Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
XR_001737164.2
Aligned Length:
4844
Identities:
65
Gaps:
4772

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAATTCCGAGGGTGGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCGCCCGGTGCGGGCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCCCGGAGCCGCACTAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAGCGGATGTCGGGAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGTGTGCCCGCTGTGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCCTGCGTGGCCGCGCG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACACGTGCGGACAGCCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATCGTGGCCCTGGGTCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTCCACCGACAAGAAGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGGACCTGGAATCGGCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACGGCCACGCGGGAGGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGACGCTATCCACGCCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGCAGAGCCAATACGAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTGCAGGTCCACCTGGT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGTGAGTCTCCTCTGCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTGCAGATGCCCCCTCCCCACCAGGAGCCCACCCTGCAGACCAAAGCCACCAACTCAGGGGTGGGCAGCCTGT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CACCTGGAGCCTGGACCAGGGATCTCGGGGCTGACCCCCTCCCAACTCCATCATCTGCAAACCTGTTAGGGTCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTGTTACAAGGACAGTGAAGCCAGGAAGGGGGCATGAGCCTACAGTCCCCCGTGGGGCGGAGTGACCACTGGAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCCAGCCGCCCCCTCTCCTGTGGATTTGGGGATGGGATGGGGGTTTGTCCGGGTGAGTCCCAGAAGAGGGCTGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CGCTGCTAAGGGACACCAAGTCAAGTGCCAAAGACAGACGTGCTCCGCCTCCATCTCCCCTCTTCCTGCCCCCT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGCTGCCACACCTCCACCGGCCTGAGGCCCTCCTCACTGCCACAGGAGCTGATGGAGAGGCTGCAGGGCATCGT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCAGTGACCACCGAGCTGAATTCGCGCGCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTGCAAGTGGTGCTAACACGCTGGCAGGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGTAGGAAAGATGTCGGGGTCACCCGTCCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGGAGGGCGAGAACACGCCCTTCGCAGAGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATGCAGAGCCTAAAGGACCAGGTACAGGAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGATCATGGGAGACGTCCTGCACAAGTCCCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCATGAGGGTCGTCTTCCAGGAGATTTGGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGGAAGCCTATCAGCGAGTGGCTAATGAGCAGGAGATTTATGAAGGTTCCAGACAGTTGGCTGCCGAGTGAACC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CTCTGTCCCTGAGCTAACCCACATACTAGCAGAGGAGGAAGTCAGAGTCGGCCACTAACCAGATGCAAATCCCC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ACACTCTTCCCCTTAGCGCTTGACCGTGCCTCCCAGCTGCTAACTGGCCTCAAATGATGCATGTGAGGTCAGGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TTCATTGAGTAGAATGCCCCCACCAAGTGCCTCCCTCTTTAATTAGAGGTCATCATGGAAATGGTCGGGATATT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TACGTGGTGCCTGGCTTGAGTAAAAATCTGAAGCCAGATGCTTCAGGATTAAGACCCCATGCTCTGGCCTTGGC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CCCACAGCCCAGCTCCATGACCTTCTCCAGCTGAGGCAGGAGAATGCCTACCTGACCACCATCACCAAGCAGAT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CACGCCCTACGTCCGCTCCATTGCCAAGGTGAAGGAGCGGCTGGAGCCCAGGTCTTTGTTTGTTTGAGACAGTC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TCGCTCTGCCGCCCAGGCTGGAGTGCAATGGCGCCATCTCAGCTCTCACTGCAGCCTCCACCTCCCAGGTTCAA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TCGATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGTTTCAGGCACCCGTGGATGAGCAGTCAGAGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GTCTACAGAACACGCACGACGACAGCAGGAACAACGCGGCCTCAGCCAGGAATAATCCAGGAAGTGTCCCGGAA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AAGAGAGAGAAGACATCAGAGCCTAAAGGAAACAGCTGGGCTCCGAACGGCCTCTCAGAAGAGCCTCTACTGAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AAATATGGATCATCACAGATCCAAACAGAAAAATGGGGGCGATGTCCCCACATGGAGGGAACACCCGACTTAGC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AAATGGGACCGGTCCCCAGGGTCAGGCTCTTAGAGCAGGCACAAGACTGGGACACTGGACAGAAGGTTGTTCCC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  ATGATGGTTTTTTTTATTTTTTATTTTTGAGATGGAGTTTCGCTCTGTTGCCCAGGCTGGAGTGTAATGGTGCA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  ATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGAT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TACAGGCGCCTGACACCACGCCCCGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  GCTGGTCTCAAACGCCAGACCTCAGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGGGTGAG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TCACCGCGCCTGGCCAATGTTGTTGTTGTTTTTAAGACAGAATTTCACTCTTTGTTGCCCAGGCTGGAGTGCAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TGGCGCAATCTCTGGCTCACCGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTACCTCAGCCCCCAGAGTA  3478

Query    1  ----------------------------------------------------------ATGGGGTTTCTCCATG  16
                                                                      |.||||||||||||||
Sbjct 3479  GCTGGGATTACAGGCATGTACCATCACACCCGGCTAATTTTTTGTATTTTAAGTAGAGAGGGGGTTTCTCCATG  3552

Query   17  TCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------  72
            |.|||||||||||.||.|||||||..|||||||||||||||||||||||.||||||                  
Sbjct 3553  TTGGTCAGGCTGGCCTCGAACTCCCAACCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAATGCTGGGATTACA  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  GGGGTAAGCCACTGTGCCCGGCCGGTTATTTCTTTAAAAGGTAATCATTTGTCAAGAGTAAAACCCAGAAGCTC  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  TGACAGGCCATAATTTCAGATCCTTTGGCTTGGGCAGTTTTGATTTTCCCCGTGTTTGCATGGCATGAAGTCTT  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  CGTCCTTGTCACAGTAGCTTGGGATGACTCCCAGTCCACATGGAAAACATCAGGGAGTGACAATCCAGCAAGAA  3848

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3849  ATCCCTCGCTAGTTCCACACCTACGCACCGAGCGTCGGTGTGCCAGGCCCTGTGCTGGGCAGAGTGTGGTATGT  3922

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3923  CAGGGTGTGCCGGTTTTAGGTAACAAGACTCCACCACTGAGTGGCACCTGCCCTATTGCAAAGGAATCCAGTTC  3996

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3997  CTCCGGAATAACAGTCCCACTGTTAACCTGGTGCTACTGGGAAGTTCCACACAGTAATCTGAGCAGTGACTCAT  4070

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4071  GGAAGGATGAGGAACGTTTGCTCCAGCTTCTCTCCCTTTCCAGCAAGGGCAGAGCTCCTAAAGCCAGGGGTTAG  4144

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4145  CACCTGGCCAGCTTATGTGGCAGATGGTCTCAGTTACAACTTCGCTGCTTTCCCAAACTCCTGCAGCCCTCCTG  4218

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4219  AGTCCGACTTCCGTTGATAGCAAGGCACTGGGTGGCAGCAACCTTTTTTCTAGTAGTTTTTTCCCAGCAGTTTT  4292

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4293  CCATTTCTCCACAGTATCCTTTTCATTTAGAGGAGCTTAATAAATGCTTTTTAAAAAGTAACCCACGTGACGTA  4366

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4367  AAATTTTACAAGTTTTTGTGGCAAAATGATGCCCAGATAGTCACATTTAAGCAAATATTCAGCTTGATTCAGTG  4440

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4441  ATTAACAGCAAATGGGTCTACGTGCTAACATGGCAGCACATTCAACACATAACACATCACTCACATTGACGTCC  4514

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4515  ACTGTCCCTGCACCTGCTACTTCAGGGGCACTGAGGCTCCTGTTCCAAGGCCTTACAAACCTATGTGGTGGCCT  4588

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4589  GCAGGGCAAAAGGAATTATCATTACAACTGGTTAGAGGTAGGAATTCAGAAAGAAATTGAGGAGGCCAAACACA  4662

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4663  CGTCGTTTGAGGCTAAAGGCTTAAGACGCTTCTTACCCAAGAGTGACCTCAGAGTTTCACATCCCAGACAATCA  4736

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4737  CACTGTGGTTGAGTGAAATCAAGTGCAGTTTTATTTAAGAACTGGAAAGAATAATCAGTATCTGTGAAAGAAAA  4810

Query   73  ----------------------------------  72
                                              
Sbjct 4811  TCCAATTTAGAATATTTAAATAAACATTTATGTA  4844

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