Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
XR_001737207.1
Aligned Length:
3907
Identities:
65
Gaps:
3835

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGGGGGCGGGGCGGCAGAGCTCGGCGGCTGGGACTGGAGGACAGCGGTGGCGGAGGCGACTAGCGGCGGCGGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCGGCGCCGAGAGGCCGTGCGGGACGCGGGCGCCAGGACCGGCCGAACGCAGAGAAGGTAGAAGATAGCACCAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCGATTCGTCGAACTGTGAATTCTACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGCCAGAACCAGACATAAGTTCAGAGGAATCTGTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAGGAAGAAAATAAGTCTTCTGAGGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AACCAAAAAGGATGAGAAAGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCCTTTCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCAATCTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CATCCATAAGTATCCTTCTCTGGAGCTGGAGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATAGAGGAGTCATCAAACAGGTTAAAGGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACACCTCAGAAATCCAGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGTCCTCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTCAGTATTATCCTAAGCTTAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGGGGCCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGACATTCCAGGAACTCCGACCCACCTGGTGCAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGGAGTCTTGTCTTGACCTGCTTTGGGAGAGTGTTGTCTTGATGCTTTTCTCTTCCTCCTTGGAAAACAGCTGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGAAATCAGGGGAGAAACCCCTGCTTGGTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AATGAGCCGAAGACCTGCTCTACCACTGCTCTGAAGAAGTATGTCCTAGAGAATCACCCAGGAACCAATTCTAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTATCAAATGCATTTGCTGAAAAAAACCCTGCAGAAATGCGAAAAGAATGGGTGGATGGAACAGATCTCTGGGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAGGGTTCAGTGGCACCTTCCAGCTCTGTTTTCCCTATTATCCCAGCCCAGGAGTTCTGTTTCCGAAGAAAGAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CCAGATGATTCTAGAGATGAGGATGAAGATGAAGATGAGTCATCAGAAGAAGACTCTGAGGATGAAGAGCCGCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ACCTAAGAGAAGGTTGCAGAAGAAAACCCCAGCCAAGTCCCCAGGGAAGGCCGCATCTGTGAAGCAGAGAGGGT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CCAAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAGGCCCTTGCCTAAGAAAGCACCTCCTAAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCCAAAACGCCTGCCAAGAAGACCAGACCCTCATCCACAGTCATCAAGAAACCTAGTGGTGGCTCCTCAAAGAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GCCTGCAACCAGTGCAAGAAAGGAAGTAAAATTGCCGGGCAAGGGCAAATCCACCATGAAGAAGTCTTTCAGAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGAAAAAGTAAATTTTATAGGAAAAAAGGGTATCATGATGAAATTCAAAATCTTATTTTCTAAGGTCAGTGTGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ATTTGTTTAGTTTTGATGCTTTTCAAATTACATTATTTTCCTCCCCTATGAACATTGTGGGGAGGGACTCTAAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TAAACCAGTTTAGGCATTTGCTAGCTTTAGGTGCTTTTATTGGTGCCTGCCCTTTTCCTTGTTCATTTTAATTT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CTGCAATAATCCTGGACTTTCCTAAACTATGTAATGTATACTTGTCCTTTTTCTCTGCCTCCCCCAACCCCCTG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTGTTTTTATGGTCAGCTTTGCCTTTTTTTTTTCTTCCAATTTTATCTAAACAGTTGCAGAGATTTTTATATTT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GTAGAAAGCATCAAGAACGGTATGCCAGTCAGGTCCTGGAAGTAAAATGGAGGCACAATATAGCACTGACTGAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGTAATAATTAATCTTATTTATAAAAGCCACTCCACTA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  ACCTTTTCTCTCCAACTGTAAACACAGAGACAGCTTTGGGAATAAGCCAAAAACAGGGTGATCTCATTAGATTT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGAAGATATATGACTCCTTTGGGCTACATTTCATATTGATCAATTTCTAGGTATTTTTCACTGGCCCAAAGTAT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TGCATTCCCTTAACAGCAAGCACAAGTTCTCTATATCACTTGTTTTTTGTTGTTGTTGTTGTTGTCGTCGTTGT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TTTGAGACGGAGTCTTGCTCAGGTGCCCCGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTCCACCTCCT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GGGTTCAAGCAATTCTCCTGCTTCAGCCTCCCGAGTAGCTGGGATTACAGGTGTGTACCACCACGCCTGGCAAT  2664

Query    1  ---------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGA  53
                                 ||||||||||.||.|||.||||||||||||||.||||||||||||||||||||
Sbjct 2665  TTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCGTGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGA  2738

Query   54  TCCGCCCACCTCAGCCTCC-------------------------------------------------------  72
            ||||||..||||.||||||                                                       
Sbjct 2739  TCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACTGTGCCTGGCCTATCCCACTTGGTT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  TTTGACTGAAGGGGAAGTGTAGAAATATATTGATTTGTGATTTCTGGTGTCACCTGTGTTACCAAAAATCAAAA  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  CAAATCTTTTTTATTTTTTATTATTATTATTATTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGTGTGGAGTGC  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  AGTGGTGTGATCTTGGCTCACTGCAAACTCCGCCTCCCAGGTTCAAGCGATTCTCCCACCTCAGCCTCCTGAGT  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  TGGGTCCTACAGGCGCACACGACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGTTGGGGTTTCACCATGT  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  TAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACTCACCTCAGCCTCCCAAAATCCTGGGGTTACAGAT  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  GTGAGCTACCACTCACGGCCCAAATCTTCTTGATCATATGTTTAAATATATTTTTTAATATTTGGAGCATGAGT  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  TGTCACTTCTTGTTTGCCTTTTTTATAAGGAAATGTTGGAGAGTTACATCATTGCTAATGTAGAAATGTTAAGT  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  GGAAAAATATACAGTTTGGTAAAATAAACTAGATTCTACATTTATTTGTGGGTTTTTTTCCCCTCCTTTCTTTC  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  CACAGCACTTTTGATATCAAGCAAGTGGCTTCCTTTTTGAGATATTAAAAAAAAAAAGAAAAGGAAAAAAGTAA  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  ATGAAGCCCAACTACCTAACCCTTTCTTATTTGTATTTGTTTTAGTATTGTGAAGTTGTGTTAAATAGTACTAG  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  CTAGAAATACAAATTTCTGGTTATCATTTCTCTTCCCTGTGGCACTTGACATTTTAATTGTCTTAAAGTTTTTG  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  AAGTACATCTTCTGGCCCCTTGAGTACTGCCAGAGGCAAAAGATGTTTGTTTCTTATTCATTCCACTTTTGTCT  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  CCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAATGGACTTGAGAAGATTGGCTTGAATTAGATCATAA  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  TCATGTGTGATCCCATCATGAATTCATTGGAATTTGTGTTGCATGTAAGGCAATCTTTCCTGTTGTAAATCTTC  3848

Query   73  -----------------------------------------------------------  72
                                                                       
Sbjct 3849  CTTTTTTAATGTACATATATTTTGAAAAATATGAATAAACATGAAATTTTAAAAGCTGC  3907

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