Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_135107.1
- Aligned Length:
- 4226
- Identities:
- 65
- Gaps:
- 4154
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGGTGGGAGTCAATCATTTTGACAAGTCTCCTGAAAGGAACAGCTAGCAGGAACTGAAACCTTTTTCCATTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTCTCGTGGCAAAGGCAGAGATTGCTCCAGCAGCTCCACACAAAATGATGTGCTCACGGGTGCCCTCTGAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCTTCTGGTACCTCTCTCTTGCCTAAAGACGGTGCCCCATTTTCTTGGGATTCCTTGGATGAGGATGGATTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGACTCCTTGCTGGAGCTGTCAGAGGGAGAAGAAGATGATGGTGATGTAAATTACACAGAGGAAGAGATTGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCACTGTTGAAGGAAGATGACCCATCATATGAGCAGTCTTCTGGGGAAGATGATGGTGGGCATGTTGAGAAGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGAAAGAGGGAGTCAAATTCTACTTGATACTCCCCGAGAGAAAAATTCATCGTACAGCCTGGGACCAGTAGCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATCAAGTGGTCATGGACCAGCTCATACTAAACCATTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AACAGACGCTCTGTACTAGAAAAGAATCTTATAAAAGTAACTGTTGCACCATTTAATCCAACAGTTTGTGATGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGCTTGATAAGGACGAGACTGATTCGTCCAAAGATACTGAAAAACTCTCTTCCCTTGGAGAAGAGATGAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGATGGTCTTAGCCCAAATGAAAGCAAACTTTGTACTGAATCTGAAGGGATCAGCCCCAATAACTCTGCCTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATGGGCCCCAGCTCTCTTCTTCAAACAATAACTTTCAACAGACTGTCTCTGATAAAAATATGCCTGACAGTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAACCCTACGTCTGTATTCTCTCGGATCTCAGACCATTCAGAGACTCCTAATATGGAGTTATCCTGCAGAAATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGGTTCACACAAGTCAAGTTGTGAAATGAGATCTCTGGTTGTTTCCACCTCATCAAACAAACAGGATGTTCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AACAAGGATTCTGGGAAGATGAAAGGCCATGAGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAACTAAGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGACTAATGTTCCGACGTTTTCACAGTCAAATCTAGAACAGCAGAAGCAGCTTTATCTCAGGAGTGTCATTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCATATAGAAGACCCAGAGGACACTAACCAAGGATGAATCCCTAGAAGTGGAATTGCTGGGTATCTCGGGGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTTTGTGCCTTGATGGATCAAGTTCATCATATGCAGCACTCAAAATGGCAGCATCCTTCGGACCTCACCACGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAAACTACGCCCGCCGACAGAAACATCTGCAAAGATACAGTCTGACTCAGTGGGTTGACAGGAACATGCGAAGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACCATCGGTTCCAGCGTCTCCCAGACTTCTCGTACAGTTAATTTGTGTCATCCCATCAGCAATGAAGGTCCCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATCCAGGGTCCTGCTTGGAGCAGCATTTCATGTTCTTTTGCTGTTTTGTGCTTTGCCGATTTTGGATTTTATTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCACAAAATTTTTATTTAAAAAACTCGTCACCTTTTGGAAATGCCCATTGCCGACTTGAATTTTTTTGTATGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTCCCTCCTGATTTTGTGTGTGTGTGTCTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTTTTTTTGTTTTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTAATTTAAATTGAAGGTAGCTGCCTCCTGAAAGCCAGCATTAAGCCAGAACACCCAGGTTCAAGCAAAAGACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CACCTCTCTGCAGAGGCAAAGTCTACTTTCTGGTACCTCAAAGAAATCATTGTTCAATCTTCCATAAGGAAGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATTCTTTACCAGGCTGTGAGCCAGTGTTAGATAACTTGTGAATGGATATAAGTTACTTTTAACAACCCCTCTTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTTTTTTATTTGAATCCTCTGAATACCTGTCAGTATTTTAAAGTTGGCAATCCAGGACATTATAAGTAGGATGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGCAGGAGAAGAATCCTATTGAAAGGACAAATTAAAATAGTAAATCCTCTCCTCTCCCTTCTGTAGGTACTAGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCCTTGATTTTTTTTTGTGGGTGGGGGGGATTTTTTCATTCCTTATTGAACTTATTTTGCACAATAGTGTTTA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAAATCTTATACATCTTACTTTGACAGAAGACTTATAATACCTTGTGGTCTTGAGACTGGTTGTCTCCTTTGCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTTCTTCAAGGATTTTCCTTTTTCTTTTTACCCCCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCTTGTAACCTGTTAGACGTGGATATACCTCTTCAGGATGGCCTCCTTGCTGTCTTTATTGAAGAGCTGCCCAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCAGAGTCTTGACTCTAGGGCAGGCTAGTGCTATTGTGGTGTCAGTTGATATTTAGTTTCATTTGCTGAACCCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAATTTGAGTGTTAGTTAGGGAGCCTCCATTCTGTGGGAGAGTGTGGAAAGGCACTCTTTTTTCTCCATATTAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTAACAAGAGGTGTCTTTAGGCCCTGGATGTTACCATCTCATTTGGTCAAGCCCCTGATACCTAGTTTCACATG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GATGCTAACGTGGATGTAATATAGTTGTGACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGTTTGGTATT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTAACCAAAGTTGACAGACTGTGCGTCTGTCTTAATGGATGTCTTAGGAGTTGGTTATTCTCTCTTTTTTTTTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGACGGAGTTTCGCTGTTGTTGCCCAGGCTGGAGTGCAATGGCGTATCTCCACTCACCACAACCTCCGCCTCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGGGTTCAAGGGATTCTCCTGTCTTAGCCTCCTGAGTAGCTGTGATTACAGGCATGCGCCACCATGCCTGGCTA 2812
Query 1 ---------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGA 53
|..||.|||||||||||.||||||||||||||.||||||||||||||||||||
Sbjct 2813 ATTTCATATTTTTTAGTAGAGACAGGATTTCTCCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGA 2886
Query 54 TCCGCCCACCTCAGCCTCC------------------------------------------------------- 72
||.|||||||||.||||||
Sbjct 2887 TCTGCCCACCTCGGCCTCCTAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCTGGCCGGTTATTCTCTCTT 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 TACAGATAGCTATAGACATCATTTTAGGAAGTGTTGCAGTCTGGCATTTGTGCTATTGTTCATTCTCTGTGAAG 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 GCTGTTCATAGTTGCTATAGCCTGTGTTTAGTTTTGTGATTTCATCAATCCCATCTTTCTGTGTGAGTAATGCA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TTCTAAACATCCTACCCCACTTTAGAAACGGACGTGGGGAACGCTTGGTCATTTAAGCCAACAATAAATTTAGG 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TGAATGTCCCTAAGTGTTTACTGTTTTTATCCAGTCAAGGATTTGCTTTTCCTTGAACATTTGTTTTAAATTCT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 GGGGCCAAAATGCAAAGGAGAAGTTCTATTCAAAGGCAGTAGTTGAAATCTATTATTTTAGTTAGCCTACTTGG 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 CATTTACTACATCGGTCACTTCTCCAGGCTGCCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACATCCACC 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TTTGGGACCATAGCATAGTTAAAATTAAATGTAGTTGGAATAGCTAGCATTGCAGCTACAGTAGGGAACTGTAG 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TCTAGTTCCCTACAGAAAACCCAAGGAGTGAAGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCGTGCCC 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 TCCTGGTACATGGGGTTTTAAGACTGAATGTGTAATAGGAGCACTGCCTTTGCCAAATCAAATGAGTGACAGGT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TAACTAGAAAATGTGACAATCACATTTCCTCTTAGCTCAAATAATTCTGTTTTTCCAAAGCTTTAGCAGCTTAA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TTAAATCTGTTGGACTGGGGGAGGAGAGAGCTGTTCTCTAGTGGTTAACATGGTATTCTTTAAGAAGAAAAAAC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 AAAGCCAAAGAAAACTCATTATCTGGCATGTTCGCCTTAAAGATGGTACTGGGTAGAATCTGGAGTTTTCATCT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CTTTTCAAAGCTGCATATCTCTTATATTTGGTATTGGCCTCTAAGTCTAATATTGCAGTTGGAATTCTTGCTGT 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 ATTATTTTTTAAGCAAGTGTTAGGTGCATTTAACTGCTTTCTTCATCCATGACGACATTCCCACCATGGGGGTC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 TTGACAAAGCAGAGTAAAAATATGCTGTTTACATTGTTTACTTACAAGTAAGGAGCCTGAAATAACCTGTAGTT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 TCGAATGCAGGCCCTGATTTACTGGCGTTGTCAGTTTCAATTATGAAACTGAAGTTTGGTGCCTCCTCTTTATC 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 ATGTTTTTTCCCTTGTAGCAGTTGTGTTTAATGTCATTAAAAAGAAATAAAAGTTCTTTGTCAGTGACATAAAA 4218
Query 73 -------- 72
Sbjct 4219 AAAAAAAA 4226
