Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
XR_001744627.2
Aligned Length:
3650
Identities:
65
Gaps:
3578

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGAGCCGTGCGGGCGCCCGCGTACTCACTAGCTGAGGTGGCAGTGGTTCCACCAACATGGAGCTCTCGCAGATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCGGAGCTCATGGGGCTGTCGGTGTTGCTTGGGCTGCTGGCCCTGATGGCGACGGCGGCGGTAGCGCGGGGGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTGCGCGCGGGGGAGGAGAGGAGCGGCCGGCCCGCCTGCCAAAAAGCAAATGGATTTCCACCTGACAAATCTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGGATCCAAGAAGCAGAAACAATATCAGCGGATTCGGAAGGAGAAGCCTCAACAACACAACTTCACCCACCGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCCTGGCTGCAGCTCTGAAGAGCCACAGCGGGAACATATCTTGCATGGACTTTAGCAGCAATGGCAAATACCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGCTACCTGTGCAGATGATCGCACCATCCGCATCTGGAGCACCAAGGACTTCCTGCAGCGAGAGCACCGCAGCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGAGAGCCAACGTGGAGCTGGACCACGCCACCCTGGTGCGCTTCAGCCCTGACTGCAGAGCCTTCATCGTCTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTGGCCAACGGGGACACCCTCCGTGTCTTCAAGATGACCAAGCGGGAGGATGGGGGCTACACCTTCACAGCCAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCCAGAGGACTTCCCTAAAAAGCACAAGGCGCCTGTCATCGACATTGGCATTGCTAACACAGGGAAGTTTATCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGACTGCCTCCAGTGACACCACTGTCCTCATCTGGAGCCTGAAGGGTCAAGTGCTGTCTACCATCAACACCAAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAGATGAACAACACACACGCTGCTGTATCTCCCTGTGGCAGGTTGGAGTGCAATGGCAGGATCTTGGCTCACCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CAACCTCCGTCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCCCAAGTAGCTGGGATTACAGGCATGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCACCATGCCCAGCTAATTTTTTATTTTTAGTAGAGGTGAGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTCGGACCTTAGGTGAGCTGCCCGCCTGGGCCTCCCAAAGTGCTGGGATTACAGGTATGAGCCACCACACCCGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCTTTTTTTTTTTTTTTTTCTGAGACAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCAATCTCAATC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCAGCTCACTGCAACCTCCACCTACCAGGTTCAAGTGATTCTCCCACCTCAGCCTTCCCAGTAGGTGGGACTAC  1184

Query    1  ---------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGG  29
                                                         |||.||||||.||||||.||.||||||||
Sbjct 1185  AGGCATGCGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGG  1258

Query   30  TCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-------------------------------  72
            |||.|||||||||||||||||||||||.||||||||.||||||                               
Sbjct 1259  TCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATGACAGGCGTGAGCCACC  1332

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1333  GCGCCCGGCCAAAATAACTCTTTAAAGGTTTATATTATCCAGATATGAGGATTATCAACTTTCTCAGGAAAGAG  1406

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1407  ATTGAGGGGTTTTACAGGAACAACATGCTCCGAAAATGAAGTTTTAAAGGCTTCTGGGTTGTATGGCAGATTTG  1480

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1481  TAGCCTCGTGTGGCTTCACCCCAGATGTGAAGGTTTGGGAAGTCTGCTTTGGAAAGAAGGGGGAGTTCCAGGAG  1554

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1555  GTGGTGCGAGCCTTCGAACTAAAGGGCCACTCCGCGGCTGTGCACTCGTTTGCTTTCTCCAACGACTCACGGAG  1628

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1629  GATGGCTTCTGTCTCCAAGGATGGTACATGGAAACTGTGGGACACAGATGTGGAATACAAGAAGAAGCAGGACC  1702

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1703  CCTACTTGCTGAAGACAGGCCGCTTTGAAGAGGCGGCGGGTGCCGCGCCGTGCCGCCTGGCCCTCTCCCCCAAC  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  GCCCAGGTCTTGGCCTTGGCCAGTGGCAGTAGTATTCATCTCTACAATACCCGGCGGGGCGAGAAGGAGGAGTG  1850

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1851  CTTTGAGCGGGTCCATGGCGAGTGTATCGCCAACTTGTCCTTTGACATCACTGGCCGCTTTCTGGCCTCCTGTG  1924

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1925  GGGACCGGGCGGTGCGGCTGTTTCACAACACTCCTGGCCACCGAGCCATGGTGGAGGAGATGCAGGGCCACCTG  1998

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1999  AAGCGGGCCTCCAACGAGAGCACCCGCCAGAGGCTGCAGCAGCAGCTGACCCAGGCCCAAGAGACCCTGAAGAG  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  CCTGGGTGCCCTGAAGAAGTGACTCTGGGAGGGCCCGGCGCAGAGGATTGAGGAGGAGGGATCTGGCCTCCTCA  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  TGGCACTGCTGCCATCTTTCCTCCCAGGTGGAAGCCTTTCAGAAGGAGTCTCCTGGTTTTCTTACTGGTGGCCC  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  TGCTTCTTCCCATTGAAACTACTCTTGTCTACTTAGGTCTCTCTCTTCTTGCTGGCTGTGACTCCTCCCTGACT  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  AGTGGCCAAGGTGCTTTTCTTCCTCCCAGGCCCAGTGGGTGGAATCTGTCCCCACCTGGCACTGAGGAGAATGG  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  TAGAGAGGAGAGGAGAGAGAGAGAGAATGTGATTTTTGGCCTTGTGGCAGCACATCCTCACACCCAAAGAAGTT  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  TGTAAATGTTCCAGAACAACCTAGAGAACACCTGAGTACTAAGCAGCAGTTTTGCAAGGATGGGAGACTGGGAT  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  AGCTTCCCATCACAGAACTGTGTTCCATCAAAAAGACACTAAGGGATTTCCTTCTGGGCCTCAGTTCTATTTGT  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  AAGATGGAGAATAATCCTCTCTGTGAACTCCTTGCAAAGATGATATGAGGCTAAGAGAATATCAAGTCCCCAGG  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  TCTGGAAGAAAAGTAGAAAAGAGTAGTACTATTGTCCAATGTCATGAAAGTGGTAAAAGTGGGAACCAGTGTGC  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  TTTGAAACCAAATTAGAAACACATTCCTTGGGAAGGCAAAGTTTTCTGGGACTTGATCATACATTTTATATGGT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  TGGGACTTCTCTCTTCGGGAGATGATATCTTGTTTAAGGAGACCTCTTTTCAGTTCATCAAGTTCATCAGATAT  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  TTGAGTGCCCACTCTGTGCCCAAATAAATATGAGCTGGGGATTAAATACGAATAAGACATGGTTTCTGCCATCA  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  AAGATGGCTGGTGGGAGAGAGAGATACACCCTTATTAAGTGCTTTGTGTTAGTTTATTCATAGCTATTGTTATA  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  TATGTCAAGGCAAGAGAGGACCAGAGCAGGACAGAGGCAATGGGTATTGAAGTTGAAGGGGTACATTTGATAAG  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  AGAGTCGGTATTGAGAAGTTTAAATTTGTGAATTTGAAGGCTGCGTGGGTGTGGCAGGTAAGGGAAATGAGGTA  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  TCTGGGAAGGCTTGAGTGTAGGCAAATTTATTCATCCCAAGTCAAACTCTTGATCTCTCTCACGAAAACTATGA  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  CCCCCCCTGGTTGCCCCTGACCTCTCAATGTTGGAACAAGCCACAACCGTGGAGTTATCCTTGATGACTCCCCA  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  TTCATTATCCCTTCTGTCCCACCACCACAGCTGTCATCTGTTCACCAGAACGTTCTTTTGGTTACACTCCATGT  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  GACATCCTGAGGCTGTTGCTTCTCTCCAGCTTTTCTGTTACCATCCTGGTCCTGGCTACTGTCACCTAGTGGGC  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  CACTATAATATGGCTTCCTAATGGATCTTCCTGCTTCCTCTGTTGCCTCATTACTTTTCTATATAGCAGAATGA  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  TCTTTTGAAAATGTGAACCAGATCACATTATTCCCTAGTTAAAACCCCCCAAGGCTTCCCATCACACTTGGAAT  3626

Query   73  ------------------------  72
                                    
Sbjct 3627  AAAATCCAAAAGAATTTTTCTAAA  3650

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