Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001742760.1
- Aligned Length:
- 5419
- Identities:
- 64
- Gaps:
- 5347
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCCTCCCACCTCAGTTTCCCAAGAAGCTGAGACTACAGGTTGCATACCATCATTTTCCTTATCTTTGAGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGACAGTTCTGCATAGACTGATATTTGCCCAGTGTAGTAAAACCACACAAGCAGAAAAAGAGGCTCTTGGCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGAGAGTATGGGGGAAATCACAGAAAAGAGGAAGCTCAAGGAAAAGTTCCTAAAAAGCTGTGTATAAAGTCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGCTCCACCCCCAGCTGCTCATGCATGGAGCTGACCCAAAGCAATATACCAAAGGCTCTGAGAACTGGCTGTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGTAGACTACCACCAGAATGACCACCTGGGTGATGCACATGTGAGGCAGATCCAAGTAGCACTGCAAAACCTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAAACTGAAGTGACACTAAAGCCACAGCTTACTAAAGGTATGTCCAAACTTATGATCTGAACCAACCAGGTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATTGGCAGCTAAAACAACAAAGTAAACATTCACCAAAGGACTTTAACAAGACTCAGAGACTTGTAAAATATAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTAACATTCAGGAATAATCTAAAATTGCTCAACATATAAGGAACCAGGAAAATCTCACCAACTTGCAAGAAACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGCCAGTCCCAAAATGATTCAGATGTTAAACCTATCAGACAGTGACTTCAAAGCAGCTATTACAGCCAAGTTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGTATAGCTACTCACAGGTCTGAGGTGGAAGGATCACTTGAGCCCAGGGTGTCAAGGCTGCAGTGATCCTTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCATGCTACTGCACTCCAGCCTGGGCAACACAGTGAGACCCTGTCTCAAAAAAATTAATTAATTGATTGATTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTAAAAAAGGAGTTCAGACTTTAATTTCCAGTTCAGATGGAGTAAGCAGCACATATCACTTTATCTTTCCCAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATTACAACCAAAAACCCTTGAAAGAAAACACAACTAGGAGTCTGAAAAGTACATAATAGCAATAAGAGAGCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAAGAAGAGAGAACACTCTTGAAATGAAAGAAAAATTATCTGCAGAAAAATAGAAGCTACAAGAAAGTGCCATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGGAGTGGGGAATGGAGAGTTGTTGAATGGATATGGAGTATCAGTTTTGCAAGGCAAGAAGAGCTCTAGAGACT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTTGCGCAACAATGTGAATGTACTTAACACTACTGAACTGTATACCAAAAATGGTTAAGATGGTAAATTTTAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTTACATGTATTTTACCAGAATAAAACTAAATTGGTATGTACTTACCTAGAAAGATGTTCATAATATAGTTCTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTAAAACTAAATTATGTTTCACAGTGAAGGAAGGGAAAGAAGGCAGGAAGGAAGGACAAAGCGGTTATGTACA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AACTGAAAACTACATAATTGAAATTAAAACCTTTGCTGGATGGACTCATTTGCCGAATGGAAATGATAAAATAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGATCTTAAAAGGTCAAGATCAAGATATATTATCCCATTTGAAACAGAGAGGAAAAAAGATTGAAAAAAATAAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGACTTGCATACCTGTGGGACAATATCAGAAAGATTAACATTTATGTCTTTGGTGTCCCAGATCAGGAGGAAGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TACTGCTGCAGATGAATATTGAAAAAAATAAAGGATAGAAACTTTAAAATTTGGCAAAAGACATGAATGTAAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTCAGGAAGTTCAGGAAACCCCCCAAACAAGATACACTAAAATCAACAACAACAACAAAAAAACTACATTGAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGCATCCAAATTTACTTGCTGAAAATTAAAGATTTTTAATTGCTGAAAAATTTTAAAATGTGGGCAGGTGTGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGACTCATGCCTGTAATTCCAGTACTTTGGGAGGCCAAGGCGGGCAAATTGCTTGAGCCCAGGAGTTCAAGACC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCCTATGGCAAAGCCCCCATCTCTAAAAAAAAAAAAAAATACAAAAATTAGCCAGGCATGGTGGTGCACACCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTAGTCCTAGCTACCTAGGAGGCTGAGGTGGGAGAATTGCTTGAGCCTGGGAGGTGGAGGTTGCAGTGAGCCGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GATTGTGCCACTGCACTACAGCCTGGGCGACAGAGTGAGACACTGCCTTAAAAAAAAAAATTGAAAAAGAAAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGACACATTACATATATAAAGGCGAAATGACTAAAATGACTGGATTTCTCATCAGAAATCATGGCGGTCAGAAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCAGTAGAACATTTTTTTGATGCTGAAAGTAAAGAAGTGTCAACCCAAAATTCTATATTCTGTAAAATTTTCCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAGGAATGCAGGCAAAATAATTCCTTCCCAGAAGAAGGGAAAATAATGCAGCTGCACTAAAAGAAATGCTAAAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGAATTCTTCAGGTGGAAAGGAAGTAATACCAGAAGGAAACTCAAAACTTCAGGAATGAAAGAAGAGCAACAGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AACAGTAAATATATGGATAAATATACTTTTTACTCTTCATAATTTCTTTAAAATATGTATAATGGGTGCAAGCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AACACTGTAACATTGATGGTGGGATTTTTGGTGTATGTAGATAATAATACACATGACAACTGCAACATAAAGGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGGAATGTAAAAGGACCTGTATTGTTGAAAGTTCCCCACATTTTATTTGAAATGATAAAATATTCTTAGCTGGT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTTAAAAGTTAAATACATATATTGGAATCCTTAATCATTAAGAATATTATTAAAAGTATATAGTTATTTTTGGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAGGCGCAGTGGCTCACACCTGTAATCCTAGCACTTTGGGAGGCCAAGGCAGGTGGATCATGAGTCAAGAGATC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GAGACCATCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGAGGTGGTGGTGCG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAAAACTGCTTGAACCCAGGAGGCAGAGGTTGCAATGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCCAAGATCATGCCTTTGCACTCCAGCCTGGTGACGGAGCGAGACTGTCTCAAATACAAAAACAAAACAAAAAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TATATACAGTTATTTTTAAAGCCAAGAGATAGAAAACCAAAAGATATTCAAATAATTCAAAAGAATCCAGGAAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GAGCCAGGCACGGTTGTTCATGTCTGTAATCCCAACAGTTTGAGAGGCCAAGGCAGGCAGATTCTTTGAGCCCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGACTTAGCAGCCTGGGCAACATGGAAAGACCCCATCTCTCCAAAACAAAATATTAAAAAATTAGCCAGACATG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTGATGTGTGCATGTAGTCCCAGCCACCCAGGAGGCTGAGGCAGGAGGATTGCTTGAGCCTGGGAATCAGAGGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGCAGTGAACAGAGATCATACCACTGCACTCCAGCATGAGCAACAGAGCAATTCCCTCTCTCAAAAAAAAAAAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AAAATTCAGAAAAGGAGAAAAAGGAATGAAGAAAAAAAGGAGAAAAACAGAAAACAAATAATAGAATGATAGAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CCAACTATATTAACAGTTACATTAAAGGTAAATGTTCTAGAAACACCATTTAAAAGCCAGTTTGTCATTTTGGT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TAAGAATACAAGACCCAACTATATGCTATATATTAGAAGTCCACTTTAAATGACGTAAGTATGTAAAAAGTAAA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGGATGGAGAAAGATATACCATGTAAAGATTGGCTGAGCACAGTGGCTCATGCCTGTAATCCCAGCACTTTGAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGGCTGAGGCGGGCAGATCACCTGAGGTCAGGAGTTCGAGACTGGCCTGGCCAACATGGTGAAACCCTGTCTCT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ACTAAAAAAAAAAAAAAAGCCAGGTGTGGTGGAGGGTGCCTCCATGAGAGGCTGAGGCAGGAAAATTGCTTGAA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CCCAGGAGGCTCACTAGCCAAGATCCTGCAACTGCACTCCAGCCTGGGTCACAGAGTGAGACTCCATCTCAAAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AAGAAAAGATACACCATGTAATGACTAATCAAAAGGAAGCTGGAATGGGTATATTAATCAGATAAAATAGACTT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CAGAACAAGGAAAATTAACAAGTTTGTAGAGGTAAATTGCATACTAATAAAGTGGTCACTCAAGACATAATAAT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TCTGTATGTATGCAGCTAACAACAGAGTGTCAAAATACTGTACATAAAACAAAAACTAATAAAATAGGAGAAAT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 AGATAATTCTGCAATTATAGATGGGAATTTCAGTTTTCCTCTCAGTAATCAATAAAGCAAGTAGACAGAAAATC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 AGCAAGAATGTAGAAGGCTGGAAAACCATTAGCCAAAAAAGAAAATTCCAGGCTCAGATTTAAGGAATAAATAA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GACCAATTCTATACAATCTCTTACAGAAAATAGAGGAGAAAGAAATAATTTGCAACTCATTTTAAGAGCCAGCA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TTACCCTAACATTACTAGAGAAAGATATTTCAAAAATAAGATCAATATCTTGAACACAGACGCAAAAATCCCCA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 ACAAGATATTGACAAATTGAATACAGCAATATATAAATAAAATTTTCTTTCAGGAATGCAAGGTTGTTCCCACA 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TTTGAAAATCAATGTAGTCCACCATATTAACAGATTGAAGCATAGAAACATGATTTTATGAATAGATGCAGAAA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 ACCCATTTGACACAATTCAACATCCATTCTTTTTATTTATTTTTTTAAGACAGGGTCTCACTGTAGCTCAGTCT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GGAGTGCAGTGGTGGCAATCACGGCTCACTGCAGCCTGGACCTCCTGGGCTCAAGCAGCCCTGCCTCAGCCTCC 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 TAAGTAGCTAGGACTACAAGTGCCCACCACCATGTTTGGCCAATTTTATAACTGTTTATAGAGACAGGGTCTCA 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 CTGTGTTGCCCAGGTTGATCTTGAACTCCTGGGCTCAAGCAATCCTCCCGCTTCAGCCTCCCAAAGTTCTGGGA 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TCACAGGCATGAGCCATTGTGCCCAACCTCTACATTCTTTATTGATAAAACTCAATGGAATATGAATACAAGAG 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 AACTTCCTTAATTTAATAAATTGAACTATAAAAAAAACTTGGCAGCTAACATAATTCTTTTTTTTCTTTTTTGA 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 GATGGAGTTTCACTCTTACTGCCCAGGCTGGAATGCAATGGTGCGATCTCAGCTCACCGCAACCTCCGCCTTCC 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 GGCTTCAAGCGATTTTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGACATGCGCCACCATGCCTGGTTAA 5106
Query 1 -------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATC 55
|..||||||||||||||.|||||||||.||||.||||||||||||||||||||||
Sbjct 5107 TTTTGTATTTTTAGTAGAGACAGGGTTTCTCCATGTTGGTCAGGCTAGTCTTGAACTCCTGACCTCAGGTGATC 5180
Query 56 CGCCCACCTCAGCCTCC--------------------------------------------------------- 72
.||||||||..||||||
Sbjct 5181 TGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTAGCCGCTAACATCATTCTTA 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 ATGGTGAAGGGCTGATTAATTTGCCTAAGATTGGGAAAAAGGCAAAAATGTTCTTAGCATTTCTGTTTAACATC 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 GTGCTAAAAGTCCTGGCCACTGTGATGAGGCAAGAAACAGAAGTAAGAGGCATACAGATTGGAGAAAATAAAAC 5402
Query 73 ----------------- 72
Sbjct 5403 AGAACTTTCTCTATTCA 5419
