Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001737011.2
- Aligned Length:
- 4113
- Identities:
- 67
- Gaps:
- 4041
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCGCCCGCCTCAGTCTCCCAAAGTTCTGGGGTTACAGGTGTGAGCCACTGCATCCGGCCAGATGTGGGATTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTAAGGATGCTCAGCTAGTCAGTATAATGTAAATATTCCAAAATCCTAAAAAAATCCCAAATCCAAAACACTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGTCCCCAGCATTTCAGATGGGGACATTCAACCTGTATTGCTTTCGGAGTGAGATTTTTTTTTAAAGTATGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAACACTATGGTCATAGTTGAGCTTTTACCCTGTCCATACTCAGCCTCTACACCTTGCCCCGAGGGAAAACAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTGTGAAAGGTGTGTGTGCCCTTCAGAGCCCTCTCACTGCACCTTTACCACAAGCGTGTGAGTTTATCATGTAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATACATGGTGGCCCACGCTGTCATCTGCAGAGCCGTGTAGCTGCACCTTTACCACACGCGTGTGAGTTTAACAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCACGTACGTGGCCTCCCACGCTGTGGTCTGCAGAGCCGTGTAGCTACACCTTTACCACACGCATGTGAGTTTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACATGTACATATGTGGCCTCCCATGCTGTGGTCTGCAGAGCCGTGTAGCTGCACCTTTACCACACGCGTGTGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTAACATGCACATACGTGGTGGCCCACGCTGTGGTCTGCAGAGCCGTGTAGCTGCACCTTTACCACACGCGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGGTTTAACATGCACATACGTGGCCTCCCACGCTGTGGTCTGCAGAGCCGTGTAGCTGCACCTTTACCACACG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGTGTGGGTTTAACATGCACATACGTGGTGGCCCACGCTGTGGTCTGCAGAGCCGTGTAGCTGCACCTTTACCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACGCGTGTGGGTTTAACATGCACATACGTGGCCTCCCACGCTGTGGTCTGCAGAGCCGTGTAGCTGCACCTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCACACGCGTGTGGGTTTAACATGCACATACGTGGCCTCCCACGCTGTGGTCTGCAGAGCCGTGTAGCTGCAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTTACCACACGCGTGTGAGTTTAACATGCACATATGTGGCCTCCCATGCTGTGGTCTGCAGAGCCGTGTAGCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCACCTTTACCACACGCATGTGAATTTAACGTCTACATACGTGGCCTCCCATGCTGTGGTCTGCAGAGCCGTGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCTGCACCTTTACCACATGCGTGTGGGTTTAACGTGCACATACGTGGCCTCCCATGCTGTGGTCTGCAGAGCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGTAGCTGCACCTTTACCACACGTGTGTGGGTTTAACGTGTACATACGTGGCGGCCCACGTTGTCGTCTGCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCCGTGTAGCTGCACCTTTACCACACGCGTGTGGGTTTAACATGTACATATGTGGCGGCCCACGCTGTCGTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCAGTGTACCTGTTCATTGCATGCTGTGCTTAGATTCGGCATATTCATTTCAGCAGGTGCAGAACACTTCACTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTGAATAGGCTCTAATTTTAACATCTTTCCATACTGGGAGGCATTTAGGTTATTTCTAATTTCTCATCATTAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAAATCCCTGGGATGAACACTCTATGGAATGAACCCATATGGTCTGGTTCCGTGCTATTTAAAGTGTGGTTAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTCAAGCATTAGCAACATCTGGGAGCTGGGAATTCAGATTCTCAGGCCCCATCCAGACATAACCCAGGTGCCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGGGATTGGGGTGTGCGTCCCAGCATGGACAAGATGCCCCAGTGTCTGAGCTTGAGTCCCTCTAGTGAGTGTGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGGTCCTAATGACACCTCTGTTCCCTCTCTGAGCCTGGCCAGGCTGCTCTCGAGTGTCCCAGCCTACACACTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCCATCCGTGTGAGTTCATGCTTTCCCGGGTTCTTGCTGACACTTGGTGTCATTGTACTTTTTTGCATTTTCCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AACCCGATAGGTGAGACACAGATTCTCTTTCTCTAATTTTCATTTTCCTGATGACTAGGAAGGTTGAGCTTCTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTTCCACGTCTGTGGCCGCTTGTGTCTTCTGTGTTTCTTTCCTTTGCTCGTTCTCTCTTGGGCTATGGTCTTAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTGTGGGCATGCTTTACACATTCTGGATACGTTAATCCTATGATATCTTTTATCACAAGTTTTATTTATTTATT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTTGAGATGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGTGATTTCGGCTCACTGCCACCTCCAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCCTAGATTCAAGCGATTCTTCTGCCTCAGCTTCCCGAGTAGCTGGGACTACAGAATAGAAAAGAAACGCACC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATCATTCCTACACTGGTGGAAGCAATTAAGGAACAAGATGGAAGAGAAGTGGACTGGGAGTATTTTTATGGCCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCTTTTTACCTCAGAGAACCTAAAACTAGTGCACATTGTCTGCCATAAGAAAACCACCCACAAGCTCAACTGTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACCCAAGCAGAATCTACAAACCCCAGACAAGGTTGAAGCGGAAGCAGCCTGTGCGGAAACGCCAGTGACACGTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CACACCACGTCCTGGTCTTTGTTTGAGGCCTGACGTGGGCATCATTTTAACAGGTGCCTTTTTTGTTTTTTTGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTTCGTTTTTTTGGTCACTCCAGTAGCTCCTGGAAAAAACCTTAAAAAATGTTTCCTCCAAATCTGATTTCAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TACATTTCTGAATTGTTGGGGTTTTTTTTGTTGTTTTGTTTTGTTTTGTAGATGGAGTTTCACTTTTGTTGCCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGGCTGGAGTGTAGTGGCGCGATCTCGGCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCACGCC 2738
Query 1 ---------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTC 47
|.||||||||.||||||.||||||||||||||..|||||||||||||
Sbjct 2739 CGGCTAATGTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTC 2812
Query 48 AGGTGATCCGCCCACCTCAGCCTCC------------------------------------------------- 72
|||||||||||||||||||||||||
Sbjct 2813 AGGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATGACAGGTGTGAGCCACTGCGCCCAGCCTGAATCAT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TTCTTATACCTTCTGACAGCCCAACTTCCAGAGGACAGCTCTGGGGTACTCGTTGGATGTCTGTGAGTACCTGG 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 TCATACGGGTCAGTAGGGATAAGAATTGTCTCTGGGCTGAGGAATTCTTCTGTTCTCTGGTTTCACCAGCGTTG 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 GGTTTGCTCATGTAATGTGGTCACCATACTCAAATGGTGTCATGGCTGAAGTTGGCCACCTTGCTTGAGGGACA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 AGTTGTTTATGTATCAGCTCTCTGCTGGGTCTCCCTTTCCATGGCAAATGGGCAGCTCCATCCTCTTGACTCTT 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CTAAATGCCCAAAAGAGGTGTCATGCTTTGGGGGTACGATGTTTATACTCCGTAAAGAACATACAAGGACATTC 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 ACTGCTGATTTTTTTTTTTGTTTGTTTGAGACAGGGTCTCACTCTGTCGCTCAGGCTGGAGTGCAGTGATGCAA 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TCTTGGCTCACTGCAACCTCCGCCTCTCAGGTTCAAGTGGTTCTCCTTCCTCAGCCTCCCAAGTAGCTGGGATT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 ACAGGCACCTACCACCAGGGCCAGCTAATTTTTGTATGTTTAGTAGAAACGGGGTTTCACCATGTTGGCCAGGC 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TGTTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 ACTGCACCTGACCTGCTGAATTGTTTATAATGGCAAGAAATAGGAAACCCCCCAATGTCTGTTGAACAGCTATC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 ACGTTGAACCACGTGAAACTGCTGTTTTCTAGGCCAAAAATGGTGAGCGATCATTTATTTCATGATTCAACCTG 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 ATACATTTACATAGTGCAAAACTGTGTCACAGTTTCAGGCTTTTATGAGGAAAGCGTTTCTGTGTAGAAACTGG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 AAGCTGTTCAGGGCATCGGCAGCTGAACCCTGCTCCGTTGGTCAGCGTTACTATCATCTCGGATCATATGGAGC 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 TCATGTCAGCCGTGTGGGTGGCGGGTGCACAGAGACGGTCTGGAAGGAAACACGCGGATCTGAACAGCAGTAAT 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 CCTGGGGGATACGGGGGTTGGGCTAGATTACAGAGGGCTCATTTTCTACGTCATGTATTTTATGATACTTGAAT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 TTTTTGAAATGGGCATTTATTTTATAACATGTTAAAATGTACTTTTTAAATTAAGTCATTTTGTAATATTTGAA 4070
Query 73 ------------------------------------------- 72
Sbjct 4071 TTTTTACATTTGTTGTACAATCAGGAAAAGCAATAAAGATTTT 4113
