACCTTCCATATCAAAAGTGGACAAAATCACACTCACACTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTTGTTCACACATAAACACACAACCCTGGCACAATCTGAGGGTCAGTAACTGACTTTGGCTCAGCCCACCAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGTCTTTCCCTGAAGTGTGAATCTCAGGGAAGCAATACAAAAACAGGCAGGGGGTGGGTGGCTACCTCTGGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAGCTGGAGGTCGTCCTTTCAAAAGCAGGCTGGCGGGCACGCTGACCAAACTACTCCTGCCAAGGAGCCATTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGTGGTTCCTTTGGACTGGACTTCTGACTCTCCCCTAATTTCTACTCATTTCTAAGGTTAATTCTCTTTACTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCAACCACTCCAATACATTTCCTTCCATTTATGTTCTCTAGAGTCTGTTTTCATTGCTGACACCTAAGGTGGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCATAATTATAAGCCAGCGTGATTTCATTTCCTATCTGAAGCCTTCGAAAAAAATGGCTCTCAAGCAGTATCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACACCCAAATCCAAGGCTTTACTTTGGTGGCCATGGAAAGACACCTGAATGGGTGGGCGTGGGAATAGGGTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGAGAAGTAGAAAAGAGGAAGGGAAAAGAGAAAGTACTGCATATTTCATACCTACTATAGTCTAGGACTGAGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TACAGCAATGATCAACATAGGCAGAGGCTCTAACAGATGCCAGGAGCCAGCTAGGCATTTGTCCGGCTATCTTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGATAATATTATAGGGAGGGAGGTGCTCCCATACCCCAAGTGGGAAGAGTGCGGCTCAGTGAGGCTGAGAAACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCCGTGGGTCACACAGCAGATGACTATTGGAGCTGGAATCTGAACCAGATCTCATTCCTACCATATCTGCTCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTCCACTACATAAATTTGTTAAACAATGGTGGGTAAACCATGCACCTTTTTTTCTTTTCGTATTTTGATTTCAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGTTGTATCCATGATTTGGAACGAGCCCACCTGAGCCTAATGATGCGACGAGATCATTGGATTATATATGTATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TACTTTAAAAACACAAGGTAGAAAACTTTACTGAGTCCATGAAAAGAAAAGCTGGAGACACGTCAAAGCCTGTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTGATTTAAGTGGAATAGATCCAGCTTGAGTGTAAATTCGAGACTGTGTTTGCTTGTGTCACACTCTATTTTTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAATTACTTTCATATGTCCTGTTTCATTTATTTCCCCCAGTTCGGAATGGGAAAACTGAGGCCTGGGACTTGAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATAACAGATGTATGTTTGTACAGCAAATCATCATGAGAGCCAAAACTCAAACCCATACTCTCTCACCGAACCCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACTGCTTCTTTCAGCACACAATAATTATTATTATGCCAAGTAAGTTTAACAAGGTGACTTGGATCGATTCATTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGATGATTTGAGTTGGCTCCTGGGATCATCTGGGTAAATATTAGGCCCACATCTCTTTCCAAACATATTCCATC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCTCTCTCTCTCTTTGGTTTTTTCTTTTTTCTACATTTTCACCTCTGCTCCCTCATCATACCTCCCTCCCTTTC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCTGTTGAACTCCTCCCCTTCTCTTCTTTCCTCCCTTCCTCTCATCCTCTCACCCACAAAAACATTTGTTTGTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTACATAGGGATAGTGTCATGTGACTGGGTGGCTGAAAGGAGAAGTATCTTTTAAGCTCCTGGAAGCAGAATAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTTCTTATGGATTTTTTATTGTTTGGATTGTTTTGCCAGGCTAATGAAAGAAGACTCTGAGGTCCCCTTATCTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGGCCAACTAGAGGATGCCTTCAAGTTTTTGTTTTTCTTCCCAAGCTGGTTCCTTACAAATGCATCCAGAAGGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CATTCCCAGGTCCCCAAGATAGTGGTGGGTAATCAATCACATCCAGGACATCAGCATCACAGCAGATAAGCTCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGCATGGGAGGATTTGGGAAAGGAGAGAGGGGATCCTAAACTATCCCTGAACCATGTGCTCCAGCAAAGGCAAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGGAGGGATTACTTTTTCTAGGAGTTCACTGGGACAGCCACAAGTATATTCTAGCTCCAATGACCATTCTTCCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTTTGATTTTTGACTCAAAACAAATAAAAATACACATACATAAAATCCTTAAACATTTCCTATATAATCTGATA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATTGCAATTCAGCAAGCAATAAAGATTGTGTGATTGTGTTTAACAGCTCCAAGGGATGGGTCCACACAGGGCCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCAGGCAATAACTAATCCCTCTGAAACAAACAGAGAGGACTCCAGACCTGGCTTTGCCAAGGACAAGTTTTGTA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGCTTATTTAAGTCACCTGACTTCTCTAGGCCTCAGATTCCTCAGCTATAAAATAATGAGCTAGTTTATTATTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CAACCAATGCTTATTAAACATCCACTTTGTGTCAGGCTTTGTGCAAGAAGCTGGAAATATTTTTAAAGTATAGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CACAGTATCTGTTCTCAGGGTCTCAGTGTTTAATGCGGGAAAAGATGCATCATAAGAGAAAAGTGCTGTGGACG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCAAAGGCAAAAACAACTCAGCCCAGGAGCTTATCTTTAGGATTCTTCCCAACCCCAAAAGTCTACGTGTATGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CATTTTTTTGTCTGTTCATTTTGTTTTGGTTGTCTTTTCACATGAATGTTATTTCATTCTTTCTTGACTAGTTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTTTCAAATCATTGTTGCATTGTTGTCATTATCATCCATTACCAATTACTAAACACATACTGTTACCCCAAATG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTGTAATTACCCCAACTGTTGGTAATTACCCCAATGACTCTAAAAGTTAGACATTATAATCACTATTTTTTATA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TAATAACACTGAAGCCCAGAGAGGTTAAGTAACTTACCCAAGCTCACATCGCTAGAAAGTTACGGAACTGGGAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TGGAGTTGACCCCTGCCAACTCCAAAGTACATGCTCTTTCTACTACTTGGTGCTGCCTTAGGTATATGTAGCCA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CTTAGGACAAACATCATTTACAGGAGCAGGTGTGATATAAAAATATGAGGCCCTTTGTTCAAATATTATTGAAA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 ATTTCAAGATAGCAACAGCAAAGCATTAAACAAAGCACAAGGCCTGTCTAAGCACAGGGCTCTGAATGACTGCC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CATGTTGCAAACCCAGGAATCCAGCCCTGCCAGCCACAATTCAGTTTGCAATGGCATCTCCCACTGAAGCAGAA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AAGCTTCATAGCAATTTGCAGGCCCAGATCACACTCGCAGAATGTTTCAGTGATCATGCTTCACATGTAGGATT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TCTGGCACTACCCAGAGGGTTCATTGTGAACCACCTGGCAGGACTTGGGGGCTCTGTGTGGTGGCTTTTTCAGA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GTAGCCCTGGCACCTAACCTAAAGAATATTAATATCATTTCTGGTAATGCCAATTACTTTATTTTTTTTTGAGA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TGGAGTTTTGCTCTTGTTGCCAGGCTAGAGTGCAATGGCACAATCTCAGCTCACCACAACCTCTGCCTCCCAGG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGACACCACACCTGGCTAATTT 4070
Query 1 -------ATGG---------GGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGC 58
.||| |||||||||||||.||||||||||||||.|||||||.||||||||||||||||.
Sbjct 4071 TGTATTTTTGGTAGAGACAAGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGATCCGA 4144
Query 59 CCACCTCAGCCTCC------------------------------------------------------------ 72
|||||||..|||||
Sbjct 4145 CCACCTCGACCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACAGCGCCCGGCCAGCCAATTACTTTTTTTAA 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TGTGGGGAAAGGTATATAATCTTGCTGAAAGAGTTTTGCTCCGTGTGATGGTTCATACCTGTAATCCCAGTATT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TTGGGAGGCTGAGGCAGGAGGATGGCTTGAGCCCAAGAGTTTGAGACCAGCCTGGGAAACAGAGACCCCTGTCT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CTACAAAAAATACAAAAAATTAGCCAGGCATGGTGGTATGTACCTGTAGTAGGAGGCTGAGCTGGGAGGATCAC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 TTGAGCCTGGGAGGTTGAGGCCACAGTAAGCCATGATCATGCCACTGCACTCCAGCCTGGGTGACAGAGTAAAG 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 AAAAAAAAAAAAAAAGAGTTCTGGTCATACCCTTACACCCTTACTCTTACATTTAGAACATTTAGAACATTAAT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GCTGCATAAATGGAACATGTCCAAAAGCCTCTTAGGATGCAAGCCTCTTTTGAAATTGCAAACTGGGACCAGTA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 CATGTGCCCTAATAGAGGGCAGTAGGAAAAAAAGCAAGAGCTTTGCAGCTGCTGGATTACGAACCTCTCTACTG 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 AGGCACTAACTCCTATTAAGGTGTTAGCTCCTACTGACCCAGCAGAGGCTGAGTAAAGATTGTCATTTTGGTCA 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 ATGATTCTTAATCAGTGGTATTTAATCTTTTGAGATCACAGACCCCTTCTTTGAAAAGTATGAACCATCTCCCC 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 AGAAAAAAGACAGGTGTATGTAAAATATTCTTGCATTCAATTGTAGACTCTCTGCCTTAGCCCTAGATTTTTTA 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 AAACCATATTTTAAAGCATGGCTCCCCTAATTATAGAATTGTCAGAGGCGTCTGAACCAGAGCAACTCCATCTT 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 GAGTAGGGGCTGGGTAAAATAAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAGGCATTCTAAGTCACA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 GGATGAGATAGGAGGTCAGCCAAGATACAGGTCATCAAGACCTTGCTGATAAAATAGGTTGCAGTAAAGAAGCC 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 AGCTGAAGCCCACCAAAACCAAGATGGCCATGAGAGTGACCTCTGGTTGTCCTCACTGCTACACTCCCACCAGC 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 ACCATGACAGTTTACAGATGCCATGGCAATGTCAGGAAGTTACCCTATATGGTCTAAAAGGGGAGGCATGAATA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 ATCCACCCCTTGTTTAGCATATAATCAAGAAATAACCATAAAAATAGGCAACCAGAAGCCTTCTGTCAGTGGAG 5402
Query 73 -------------------------------------------------- 72
Sbjct 5403 TAGCCATTCTTTTATTCCTTTACTTTCTTAATAAACTTGCTTTCACTTTA 5452
