Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001746322.1
- Aligned Length:
- 5115
- Identities:
- 63
- Gaps:
- 5043
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACATCGGCCCCAGCCCCTGCCTGGGTCCCCATCCAGGACCCCCTTCCAGTCTCTGCCCCTGGCCTGGCCCCCAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGGCCTCGGCCCTCGTTCCACCCCCTGTCACAAATCCCAGCCCAGGCCCTGTCCCAGCCCCATTCCCAGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGCTTAAGGCCCTGGCTCAACCCCGTCCCTTGCTGCAGTCCCCATCACAGCCCTTCCTTCCATCCCACTCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCTTGTTCAAGCCCCAGTGTCCAGCCCAGCCCAACCCATTATCTCAGCCTTTGCCCTCATCTCTGTGTTTAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAAGTCTCTCCCTCTAGTCCCCCCTATCTCTCATACTCTGCCCCTCTCCCAGCCTAGACTCAAGTCTGGGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCTGCCGCCAGCCCTATTGCTGCTGTTGCTGTTCTCTGTCCTTGGCCCAGGGGCTGGAGGCCTTTTCCTGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGATTACTCCACCTGCTCACCCCGCAAGCTGAGTCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCCACTTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGTTCCTGAGGACACATTCCTGGCTGTTTGGAACCTCATCATCTTCAAGGAGCAAGGGGGAACTTTTGGGGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CACTGCCCAGACCAAAGTGTGACTGTGTATTTCCGGTCCGGGGCACCCCCTGTCATCAATCCCCTGCATACACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTCCCAGGGGACACAGCTGTGCCTGGGGTTTTCTCACTGACCCTCAGCTGGACACTGCCCAACCGCACCTCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCATCTTTAACGTCAGCAGCCCCTTACCTGGGGACTGGTTCTTGGCTGCCCACCTTCCCCAGGCCCACGGCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATCTCTGTCAAGGGTCTCCAGGATGAGTGTCAGTACCTCCTTCAGCCGCAGCTGATTGTCCGGCGTTTGCTGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGTCGCTGTGCTGGTTCCTGGCCGGCCCTCAGAGCAAACCCTCTCCCCACACAATCGCTCAGCCCTGTACAAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTTTGTGCCCAGCTTCACTTACAGGGTTTCAGCACAGCTGGTGTGTGTGGGGGGCCGTGGGGTATCTGCCTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCCTGTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGCACAACTCAAGCTCTGTGGCCTGTGGAGGTGCCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGATGCCAGCTGGAGCTGGCACTGCCCCCCTGGGGGCACTGGGTCTACGTGCGTGTGGAAACATCATCCCGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCCTGGTAGGACCATCCGCTTCCAGCTGTGTGTGCGGTTGCAAGAGTGCCCACAGCCCGGCCTGCTCCGAGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGGTCCCTGGAGCTGCCATGAACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGAACCCCTGCGGAGGGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACGAGCTGGACACCTTCTCTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTTTTTCTGTTCTGAGAATGGAGAGCTCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGTCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGATAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGTTCTATCATGCCTGTGACCAGCCAGGCAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CGTGGTTTTCTGCATCATGGACTACGATGTGCTGCAGTTCTGTGATTTCCTGGGCTCCTTAATGTCCGTGTGGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCACTGTCATTGCCATGGCTCGTTTACAGCCCGTGGTCAAGCAGGTGCTGTATTTGCTGGGAGCTATGCTGCTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCCATGGCTCTGCAGCTTGACCGACATGGACTCTGGAACCTGCTTGGACCCAGTCTCTTCGCCCTGGGGATCTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGCCACAGCCTGGACAGTACGCAGCGTCCGCCGCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGCTTTTCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACTTGTGCCCTGGCAGCCTTATTGCAGGCAGTGCCGTCCTGCTTTATGCTTTTGTGGAGACCCGGGACAACTAC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTCTACATTCACAGCATTTGGCATATGCTCATTGCGGGCAGTGTGGGCTTCCTGCTGCCCCCTCGTGCCAAGAC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGACCACGGGGTCCCATCTGGAGCCCGGGCCCGGGGCTGTGGTTACCAGCTATGCATCAACGAGCAGGAGGAGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGGGCCTCGTGGGCCCAGGAGGGGCCACTGTCAGCAGCATCTGTGCCAGCTGAGAGGGGCTTTGGGCCTGGCCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGAGGGGATATGAATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGCTGTATTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTTGAGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGACTGGAGCCTATGCAGGCACAGAGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCCTCAGGACCAAGGAGTCCCTCCTGCAGGTGTGGAGCCTTTCCTGGGATGCAGAGCCTTCCCAAGACATGGAT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAGGAGGTGGAGTCTATCTTGGGGAAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGGCT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGTCTGGGTGGCTGGTATCCTC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GTTTGATACAGGTGGAGTCTGTGTGTCTCCAGTGATTGATTGGTTCAGAATGGTTCTGTGATGCCTTTTTTCCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CCTGGGGTCAGGGGTGTGGGGAAGTGGGGAAAGAGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CCGGAGGCTTTTGTCACACCCTGTACACAGTCTGATCCCGCTCATCTGGGCCCTGCATTCATTTCTAAACAGTT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TCTAATGCCTATTCCCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTATGTATGTATACGTATGCTGAGATGATTTAAATCAGTGAGACAGACTTTCCTTATGATGCCCACACCCAACA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CAGAAGGAAGCCGAGGTCCCAGGAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGTAACTTCTGTTTTGAGCCCCCATTTTTCCTGAGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TTTCCATGAGGGTCATAGCTGAGTTCTGAGGGTCTTACATAATGCCAAGAAGTTGGGAGAGCATTCTCACTGAT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CACCAGTGTCCATACTTCATCCATCCCCGGGATTTCCATCATTCCATCTGGTCCCCAGTCAGAGGTCCAGACAG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTCATCTGGGATGCAGAGAGATTTCTTGTTCCCATTTGCATTACTCTCTCAGTCCTAAGGTTCTCTCTGCCACT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTTGGCTATGCAGACACACCTTGAAGCTGTTTCTG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CTCTGGGTTTTGACAGACAAGGCATGAGTTGCTGCATCTGTTAAAACTGCAAATCTATCTTGGCCTGGGGTGTG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GAGCTCAGGGACTCTTCCTTTTGGGACCCTCTGTGTCAGTATTCTCACTACATCCTCTCCTCCTCTCTCTTCTT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TCCCCCTTTCGTTAATATTGGAGGTGAGGAAGCCTTACTTAATGTTTTCTCCTGAATCTTTTTTTTTTTGAGAC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GGAGTTTTGCTCTTGTTGCCCAGGCTGGAATGCAATGGTGCGATCTCAGCTCACTGCAACCTCTGCCTCCCGGG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TTCAAGTGATTCTCCTGTCTCAGCCTCCCGAGTAGCTGGGATTAGAGGTGTGCACCACCAAGCCCAGCTAATTT 4440
Query 1 -----------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCG 57
|||||||||||||||||.||||||||||.|||..||||||.|.|||||||||||||.
Sbjct 4441 TTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGCTCTCAAACTCCCGGCCTCAGGTGATCCA 4514
Query 58 CCCACCTCAGCCTCC----------------------------------------------------------- 72
|||.||||.||||||
Sbjct 4515 CCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGTTGTGAGCCACCGCGCCTGGCCTCTCCTGAATCTTTTATC 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 TATGCCTTAAGCCTTTTCTGTTCCCTTCAGGACCTAGGCTTTTGAAACCCAAAAGCCAGGAAAACATGCCTTTG 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 TTATCTGCTTTCTGCAATCACGTCTCTTCCATGGGGCACTGAGCAGAGAATGGTGTGGCCAAGTGAGTAGTGAG 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 AAGCAGTGAGGAGGTGTGAGCTAGGTGTCTGTTCCCATTTTAGAAAATACTGTTCCTACATCAGAAATACCACA 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 TTAAGACGTATAGAGCCAGGTCACTGGGATGCTTGAACCCAAATAGCTGGGATTCTGGACAGAGTCAGCAGAGT 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 ACAGAAGGCTCTGAAGTGGGAGACGGAGCTGGGGTGCATCCCTCCCAGTGAGGAGGGGTCATGAGGGGCGTCTG 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 GGAAGAGGGACATTTGAACTAGGATTAGCTGAGTTGCCATGATGCTAAGATAATGGGAGAGTGTTCTTTGTGGT 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 CACCAGTGTCCACATGGCATCCCTTCCCTGAGATTTTCATCACTCCCTGTGGTCTTCAGTCAGTAAAGCTCTTA 5106
Query 73 --------- 72
Sbjct 5107 GAACACTTG 5115
