Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_135106.1
- Aligned Length:
- 4269
- Identities:
- 65
- Gaps:
- 4197
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGGTGGGAGTCAATCATTTTGACAAGTCTCCTGAAAGGAACAGCTAGCAGGAACTGAAACCTTTTTCCATTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTCTCGTGGCAAAGGCAGAGATTGCTCCAGCAGCTCCACACAAAATGATGTGCTCACGGGTGCCCTCTGAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCTTCTGGTACCTCTCTCTTGCCTAAAGACGGTGCCCCATTTTCTTGGGATTCCTTGGATGAGGATGGATTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGACTCCTTGCTGGAGCTGTCAGAGGGAGAAGAAGATGATGGTGATGTAAATTACACAGAGGAAGAGATTGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCACTGTTGAAGGAAGATGACCCATCATATGAGCAGTCTTCTGGGGAAGATGATGGTGGGCATGTTGAGAAGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGAAAGAGGGAGTCAAATTCTACTTGATACTCCCCGAGAGAAAAATTCATCGTACAGCCTGGGACCAGTAGCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATCAAGTGGTCATGGACCAGCTCATACTAAACCATTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AACAGACGCTCTGTACTAGAAAAGAATCTTATAAAAGTAACTGTTGCACCATTTAATCCAACAGTTTGTGATGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGCTTGATAAGGACGAGACTGATTCGTCCAAAGATACTGAAAAACTCTCTTCCCTTGGAGAAGAGATGAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGATGGTCTTAGCCCAAATGAAAGCAAACTTTGTACTGAATCTGAAGGGATCAGCCCCAATAACTCTGCCTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATGGGCCCCAGCTCTCTTCTTCAAACAATAACTTTCAACAGACTGTCTCTGATAAAAATATGCCTGACAGTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAACCCTACGTCTGTATTCTCTCGGATCTCAGACCATTCAGAGACTCCTAATATGGAGTTATCCTGCAGAAATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGGTTCACACAAGTCAAGTTGTGAAATGAGATCTCTGGTTGTTTCCACCTCATCAAACAAAGATGTTCTTAAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGGATTCTGGGAAGATGAAAGGCCATGAGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAACTAAGACCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACTAATGTTCCGACGTTTTCACAGTCAAATCTAGAACAGCAGAAGCAGCTTTATCTCAGGAGTGTCATTGCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATATAGAAGACCCAGAGGACACTAACCAAGCCAAAAAATACTGGAAACAGCTTTGATAAAATGTTGATAAATGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGGATGAATCCCTAGAAGTGGAATTGCTGGGTATCTCGGGGGAGCTTTGTGCCTTGATGGATCAAGTTCATCAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGCAGCACTCAAAATGGCAGCATCCTTCGGACCTCACCACGCGAAACTACGCCCGCCGACAGAAACATCTGCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGATACAGTCTGACTCAGTGGGTTGACAGGAACATGCGAAGCCACCATCGGTTCCAGCGTCTCCCAGACTTCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGTACAGTTAATTTGTGTCATCCCATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTTCAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTTCTTTTGCTGTTTTGTGCTTTGCCGATTTTGGATTTTATTTTTCACAAAATTTTTATTTAAAAAACTCGTCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTTTTGGAAATGCCCATTGCCGACTTGAATTTTTTTGTATGAAGTCCCTCCTGATTTTGTGTGTGTGTGTCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGTTTAAGCAAGCGTTCGGTTGGTATAGTTTTTTTTTGTTTTTTTAATTTAAATTGAAGGTAGCTGCCTCCTGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGCCAGCATTAAGCCAGAACACCCAGGTTCAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTTTCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGTACCTCAAAGAAATCATTGTTCAATCTTCCATAAGGAAGAGATTCTTTACCAGGCTGTGAGCCAGTGTTAGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TAACTTGTGAATGGATATAAGTTACTTTTAACAACCCCTCTTACTTTTTTATTTGAATCCTCTGAATACCTGTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGTATTTTAAAGTTGGCAATCCAGGACATTATAAGTAGGATGGAGCAGGAGAAGAATCCTATTGAAAGGACAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTAAAATAGTAAATCCTCTCCTCTCCCTTCTGTAGGTACTAGCTGCCTTGATTTTTTTTTGTGGGTGGGGGGGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTTTTCATTCCTTATTGAACTTATTTTGCACAATAGTGTTTACAAATCTTATACATCTTACTTTGACAGAAGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTTATAATACCTTGTGGTCTTGAGACTGGTTGTCTCCTTTGCCTTTCTTCAAGGATTTTCCTTTTTCTTTTTAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCCCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGTTAGACGTGGATATACCTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTCAGGATGGCCTCCTTGCTGTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAGTGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TATTGTGGTGTCAGTTGATATTTAGTTTCATTTGCTGAACCCCAAATTTGAGTGTTAGTTAGGGAGCCTCCATT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTGTGGGAGAGTGTGGAAAGGCACTCTTTTTTCTCCATATTAGTTAACAAGAGGTGTCTTTAGGCCCTGGATGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TACCATCTCATTTGGTCAAGCCCCTGATACCTAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGTGAC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGCCTATGCACAAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGTGCGTCTGTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTAATGGATGTCTTAGGAGTTGGTTATTCTCTCTTTTTTTTTTGAGACGGAGTTTCGCTGTTGTTGCCCAGGCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGAGTGCAATGGCGTATCTCCACTCACCACAACCTCCGCCTCCTGGGTTCAAGGGATTCTCCTGTCTTAGCCTC 2812
Query 1 ----------------------------------------------------------------ATGGGGTTTC 10
|..||.||||
Sbjct 2813 CTGAGTAGCTGTGATTACAGGCATGCGCCACCATGCCTGGCTAATTTCATATTTTTTAGTAGAGACAGGATTTC 2886
Query 11 TCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------ 72
|||||||.||||||||||||||.||||||||||||||||||||||.|||||||||.||||||
Sbjct 2887 TCCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCCACCTCGGCCTCCTAAAGTGCTGGG 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 ATTACAGGCATGAGCCACTGCACCTGGCCGGTTATTCTCTCTTTACAGATAGCTATAGACATCATTTTAGGAAG 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 TGTTGCAGTCTGGCATTTGTGCTATTGTTCATTCTCTGTGAAGGCTGTTCATAGTTGCTATAGCCTGTGTTTAG 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TTTTGTGATTTCATCAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAGAAACGG 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 ACGTGGGGAACGCTTGGTCATTTAAGCCAACAATAAATTTAGGTGAATGTCCCTAAGTGTTTACTGTTTTTATC 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 CAGTCAAGGATTTGCTTTTCCTTGAACATTTGTTTTAAATTCTGGGGCCAAAATGCAAAGGAGAAGTTCTATTC 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 AAAGGCAGTAGTTGAAATCTATTATTTTAGTTAGCCTACTTGGCATTTACTACATCGGTCACTTCTCCAGGCTG 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 CCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACATCCACCTTTGGGACCATAGCATAGTTAAAATTAAATG 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TAGTTGGAATAGCTAGCATTGCAGCTACAGTAGGGAACTGTAGTCTAGTTCCCTACAGAAAACCCAAGGAGTGA 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 AGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCGTGCCCTCCTGGTACATGGGGTTTTAAGACTGAATGT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 GTAATAGGAGCACTGCCTTTGCCAAATCAAATGAGTGACAGGTTAACTAGAAAATGTGACAATCACATTTCCTC 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TTAGCTCAAATAATTCTGTTTTTCCAAAGCTTTAGCAGCTTAATTAAATCTGTTGGACTGGGGGAGGAGAGAGC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TGTTCTCTAGTGGTTAACATGGTATTCTTTAAGAAGAAAAAACAAAGCCAAAGAAAACTCATTATCTGGCATGT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 TCGCCTTAAAGATGGTACTGGGTAGAATCTGGAGTTTTCATCTCTTTTCAAAGCTGCATATCTCTTATATTTGG 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 TATTGGCCTCTAAGTCTAATATTGCAGTTGGAATTCTTGCTGTATTATTTTTTAAGCAAGTGTTAGGTGCATTT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 AACTGCTTTCTTCATCCATGACGACATTCCCACCATGGGGGTCTTGACAAAGCAGAGTAAAAATATGCTGTTTA 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CATTGTTTACTTACAAGTAAGGAGCCTGAAATAACCTGTAGTTTCGAATGCAGGCCCTGATTTACTGGCGTTGT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CAGTTTCAATTATGAAACTGAAGTTTGGTGCCTCCTCTTTATCATGTTTTTTCCCTTGTAGCAGTTGTGTTTAA 4218
Query 73 --------------------------------------------------- 72
Sbjct 4219 TGTCATTAAAAAGAAATAAAAGTTCTTTGTCAGTGACATAAAAAAAAAAAA 4269
