Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001746225.1
- Aligned Length:
- 3859
- Identities:
- 63
- Gaps:
- 3787
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCTGGGCGCGGGGCTGCGGTGCCCAGAGGCTGCGGCATTAGGGGCTCGGCGCCCCCGACCTTCCGCGTCCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGTGGCGGCGGCGGCGGCGGCGGCGGCGCGGGCGGCATATGATGCTGAGCTGGCTGCTCCAGAATGAACCACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTCTGAGAAGGGGAAGTAGAAACAGCTGGCGCCCTGCCATGGCCTGTGAACCACAGGTGGACCCGGGGGCCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGCCCATTGCCCCCCTCCTCCCCTGGCTGGAGTGCCCTGCCTGGAGGGAGCCCTCCTGGCTGGGGGCAAGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATAGAGAATATGCCAAAATATCCAGTCCTCAGCAGTGCATGGCTGAAACCTGGGATCCTAGAATCCCAGGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAATCTCTCCCACCCCCCAGACCTCCTGGCTGCTGACCAGTGGCTCACAGGGCCTTGTACTGTGGTGCAAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGATCTCGATCCTTTTGTCCAGTTTCTCTACTTGGAACTGCAGGCAGAGCTCCACAATGGCCAGGTCCTCACTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCATCCAGCAGGTCCCGGCTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATATATCATCTACAACTCGAGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAATA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTACTCTACCAGTCAGATGTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCCTGACCTTGACTCTTGTGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGGACCTGAGGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGCAGCTGCCAATGGAGCCCTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGTGGAAGGATGCCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTGTGATTCAGCTTTGGTTTGTCTACTTCGACCTGGAGAACTGTGTGCAGTTTTTGTCTGATCATGTTCAAGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGAAGACTAGCCAAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCTGCAACAGCGGAGGGGCCTGAGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCCACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAGGCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAGTGTTTGGCGGCTACTACATCCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAACTCTCCGAGAATTCCATGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGCGAGGTGACCTAGGGATGAAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAGCCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGATGGCCAATGGGGAGCCCCAGATGTAGAACAATGGTTATGTTTCCCGACATGAACATTGTCCTGGAATGAAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTGATCAGCCACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAACAAGTTTGAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GACCTATTGTTTCATAGACCCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCTTTGTCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CGATTTTGGCTTCATCTCCCACAAAACCCCTTTATGAGTTCACGCTCTTTCCTGGACTGACATACCTATTCCTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCCATTTGTTGGACTCCTATTCATGCTTCAAAGTCCAGCTTTCTTAAGCCCTTCTTTAGGAAGCCTTCCCACAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCCAACCCTGCTGCTCTCTGCCTCCTTTAAATTCTTGATACAGCTGCTGCTTGTTCTGATGTTTTATGGTATT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GATTCTGTTTTCCTGTGTATATGCCAGTTTTTCTAGCTAGACTGTAAACTCCTTAAGGACAGAGACTACACCTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTACTTTTTGTGCATGACCTGGACCTGCTAAGGAAAAAAAAATCTTGTGGATTGATTGCTTTGCCATCCCCACA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCAGCTTTTGCAAATTGCTTTCCAAACTCACTTGAATGATGACATTGCTGTGGACCTGGGTTCTGGACCTGATC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGGTCCTCAGTTTGCCCATCAATATAATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGTGGATTGGATGATTTTTTTTTTTTTAATTGAGATGGAGTCTTGCACTGTCACCCAGGCTGGAGTGCAGTGGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCGATCTTGGCTCACTGCAACCCCCGCCACCTAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGG 2368
Query 1 -----------------------------------------------------ATGGGGTTTCTCCATGTCGGT 21
||||||||||.||||||.||.
Sbjct 2369 GACTACAGGTGTGCACCACTACTCCTGGATATTTTTTTGTGTTTTTAGTAGAGATGGGGTTTCGCCATGTTGGC 2442
Query 22 CAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC----------------------- 72
||.||||||||.|||||||||||||||||||||||.|||.||||.|.||||
Sbjct 2443 CAAGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTACAGACGT 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 GAGGCACCACAACCAGCCTGGATGATTCTTAAGGGCCCTTCTAGGACCAAAGTTCTGGGAATTTCTAGCTTATT 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 CTGCCCCCTCATAGCCCTTGGCCTATCTATCTTTATCCACATGCAGAAACATCTGGCAACCCCACATGGCTGAG 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 ATGACCTGGTCCTAGGACACCCTTGGACAGAAGACTGGCCTACCTAGCAGACCTGGATTTTTCTTCCTGATCTG 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 CTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGATTGTCATTTCGCTTTTTAATAAAGTGG 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 GTCTGGTGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTG 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TGCCAGAGAAGAGAGATCATGGGTATAGACCAGCCCCTGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCTTT 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 GCTCAAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAATGTTGGCTGTGAATGT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 GACCAATAGAAAGAAGCCCGTATTTCTCAGTCAGTCCTAGAACCCCGGTAAGTAATTAACAGAGAATAAAAATG 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TGTTTGTTAAATGACAAAGCAGCAGTTTTTCAATTGTAAGGTCTGCTTGAGAGCCTTTGATGTGTGTTTCTTTT 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CCTGACTTTTCCTTTCTTTAGAATTTTTGATGGTCTCACCTGGTGGGTGGGGCTTTCAGGGTATGCCCACAATG 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TACATTTCTCGGCATCTGTGCCTCAGTTTCCTCATTTATAAAATCCCTATGATCTCTGTCTCACCTACTTTACA 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 GGGTTGCTGTGAAGATCGCATACTACACACAGGAATGCTCATCAGTTTTTAAATTTTATTTAATTTTTATTTAT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TTTTTTTTAAATGTAATTTTTTCAGAGAGATAAGGTCTTGCTATGTTACCCAGCCTAGTCTTGAACTCCTGGCC 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TCAAGTGATCCTCCTGCCTTGGCCTCCCATGCTGCTGGGATTACAGGTGTGAACTACCATGCCCAGCCAGCTCC 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 TAAGTCTTAAGGCTCTGTGTTAGTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGA 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 AGGTGGTAACTCATTGCATGGATTCTAGAGTTCTGTTTATTCTAATCCAAGTTCTTCCACTTAAAAACAATGTT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 CTTCCTCTCATTGAGTCTCATTCCTCATCTATAGGATGGGAATAAGAGCATGTACCTGGCAGGTTGTTGTAAGG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 ATTAAATGGTGTAAAAAAATGTCAAGTGCTTGCAACTTTGAATACCAAACTTGAGTGAAAGCTCAATAAATTGT 3848
Query 73 ----------- 72
Sbjct 3849 TACTTAAAAAA 3859
