Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001743942.1
- Aligned Length:
- 4451
- Identities:
- 63
- Gaps:
- 4379
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AACCAAGCAAAAGTCACTGTCAGGGGACCTCCCACCCACCATACAGGGGAACACTCGGCAGAGCCAGAGGCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCAAGTCCTGCCACCAGCTGGCTGTGAAACTGTGGTACAGCACCTTGTGTCCTGCCACCAGCCGGCTGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACTGGTACAGCACCTTGTCCTCAGGTCCTTGGTTTCCTCACTTGTAAATTCATGGTTCTCCATGGCATCTCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCTTCAACATTATTTTGCATAGAGTCTCAGAAGCTTTAGTGTGAGCGGATGATATGGGCACGAAGCAAGGCAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAGAAGTGGGGGCAACTACTCTGCTTTCTAAAATGCAAGGGAACCGGAAAATCCAGGAGCCGTGCCAAATGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGAGGAACAAATGGAGGAACATCCCAGTCAAGTGACATTCCTAGTGACATTCACCAGAACAGAGTCAAGCTTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGATCCCATGTTCTGTGACTTCCTCTTCACCACGCTTCCTCCACACACGTAGCAGCTCAAGGGTTTCTGATGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGGGTCTATGTTCCCTTTATGAGCTGTAACGCACACCATGAAGGTCTGCGGCTTGGCTATTGAGTCAGTGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCGTGAACCTACTATTAGAAGAAAAACTCTGAATACGTCTGAACGTCAGAAAGAACGAAGTTTGGACACATTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTTAAGAACTGTAACACTCACCCCAAGGGTTTATGGATTCATTCTTGAAATCAGTGAAACCAAAAGCTTTCCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGTTTAACACACAGGGAAATGACTTACTGCAAAGAACCACTCTTCCCCACGAGACTTCGAGAAGACCCGCTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACGGACTGAGTTGTGTCCTCTTAAAATTCAGATGTTGGAGTCCAAACCCCCAGTAACTCAGAGTGTGAACGTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTGAAGAGGTCTTTAAAGAGGTGATGAAGGTCTTTGTCTCTGACAATTTGCCTCTGTGACGTGGATGGGACTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGTCCATTTGGAGCCCTGTCTTCTCCACCTAGGGAGAGAGACCCCATGAGCTCGTCAAGCTCCTTCTGTGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGATCAGAGATCCCACCGTGAGTCCAGCTCCTGGTCCCATGCTCTGGATATATCGGTCCCTGGCAGCGTGAGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTCTGTGTTCACTGTCCCATTTGAGAATTCTAAGTAGAATTCTGAACAGGCTGGAGCAGATTGCCCACCCCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGGACAGATGTTGGCTGGTACTGTTGGTATTCATGGAAGATTCCTTCTGACACTCCCTCCTTCTTTGTAATTGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CATGAACTGGAGCACTGGGCCAATATAAATCATCCAAGGGTGAACACGCTGCACATGGACGGCTCCTCTTTGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTGAAGGGATTCCATCTCTATTTTGCCATGTGCTCCTTCACCCCACTCCCCACCCCCGTCTTTCATTTCTTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCTGGAAAAGATACTTCAACTCACAGGACTGCGATGTTGAAACGGACACCCAAGAGCATCACAGATGGGCCAGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCTGGACCTCTCGGGACAACATTCCTCACGACTTTTAGATAGAAGAGATTAGAGATTTGGGACTGGTGGCAACT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGTAACGTTTTCAGTGTTTGGTAAACAGCCAGGGTCCGGAGCTCTGGGAACAGCCTGATTTAGCTCTTTGTTTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGTTTTGTGTTAGAGGCTCCCAAGAAGCTGATGCAGGGGAAAGAAATTAACAACCATGGCTCATTCACAGCCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCAGCCAAATGGACAGCTCTATAAGACTCAAGCCGACAGCGGAGAGAGTGCAACCAAACAGCCTTGGCCCAGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTCAGAGGAGAACGTTATTCACCCCAACTGCTCTGCATCTGCCTGGATGTCTGCCAAGATCTGTGAGCATTACA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCGTTGGTATGCTTTGGGTGAGGCCTGTGGCTATGGCAACAAGTTGGGAGCAACCCGGTCCCTGGGAATGAGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGTGTCTAAAATCAGGCAGGCGAGGGGCAGGGAGGAGAGGTAAAGGTTGGACTTGCCTGAAGATGGAGCCGTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTATTGTTGTGGGTAAAGCTGCTACCATTAGGGGCTGTTTACAGAGTGGGTGCAGCTCAAGCTGGGAGCATGTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGACTCAGCGACTACGATCAACCTATTGACTTGTTCCCATGAGACAGAGTAAATTAACTGTTGCAGTACTGGTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATGTACCACCAACCTCCTGTGAACCAGCCCTCAGTGAAACATTTATGTGAAAGGCCATGGTGTTCCCATAAGAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGTGCATGTTCTCTCCCTTGACTAACTCTTCAGTATGCCTCATTCTCACGCGCTGGTGTGCAGGAAGGAGTCCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACATGCCCCATTGACAGTCATGCCCTGTATGTGGAAAGTCTTCAGGTAGAGCACTGGGCTCAGGTTTGAAGATG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGAGTTCTAATCCTAGCAAGGCCATTACCTCCCAGTGACCTCATGTCTCGATTTCCTCAACCACAAAACAAAGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CATTGGTGAGCTGACCTCTAAGGCCTCTCCAGTTCTCACCTTCTGTGTCTCTACAGACTGGAGACTAGAAGATT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATGGGCACTTTTATTGAGTCTTCATTTTGTTTCCATTTCTTTGTAGTCATCAGCTGGAGTTGAGGACAAGTTTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AACAATAGATAGGTTTCTTTTTGTCTCTTTTTAAAAAATTTTATTTAAAATAAATGCCAAGTGTAGTGGCTCAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACCTGTAATCCCAGCACTTTGGGGAGGCCAAGGTGGGAGGATTGCTTTTGAGTTTGAGACCAGCCTGGGCAACG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGGTGAGACCCTGTTTGTACAAAAAATTTTAAATTAGCCAGGCATGGTGGCGTGTGCCTATAGTCCTAGCTACT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTGGAGGTAGAGGCAGGAGGATCCCTTGAACCTGGGAGGTTGAGGCCACAGTGAGCTGTGATTGTGCTATTGAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTCTAGCCTGGGCAACAGAGCAAGACCCTGTCTCTTAAAAAAGACTATTTTTTAAGAACACTTTTAGGTTCACA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCGAAATTTGGAGGAAACTTGGCATATGTCATATGCCCCCTGCTCCCATGCATGCACAGCCTCTACCATTAGCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATGTCCCCACTCAAATGGTACCTTTGTTGTAATCAACAACCCTGTACTGACACATCATCATCACCCAAACTCCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TAGTTCACATTAGGTTTCACTCTTGGTGTGGTGTACATTCCATGGGCTTGAACAACTGTATAATGACATTATCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ACCACTGCAGGATCATACAGAGTAGTCTCACTGCCCTAAAACTACTCTGTGCTCCACCTGTTTGTCCCTTCTTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CACTCTAAACTCCTGGCAACAACTGACCTTTTTACTGCCTCGATAGCTTTGCCTTCTTCGGAATGTCATGTAGT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TGAAATCATACATCATGAAGCCTTTTCAGATTGGCTTCATATAGGTTTCCTTCCTTCCTTCCTCCCACCACCTT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CCTTTCTTTCTGTATTCCTAACTCTTGGATGTATTTTCCCCAGCATCATGACTTGATGGGACTTTTGCTAAGAT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGCAATCATAGAAAGTCATAAATCTCTTGTCAGCCTTATTGGCTCACCTCCGAGATGGTTCCAACACTCTTTA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGGCCCACTTTTCCAATCCACAGATTCCCCAGCAGAAGTCCAAGCTGCTGAGCCTCACATCATCTTTTGCACTA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GTAATCTTTACCACTACTTCACTGTAGCATTTGAAAATTTTCATATGAAGCCATAGTTCTGTGTCTTTTTTTTT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TTTTTTTTTTTTTTGGAGACGGAGTCTTAACCTGTTGCCCAGGCTGGAGTGCAGTGGCACAGTCTTAGCTCACT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GCAAGCTCCGCCTCACGGGTTCAAGTGATTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCGCCACC 3848
Query 1 -----------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTC 39
||||||||||.||||||.||.|||||||||||..|||||
Sbjct 3849 ATGCCCAGCTAAATTTGTTGGCATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTC 3922
Query 40 CTGACCTCAGGTGATCCGCCCACCTCAGCCTCC----------------------------------------- 72
||.|||||||||||||.|||..|||||||||||
Sbjct 3923 CTTACCTCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTAAAGGTGTGAGCCACCGCACCTGGCC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 TGAAGCCATAGTTCTTAACCTCAGTTGTGCAATAGAATTATCTGGGGAATTTAAAAATTAGAAAAAACCCATGC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CCTGAAGATTGTGATCTAACTGGTCTTGCGTAGCGCCTGGGCATTGGTATTTTTTAAATGTTTCCCAACTGATA 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CTAATGTGGCCATTCTGCAAGCCACAGTTGAAAGGCTTATTCAAGCATCCTGTTGCTGAATGCATGTCGTCCTT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 ACCACATGACTCTGGAGGTTTTCTTGTATTCTGATGTGGCTGCCCTGTTGAGGCCTGCCCCTTAGAGTGGAGAT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TATCCCCTGCAGTAGGCTGCCTGGAATATGATCCCCAGTGATCCCTGCTTCCTGGTATTCAGGCCCTGGTGTGA 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 TCCCTTTCCCTTGAAGCCTGGGCTGGATTAGTGACTTGCTTCTAACCAACAGCATATGGCAAAAATAAATGTTT 4440
Query 73 ----------- 72
Sbjct 4441 ATTGTTTTAAA 4451
