Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001737158.2
- Aligned Length:
- 4368
- Identities:
- 65
- Gaps:
- 4296
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGCCACCCTGGGGAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCGAGGGTGGGAGTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGTGCGGGCCTGAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAGCCGCACTAAGAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGATGTCGGGAGCTATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGCCCGCTGTGCCACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCGTGGCCGCGCGACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGCGGACAGCCCCTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGCCCTGGGTCAGCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCGACAAGAAGTTGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGAATCGGCTTACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCACGCGGGAGGCCATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTATCCACGCCCTCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAGCCAATACGAAGAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGTCCACCTGGTCATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGATGGAGAGGCTGCAGGGCATCGTCACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGACCACCGAGCTGAATTCGCGCGCTGTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAGTGGTGCTAACACGCTGGCAGGGGGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGAAAGATGTCGGGGTCACCCGTCCAAAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGGCGAGAACACGCCCTTCGCAGAGCACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGAGCCTAAAGGACCAGGTACAGGAGCTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATGGGAGACGTCCTGCACAAGTCCCTGCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAGGGTCGTCTTCCAGGAGGTAGCCCTCCCAAGGACTCTAACTCCAGCCCCACCTGTCAGGGGATACCTGGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACCCTAAGACACTTTTCTCTTTCAGATTTGGGAGGAAGCCTATCAGCGAGTGGCTAATGAGCAGGAGATTTAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAAGGTTCCAGACAGTTGGCTGCCGAGTGAACCCTCTGTCCCTGAGCTAACCCACATACTAGCAGAGGAGGAAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCAGAGTCGGCCACTAACCAGATGCAAATCCCCACACTCTTCCCCTTAGCGCTTGACCGTGCCTCCCAGCTGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AACTGGCCTCAAATGATGCATGTGAGGTCAGGATTCATTGAGTAGAATGCCCCCACCAAGTGCCTCCCTCTTTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTAGAGGTCATCATGGAAATGGTCGGGATATTTACGTGGTGCCTGGCTTGAGTAAAAATCTGAAGCCAGATGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTCAGGATTAAGACCCCATGCTCTGGCCTTGGCCCCACAGCCCAGCTCCATGACCTTCTCCAGCTGAGGCAGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAATGCCTACCTGACCACCATCACCAAGCAGATCACGCCCTACGTCCGCTCCATTGCCAAGGTGAAGGAGCGGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGAGCCCAGGTTTCAGGCACCCGTGGATGAGCAGTCAGAGAGTCTACAGAACACGCACGACGACAGCAGGAAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AACGCGGCCTCAGCCAGGAATAATCCAGGAAGTGTCCCGGAAAAGAGAGAGAAGACATCAGAGCCTAAAGGAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAGCTGGGCTCCGAACGGCCTCTCAGAAGAGCCTCTACTGAAAAATATGGATCATCACAGATCCAAACAGAAAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATGGGGGCGATGTCCCCACATGGAGGGAACACCCGACTTAGCAAATGGGACCGGTCCCCAGGGTCAGGCTCTTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GAGCAGGCACAAGACTGGGACACTGGACAGAAGGTTGTTCCCATGATGGTTTTTTTTATTTTTTATTTTTGAGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGGAGTTTCGCTCTGTTGCCCAGGCTGGAGTGTAATGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCTGGG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCTGACACCACGCCCCGCTAATTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACGCCAGACCTCAGGTGATCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGGGTGAGTCACCGCGCCTGGCCAATGTTGTTGTTGTTTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TAAGACAGAATTTCACTCTTTGTTGCCCAGGCTGGAGTGCAATGGCGCAATCTCTGGCTCACCGCAACCTCCGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTCCCAGGTTCAAGCGATTCTCCTACCTCAGCCCCCAGAGTAGCTGGGATTACAGGCATGTACCATCACACCCG 3034
Query 1 --------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCA 48
|.|||||||||||||||.|||||||||||.||.|||||||..||||||
Sbjct 3035 GCTAATTTTTTGTATTTTAAGTAGAGAGGGGGTTTCTCCATGTTGGTCAGGCTGGCCTCGAACTCCCAACCTCA 3108
Query 49 GGTGATCCGCCCACCTCAGCCTCC-------------------------------------------------- 72
|||||||||||||||||.||||||
Sbjct 3109 GGTGATCCGCCCACCTCGGCCTCCCAAAATGCTGGGATTACAGGGGTAAGCCACTGTGCCCGGCCGGTTATTTC 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TTTAAAAGGTAATCATTTGTCAAGAGTAAAACCCAGAAGCTCTGACAGGCCATAATTTCAGATCCTTTGGCTTG 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 GGCAGTTTTGATTTTCCCCGTGTTTGCATGGCATGAAGTCTTCGTCCTTGTCACAGTAGCTTGGGATGACTCCC 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 AGTCCACATGGAAAACATCAGGGAGTGACAATCCAGCAAGAAATCCCTCGCTAGTTCCACACCTACGCACCGAG 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 CGTCGGTGTGCCAGGCCCTGTGCTGGGCAGAGTGTGGTATGTCAGGGTGTGCCGGTTTTAGGTAACAAGACTCC 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 ACCACTGAGTGGCACCTGCCCTATTGCAAAGGAATCCAGTTCCTCCGGAATAACAGTCCCACTGTTAACCTGGT 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 GCTACTGGGAAGTTCCACACAGTAATCTGAGCAGTGACTCATGGAAGGATGAGGAACGTTTGCTCCAGCTTCTC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TCCCTTTCCAGCAAGGGCAGAGCTCCTAAAGCCAGGGGTTAGCACCTGGCCAGCTTATGTGGCAGATGGTCTCA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 GTTACAACTTCGCTGCTTTCCCAAACTCCTGCAGCCCTCCTGAGTCCGACTTCCGTTGATAGCAAGGCACTGGG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TGGCAGCAACCTTTTTTCTAGTAGTTTTTTCCCAGCAGTTTTCCATTTCTCCACAGTATCCTTTTCATTTAGAG 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 GAGCTTAATAAATGCTTTTTAAAAAGTAACCCACGTGACGTAAAATTTTACAAGTTTTTGTGGCAAAATGATGC 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 CCAGATAGTCACATTTAAGCAAATATTCAGCTTGATTCAGTGATTAACAGCAAATGGGTCTACGTGCTAACATG 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 GCAGCACATTCAACACATAACACATCACTCACATTGACGTCCACTGTCCCTGCACCTGCTACTTCAGGGGCACT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 GAGGCTCCTGTTCCAAGGCCTTACAAACCTATGTGGTGGCCTGCAGGGCAAAAGGAATTATCATTACAACTGGT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 TAGAGGTAGGAATTCAGAAAGAAATTGAGGAGGCCAAACACACGTCGTTTGAGGCTAAAGGCTTAAGACGCTTC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TTACCCAAGAGTGACCTCAGAGTTTCACATCCCAGACAATCACACTGTGGTTGAGTGAAATCAAGTGCAGTTTT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 ATTTAAGAACTGGAAAGAATAATCAGTATCTGTGAAAGAAAATCCAATTTAGAATATTTAAATAAACATTTATG 4366
Query 73 -- 72
Sbjct 4367 TA 4368
