Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- NR_160800.1
- Aligned Length:
- 3801
- Identities:
- 63
- Gaps:
- 3731
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGAGGACCAGGGTCGCGCCGAGAGGCCGGAGGGGGCTCCAGGCAGCCTGGAGCTGACGGCGCCGGGCTGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTCTTCACCTGGGGGTGGGGGGTGGGGGCACGTACTTTGTGACCAGGATGGTGCCGAGCCCCCTCTACGGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGCTTGCAGGGGTGCGGGGGTGTGACTGGCGCTCCGCGGACTCGTGTCCACAGTACAGAGGACATGTAGGGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGCCGGGGCGCGGCTGCACCGGGGCCTGCCTCGCGGACCTGGACTCGGGACTCCGGGCGGCCCTGCCTGGTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATTGCCTCAGCCAAGTCTCCCACCTCTCTGCTCGGTTTCCCGCCCCACCTTTCCCCTACTACCGCATCCCTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCCTCGCTTCCCTCCGCGATGTCTCCATCCGAGTAAGAAACGAAGCTGAACGCATTGGTAACTGTGCTCAAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGATGCAATCGCGGGAGCCCTCAGGGTGGCGCACGGCGGAGAGGCGACGCGGGTGGCGCTGCAGAGGCGTCCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCCCCTCCGGGGACCGGGGCCCCGGAGCTGCCAGGCCCGCTGCACGCGGCGGCGCGGGAGAAACCACGGGGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAGCGCCCCCTGCAGGTGCCGGGCGCCTCCGCAGCCGCTGCGCGGACCCGACTCTTAAGGTGGCACCACCGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCCCAGCCCGCGCGCAACCCGCAGCCCTGGCTCCATCCGCCGCACTTCTCCCTGTAGCGGCGGGCCTGACCGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCGGAACGGCCGGAGTGTGCTGATGCCTGCTGCTATCTGCTTGATCCCTTCACCCTACCTCTCATCCAGGACTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTTCCGCGGATGCGCAGCTAGCGATTTCGACAGGCGAGATTGAAAATTCCGGGCGAGTATATGAGGTTGAGTAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTCCCGCTTCAGGGAGGAACGACCAGAATGACATTTCTTTAAGCCTAAATCAAACTTTTATTTTCGTTTATAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGCAGAAGGCCAGCAGGAAAGGGTCGCGGAGGACTGGCACATCCACAACCGTAGGACTCTTGGATCCAAGTTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTAGGCTGAGACTGGGCGGTCCGGGGTTCTCCTTCGGCGCTCACACCCCGCAAACTCGTGGGCAGTGCAGTGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAGGCCGGGGGCAGTGGCGGACCCGCAGGGTAACCTTGTCTCGCGCACCTCCCGAGCCCCCAGCAGCCCACTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCGTCCGAATGCTTTGTTTATTTGGTGACACCAGGGAACGTGGAGAAGAAGATCGAAGTTCAGTTTTTCTTTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTTTATTTTAAATATTTTTCTTAACTAAATGGTATGTTTATGTGAACCCATCATCTCTTGGAATTAAGTGTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCAGCGAACTCCAGATTCCTAGGGGAAACCTACGTGCCCAGAGCAGGAAACGCACAAGTCAATTCAGGTTCCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCCATCCGCAGTAAATTCCCTTCCTTTTGCTCCAAATTCCTCCTCTGCGTCCAGGAGAGGGACCCCCGGGACT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCCGCACACCCAGGACCGGGAGCGGCAGAGCAGAGGGCGGGTGCGAGGGCGCGAGGGAAGGGAGGCGGCCTGCG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACCTGGGGCGCGCAGTTTCCCGGCTCCGTGGGAACCTCCAACCCCGGGGCGCGCGGCCTAGGCTCCGCCCTGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGGCTTGGGGCCGAGCGGCCCACCTAGTGGGTCCTGACCTGGGGAAGCCGAGTCCGCGCGCGGGTCGGGCCGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GACGAGGGAAGCTCGCCTGGGCAAGTGCCGCGCGGGGTCAGACCCACCCCAGGGGTTGCAAACCGCAAGCGAAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTCGAGAGGGGCTGGAGCTTTCCCTCTGATCCGTTTTACACTGTGAAAACCGCAGGCCTGTCGCCTAGGCGGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACTTTTAAATTGGGAAGCAAATAGACGAAAAACCAAAACAAACGTACGAGCTGACTTTTCCCAGCTAAGTTTCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTCAATAAAAAGCCCGCTTTCTGGGAAAGACAGAAACTGATCCGCGCTCACGATTGCTTTCTTGGAGATTCTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGGGCACTGGGGCGCGCAGGAGGCGCGGCGACAACCCCAGCGCGCATGGGGCAGCCTGGACTGTGCCCCTCTTA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCAAGCTCCTTCCCAGGCTTCTCCGTGCTTCTCTCTCCACTGGGGTCCCGCCTCTCCACGGGTCACGCCGAGGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TATATGCTGCTTGCAAGGGGTCCGCGCTTTCTCGTTCGGCGGGAAAGGCACATGTTGGAGCTCGATGTTGGGGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCAGGGTGTGGTTGATTTGTCTGCTGATCTGGGTTTCTTCCCAGCACCGGGCAGGAAGTGTAGGAGTTTGGGTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCCAGTCCAGGGACTCGGGAAACTTCCAGGCCAACCAGAAGAAACACTTGCAGACACCTTTCGAATGTCACAGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTCCCCAGGGGAAAAAGCAGAAGTTGCTGGGCACATCACCCAGCACCCGGGCAAACTCTCCACTTACCTCGCG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCCTGCTAGGGGGTGTTGGGGGCCCTCCGGGAACCCCTAGATGAGCAAGCAAAGTTGCAAGAAGTGGGGTGGGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AACGCTCACCCGATAAACCATGCACCAAACTTAATCAGCCTGTAATGCTTACTCTAAATCTAGGCCCATCTAGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCAGGTGGGCTGAGTCTTGGGATAGTGGGTGTCTCCTTCCTATGTTGATACATTAAGGATTCCATATGGACAAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TATTTTTAGTCAAATTTGTGGTCCTGGAGATAGAAAGAGGAGAAGAAGAGAGAAGAAAGACAGAAGAGCTTTAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGTTCTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCCCTGTTGTCCAGGCTGGAGTACAGTGGCGCCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCTTGGCTAACTGCAACCTCCACCTCCCCGGTTCAAGCAATTCTCCTACCTCAGCCTCCTGAGTAGCTGGGACT 2886
Query 1 ----------------------------------------------------ATGGGGTTTCTCCATGTCGGTC 22
||||||||||.||||||..|.|
Sbjct 2887 ACAGGCAGCCGCCACCATGACCAGCTAATTTTTTTTTTTACTTTTAGTAGAGATGGGGTTTCACCATGTTAGCC 2960
Query 23 AGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------ 72
|||.||||||.||||||||||||| .|||||||||||||||||||||||
Sbjct 2961 AGGATGGTCTCGAACTCCTGACCT--TGTGATCCGCCCACCTCAGCCTCCCTAGGTGCTGGGATTACAGGCGTG 3032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3033 AGCAACCACCCGGCCTTATTGTTCTTATATTAAAACAAAAGAACCTAGAAAAAATTGCTTGGTTAAATTGTAGA 3106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3107 GAGGAAGGGAGGGAAGGAAAATGAAGGCTTTTCTTCTTTGTTCTTTAAAAGTCCAAGCACTTTCTTTCAGAATC 3180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3181 AAAATGTAGAGAGGCAGTCAGTCTTGGAGCATGCTTTTGCATTTTAGGATACTACTCATTAATTCAGTTTTAAA 3254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3255 GCATTCACTGGGTTGAGCACAATTTTAAAAAGGTTCTGACTCACCCAGATCCTGTTTGAAGCTCAACTCATTTT 3328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3329 GATTGAAAGAGATTTGAGACAAGAATTTCAGAAGAGAAAAATGTGTGTTACACCTGGACATATATACACATGTA 3402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3403 ACAGGGATTGTATTCCTTCTAGTCTAAGACAAGAGATTCTATGGTAAATTATTTAAAAAAATTAGTTTTTTTTC 3476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3477 TAGCATTGTATTGTCACCAGAAAGAAGAGTGCTGAATTCTCTGTTTCTGCATTTCCCAATAATAAATCTCCTAG 3550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3551 GAGAGATAACTTTTTGCAGTTGTGCCCCCCACCCATTTTCTCTGTGGCTTGCTTTATTTCCCACATATGAATAC 3624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3625 ACACACAGCAGATACATCATGCACAAACTTTTTTTAATGTGTAATCTGTAAATCTAGGCCCATTAAGTTTTCAT 3698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3699 TGAAGTTGGGAAACTGTTGAGGACTTACTTTTGTTCTTCACCATGCGTGCACTTTGCCAAGGATCTTTGGTAAC 3772
Query 73 --------------------------- 72
Sbjct 3773 CAATAAAACGATCATGTTCACTCTGAA 3799
